RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 CCDC174Q6PII3 467 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 DDX46Q7L014 1031 aaKnown RBP9.06□□□□□ -0.96
RSF1-201ENST00000308488 CACNA2D3Q8IZS8 1091 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 PPP6R1Q9UPN7 881 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 DYNC1I2Q13409 638 aaKnown RBP9.06□□□□□ -0.96
RSF1-201ENST00000308488 MPHOSPH9Q99550 1183 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 MIA2Q96PC5 1412 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 CTAGE15A4D2H0 777 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 CTAGE8P0CG41 777 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 PSMA5P28066 241 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 CTAGE6Q86UF2 777 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 CTAGE4Q8IX94 777 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 C8orf34Q49A92 452 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 KANK4Q5T7N3 995 aaPredicted RBP9.06□□□□□ -0.96
RSF1-201ENST00000308488 ATP8B1O43520 1251 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 ZFXP17010 805 aaPredicted RBP9.06□□□□□ -0.96
RSF1-201ENST00000308488 DNAI1Q9UI46 699 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 TACC1O75410 805 aa9.06□□□□□ -0.96
RSF1-201ENST00000308488 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.06□□□□□ -0.96
RSF1-201ENST00000308488 NAA15Q9BXJ9 866 aaKnown RBP9.05□□□□□ -0.96
RSF1-201ENST00000308488 PPP2R3AQ06190 1150 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 ERICH3Q5RHP9 1530 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 FKBP5Q13451 457 aaPredicted RBP9.05□□□□□ -0.96
RSF1-201ENST00000308488 LRRFIP1Q32MZ4 808 aaKnown RBP9.05□□□□□ -0.96
RSF1-201ENST00000308488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.05□□□□□ -0.962e-6■■■□□ 15.1
RSF1-201ENST00000308488 NDUFAB1O14561 156 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 SLMAPQ14BN4 828 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 BRD3Q15059 726 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 STK38Q15208 465 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 WHAMMQ8TF30 809 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 ATP2C2O75185 946 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 CFAP100Q494V2 611 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 SAAL1Q96ER3 474 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 PANK3Q9H999 370 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.05□□□□□ -0.961e-6■■■■■ 100.4
RSF1-201ENST00000308488 NAP1L3Q99457 506 aaPredicted RBP9.05□□□□□ -0.96
RSF1-201ENST00000308488 RBSNQ9H1K0 784 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 GCOM1H8Y6P7 765 aaPredicted RBP9.05□□□□□ -0.96
RSF1-201ENST00000308488 MYZAPP0CAP1 466 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 DDX41Q9UJV9 622 aaKnown RBP9.05□□□□□ -0.96
RSF1-201ENST00000308488 TMEM51Q9NW97 253 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 TPX2Q9ULW0 747 aaKnown RBP9.05□□□□□ -0.96
RSF1-201ENST00000308488 CPLX1O14810 134 aa9.05□□□□□ -0.96
RSF1-201ENST00000308488 GNL3LQ9NVN8 582 aaKnown RBP9.05□□□□□ -0.96
RSF1-201ENST00000308488 POLA1P09884 1462 aaPredicted RBP9.04□□□□□ -0.96
RSF1-201ENST00000308488 TRIM29Q14134 588 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 PPFIBP2Q8ND30 876 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 TBC1D31Q96DN5 1066 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 PDRG1Q9NUG6 133 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 VCX3BQ9H321 246 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 VCX3AQ9NNX9 186 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 IBTKQ9P2D0 1353 aaPredicted RBP9.04□□□□□ -0.96
RSF1-201ENST00000308488 NPM1P06748 294 aaKnown RBP eCLIP9.04□□□□□ -0.96
RSF1-201ENST00000308488 MX1P20591 662 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 LIG3P49916 1009 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 MAATS1Q7Z4T9 603 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 RIPOR2Q9Y4F9 1068 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 ANKRD1Q15327 319 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 TAF4BQ92750 862 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 DDX12PQ92771 950 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 TADA2BQ86TJ2 420 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 TMC6Q7Z403 805 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 MAGEC2Q9UBF1 373 aaPredicted RBP9.04□□□□□ -0.96
RSF1-201ENST00000308488 MRFAP1Q9Y605 127 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 RAD51AP2Q09MP3 1159 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 SH2B1Q9NRF2 756 aaPredicted RBP9.04□□□□□ -0.96
RSF1-201ENST00000308488 SOGA1O94964 1423 aa9.04□□□□□ -0.96
RSF1-201ENST00000308488 SART3Q15020 963 aaKnown RBP9.03□□□□□ -0.96
RSF1-201ENST00000308488 ZNF165P49910 485 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 EVCP57679 992 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 RWDD2BP57060 319 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 TTC14Q96N46 770 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 BCL2L13Q9BXK5 485 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 LARSQ9P2J5 1176 aaKnown RBP9.03□□□□□ -0.96
RSF1-201ENST00000308488 RABGAP1Q9Y3P9 1069 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 PTGS1P23219 599 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 CCDC129Q6ZRS4 1044 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 CCDC12Q8WUD4 166 aaPredicted RBP9.03□□□□□ -0.96
RSF1-201ENST00000308488 LRRD1A4D1F6 860 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 DHX16O60231 1041 aaKnown RBP9.03□□□□□ -0.96
RSF1-201ENST00000308488 STIM2Q9P246 746 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 RGL3Q3MIN7 710 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 PRDM2Q13029 1718 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 ARMCX6Q7L4S7 300 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 SLC24A3Q9HC58 644 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 CHCHD3Q9NX63 227 aaKnown RBP9.03□□□□□ -0.96
RSF1-201ENST00000308488 ACTN2P35609 894 aa9.03□□□□□ -0.96
RSF1-201ENST00000308488 SAFBQ15424 915 aaKnown RBP eCLIP9.03□□□□□ -0.96
RSF1-201ENST00000308488 CDCA7LQ96GN5 454 aa9.02□□□□□ -0.96
RSF1-201ENST00000308488 RANBP1P43487 201 aa9.02□□□□□ -0.96
RSF1-201ENST00000308488 PPFIA1Q13136 1202 aa9.02□□□□□ -0.96
RSF1-201ENST00000308488 CCDC57Q2TAC2 916 aa9.02□□□□□ -0.96
RSF1-201ENST00000308488 SLFNL1Q499Z3 407 aa9.02□□□□□ -0.96
RSF1-201ENST00000308488 PAFAH1B1P43034 410 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 MAP7D1Q3KQU3 841 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 FAM71BQ8TC56 605 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 ARID3CA6NKF2 412 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 ME1P48163 572 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 HNRNPH2P55795 449 aaKnown RBP9.02□□□□□ -0.97
RSF1-201ENST00000308488 SESN3P58005 492 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms