RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 N4BP2Q86UW6 1770 aaPredicted RBP26.42■■□□□ 1.82
PDZRN3-202ENST00000308537 BRCA1P38398 1863 aaKnown RBP26.42■■□□□ 1.82
PDZRN3-202ENST00000308537 DDR1Q08345 913 aa26.41■■□□□ 1.82
PDZRN3-202ENST00000308537 BCL2L12Q9HB09 334 aa26.41■■□□□ 1.82
PDZRN3-202ENST00000308537 NRXN2Q9P2S2 1712 aa26.39■■□□□ 1.82
PDZRN3-202ENST00000308537 KDM3BQ7LBC6 1761 aa26.39■■□□□ 1.82
PDZRN3-202ENST00000308537 BTBD11A6QL63 1104 aa26.39■■□□□ 1.82
PDZRN3-202ENST00000308537 EIF5P55010 431 aaKnown RBP26.39■■□□□ 1.82
PDZRN3-202ENST00000308537 AFDNP55196 1824 aaKnown RBP26.38■■□□□ 1.81
PDZRN3-202ENST00000308537 TM4SF1P30408 202 aa26.38■■□□□ 1.81
PDZRN3-202ENST00000308537 PELP1Q8IZL8 1130 aaKnown RBP26.38■■□□□ 1.81
PDZRN3-202ENST00000308537 FMNL2Q96PY5 1086 aa26.38■■□□□ 1.81
PDZRN3-202ENST00000308537 NARFQ9UHQ1 456 aa26.38■■□□□ 1.81
PDZRN3-202ENST00000308537 MYBBP1AQ9BQG0 1328 aaKnown RBP26.38■■□□□ 1.81
PDZRN3-202ENST00000308537 USPL1Q5W0Q7 1092 aa26.37■■□□□ 1.81
PDZRN3-202ENST00000308537 SCN7AQ01118 1682 aa26.37■■□□□ 1.81
PDZRN3-202ENST00000308537 RTF1Q92541 710 aaKnown RBP26.36■■□□□ 1.81
PDZRN3-202ENST00000308537 PRAMEF22A3QJZ6 481 aa26.35■■□□□ 1.81
PDZRN3-202ENST00000308537 STARD3NLO95772 234 aa26.35■■□□□ 1.81
PDZRN3-202ENST00000308537 CANXP27824 592 aaKnown RBP26.35■■□□□ 1.81
PDZRN3-202ENST00000308537 NFE2L2Q16236 605 aa26.35■■□□□ 1.81
PDZRN3-202ENST00000308537 POLRMTO00411 1230 aaKnown RBP26.34■■□□□ 1.81
PDZRN3-202ENST00000308537 ZNF784Q8NCA9 323 aaPredicted RBP26.34■■□□□ 1.81
PDZRN3-202ENST00000308537 TEX13AQ9BXU3 409 aaPredicted RBP26.34■■□□□ 1.81
PDZRN3-202ENST00000308537 GRIN3BO60391 1043 aa26.33■■□□□ 1.81
PDZRN3-202ENST00000308537 USP16Q9Y5T5 823 aa26.33■■□□□ 1.81
PDZRN3-202ENST00000308537 PARP3Q9Y6F1 533 aa26.33■■□□□ 1.81
PDZRN3-202ENST00000308537 A1BGP04217 495 aa26.32■■□□□ 1.8
PDZRN3-202ENST00000308537 TGFB2P61812 414 aa26.32■■□□□ 1.8
PDZRN3-202ENST00000308537 BCORQ6W2J9 1755 aa26.31■■□□□ 1.8
PDZRN3-202ENST00000308537 ZPR1O75312 459 aa26.31■■□□□ 1.8
PDZRN3-202ENST00000308537 KCNA3P22001 575 aa26.31■■□□□ 1.8
PDZRN3-202ENST00000308537 NFIXQ14938 502 aa26.31■■□□□ 1.8
PDZRN3-202ENST00000308537 TAF7Q15545 349 aaPredicted RBP26.31■■□□□ 1.8
PDZRN3-202ENST00000308537 PRKRIP1Q9H875 184 aaPredicted RBP26.31■■□□□ 1.8
PDZRN3-202ENST00000308537 WWC3Q9ULE0 1092 aa26.31■■□□□ 1.8
PDZRN3-202ENST00000308537 LAMB4A4D0S4 1761 aa26.3■■□□□ 1.8
PDZRN3-202ENST00000308537 IL6STP40189 918 aaPredicted RBP26.3■■□□□ 1.8
PDZRN3-202ENST00000308537 THUMPD2Q9BTF0 503 aaKnown RBP26.3■■□□□ 1.8
PDZRN3-202ENST00000308537 MIS18AQ9NYP9 233 aa26.29■■□□□ 1.8
PDZRN3-202ENST00000308537 A0A0G2JLW4 131 aa26.28■■□□□ 1.8
PDZRN3-202ENST00000308537 DPEP1P16444 411 aa26.28■■□□□ 1.8
PDZRN3-202ENST00000308537 ARFGEF1Q9Y6D6 1849 aa26.27■■□□□ 1.8
PDZRN3-202ENST00000308537 SNRPA1P09661 255 aaKnown RBP26.26■■□□□ 1.79
PDZRN3-202ENST00000308537 NBPF26B4DH59 902 aa26.25■■□□□ 1.79
PDZRN3-202ENST00000308537 PIP4K2AP48426 406 aaPredicted RBP26.25■■□□□ 1.79
PDZRN3-202ENST00000308537 NBPF10Q6P3W6 841 aaKnown RBP26.25■■□□□ 1.79
PDZRN3-202ENST00000308537 NBPF15Q8N660 670 aa26.25■■□□□ 1.79
PDZRN3-202ENST00000308537 PNNQ9H307 717 aaKnown RBP26.25■■□□□ 1.79
PDZRN3-202ENST00000308537 ADCY9O60503 1353 aa26.24■■□□□ 1.79
PDZRN3-202ENST00000308537 ANKRD31Q8N7Z5 1873 aa26.24■■□□□ 1.79
PDZRN3-202ENST00000308537 MAPK8IP3Q9UPT6 1336 aa26.24■■□□□ 1.79
PDZRN3-202ENST00000308537 A0A087WZG4 1122 aa26.24■■□□□ 1.79
PDZRN3-202ENST00000308537 NEFMP07197 916 aa26.24■■□□□ 1.79
PDZRN3-202ENST00000308537 TBC1D2BQ9UPU7 963 aa26.24■■□□□ 1.79
PDZRN3-202ENST00000308537 DLEC1Q9Y238 1755 aa26.23■■□□□ 1.79
PDZRN3-202ENST00000308537 CARMIL3Q8ND23 1372 aa26.23■■□□□ 1.79
PDZRN3-202ENST00000308537 CAMTA2O94983 1202 aa26.23■■□□□ 1.79
PDZRN3-202ENST00000308537 ZEB1P37275 1124 aaPredicted RBP26.23■■□□□ 1.79
PDZRN3-202ENST00000308537 TMPOP42166 694 aaKnown RBP26.22■■□□□ 1.79
PDZRN3-202ENST00000308537 EIF4A1P60842 406 aaKnown RBP26.21■■□□□ 1.79
PDZRN3-202ENST00000308537 TBC1D9BQ66K14 1250 aa26.21■■□□□ 1.79
PDZRN3-202ENST00000308537 SERPINB2P05120 415 aa26.2■■□□□ 1.78
PDZRN3-202ENST00000308537 GIGYF1O75420 1035 aaPredicted RBP26.19■■□□□ 1.78
PDZRN3-202ENST00000308537 CHRNA5P30532 468 aa26.19■■□□□ 1.78
PDZRN3-202ENST00000308537 RIPK4P57078 832 aa26.19■■□□□ 1.78
PDZRN3-202ENST00000308537 PNISRQ8TF01 805 aaKnown RBP26.19■■□□□ 1.78
PDZRN3-202ENST00000308537 CCDC146Q8IYE0 955 aa26.18■■□□□ 1.78
PDZRN3-202ENST00000308537 ADAMTS8Q9UP79 889 aa26.18■■□□□ 1.78
PDZRN3-202ENST00000308537 BCS1LQ9Y276 419 aa26.18■■□□□ 1.78
PDZRN3-202ENST00000308537 ZNF330Q9Y3S2 320 aaPredicted RBP26.18■■□□□ 1.78
PDZRN3-202ENST00000308537 DZIP3Q86Y13 1208 aaKnown RBP26.16■■□□□ 1.78
PDZRN3-202ENST00000308537 RRP7AQ9Y3A4 280 aaKnown RBP26.16■■□□□ 1.78
PDZRN3-202ENST00000308537 COL11A2P13942 1736 aaPredicted RBP26.16■■□□□ 1.78
PDZRN3-202ENST00000308537 BICDL1Q6ZP65 573 aa26.15■■□□□ 1.78
PDZRN3-202ENST00000308537 TRIM35Q9UPQ4 493 aa26.15■■□□□ 1.78
PDZRN3-202ENST00000308537 ATP10DQ9P241 1426 aa26.14■■□□□ 1.78
PDZRN3-202ENST00000308537 RUNDC1Q96C34 613 aa26.14■■□□□ 1.78
PDZRN3-202ENST00000308537 PIM2Q9P1W9 311 aa26.14■■□□□ 1.78
PDZRN3-202ENST00000308537 PRR5LQ6MZQ0 368 aa26.13■■□□□ 1.77
PDZRN3-202ENST00000308537 RGL2O15211 777 aa26.1■■□□□ 1.77
PDZRN3-202ENST00000308537 WDR43Q15061 677 aaKnown RBP eCLIP26.1■■□□□ 1.77
PDZRN3-202ENST00000308537 CCDC184Q52MB2 194 aa26.1■■□□□ 1.77
PDZRN3-202ENST00000308537 CLEC4GQ6UXB4 293 aa26.1■■□□□ 1.77
PDZRN3-202ENST00000308537 BABAM1Q9NWV8 329 aa26.1■■□□□ 1.77
PDZRN3-202ENST00000308537 SBF1O95248 1867 aa26.1■■□□□ 1.77
PDZRN3-202ENST00000308537 NUP98P52948 1817 aa26.09■■□□□ 1.77
PDZRN3-202ENST00000308537 DALRD3Q5D0E6 543 aaKnown RBP26.09■■□□□ 1.77
PDZRN3-202ENST00000308537 LRP10Q7Z4F1 713 aa26.09■■□□□ 1.77
PDZRN3-202ENST00000308537 TSPYL4Q9UJ04 414 aa26.09■■□□□ 1.77
PDZRN3-202ENST00000308537 LMOD3Q0VAK6 560 aa26.08■■□□□ 1.77
PDZRN3-202ENST00000308537 NEUROD2Q15784 382 aa26.07■■□□□ 1.76
PDZRN3-202ENST00000308537 HLFQ16534 295 aa26.07■■□□□ 1.76
PDZRN3-202ENST00000308537 CCDC24Q8N4L8 307 aa26.07■■□□□ 1.76
PDZRN3-202ENST00000308537 CHL1O00533 1208 aa26.06■■□□□ 1.76
PDZRN3-202ENST00000308537 PDIA6Q15084 440 aa26.06■■□□□ 1.76
PDZRN3-202ENST00000308537 SETDB2Q96T68 719 aa26.06■■□□□ 1.76
PDZRN3-202ENST00000308537 NPM2Q86SE8 214 aaKnown RBP26.05■■□□□ 1.76
PDZRN3-202ENST00000308537 BRIP1Q9BX63 1249 aa26.05■■□□□ 1.76
PDZRN3-202ENST00000308537 ZNF316A6NFI3 1004 aaPredicted RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms