RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 IL17RAQ96F46 866 aa17.37■□□□□ 0.37
LRRFIP1-203ENST00000308482 FUCA2Q9BTY2 467 aa17.37■□□□□ 0.37
LRRFIP1-203ENST00000308482 F13A1P00488 732 aa17.36■□□□□ 0.37
LRRFIP1-203ENST00000308482 TTC14Q96N46 770 aa17.36■□□□□ 0.37
LRRFIP1-203ENST00000308482 DLC1Q96QB1 1528 aa17.36■□□□□ 0.37
LRRFIP1-203ENST00000308482 DNM1Q05193 864 aaKnown RBP17.35■□□□□ 0.37
LRRFIP1-203ENST00000308482 KIAA1524Q8TCG1 905 aa17.35■□□□□ 0.37
LRRFIP1-203ENST00000308482 STK31Q9BXU1 1019 aa17.35■□□□□ 0.37
LRRFIP1-203ENST00000308482 PRR36Q9H6K5 1346 aa17.35■□□□□ 0.37
LRRFIP1-203ENST00000308482 RIMBP3CA6NJZ7 1639 aa17.35■□□□□ 0.37
LRRFIP1-203ENST00000308482 RIMBP3BA6NNM3 1639 aa17.35■□□□□ 0.37
LRRFIP1-203ENST00000308482 RIMBP3Q9UFD9 1639 aa17.35■□□□□ 0.37
LRRFIP1-203ENST00000308482 RIOK3O14730 519 aaKnown RBP17.34■□□□□ 0.37
LRRFIP1-203ENST00000308482 GNAI3P08754 354 aa17.34■□□□□ 0.37
LRRFIP1-203ENST00000308482 MAP3K19Q56UN5 1328 aa17.34■□□□□ 0.37
LRRFIP1-203ENST00000308482 METP08581 1390 aa17.34■□□□□ 0.37
LRRFIP1-203ENST00000308482 RTF1Q92541 710 aaKnown RBP17.34■□□□□ 0.37
LRRFIP1-203ENST00000308482 SPG7Q9UQ90 795 aa17.34■□□□□ 0.37
LRRFIP1-203ENST00000308482 RAD50Q92878 1312 aa17.34■□□□□ 0.37
LRRFIP1-203ENST00000308482 SMC3Q9UQE7 1217 aa17.34■□□□□ 0.37
LRRFIP1-203ENST00000308482 LETM1O95202 739 aaPredicted RBP17.33■□□□□ 0.36
LRRFIP1-203ENST00000308482 CCDC83Q8IWF9 413 aa17.33■□□□□ 0.36
LRRFIP1-203ENST00000308482 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.36
LRRFIP1-203ENST00000308482 CHMP3Q9Y3E7 222 aa17.33■□□□□ 0.36
LRRFIP1-203ENST00000308482 SGSM2O43147 1006 aa17.33■□□□□ 0.36
LRRFIP1-203ENST00000308482 LIMCH1Q9UPQ0 1083 aa17.33■□□□□ 0.36
LRRFIP1-203ENST00000308482 RIMS1Q86UR5 1692 aaKnown RBP17.33■□□□□ 0.36
LRRFIP1-203ENST00000308482 CWC27Q6UX04 472 aaKnown RBP17.32■□□□□ 0.36
LRRFIP1-203ENST00000308482 LSG1Q9H089 658 aaKnown RBP17.32■□□□□ 0.36
LRRFIP1-203ENST00000308482 USP44Q9H0E7 712 aa17.32■□□□□ 0.36
LRRFIP1-203ENST00000308482 NRKQ7Z2Y5 1582 aa17.32■□□□□ 0.36
LRRFIP1-203ENST00000308482 UTP14CQ5TAP6 766 aaKnown RBP17.32■□□□□ 0.36
LRRFIP1-203ENST00000308482 PI4K2BQ8TCG2 481 aa17.32■□□□□ 0.36
LRRFIP1-203ENST00000308482 MON2Q7Z3U7 1717 aa17.32■□□□□ 0.36
LRRFIP1-203ENST00000308482 C3P01024 1663 aa17.32■□□□□ 0.36
LRRFIP1-203ENST00000308482 SURF6O75683 361 aaKnown RBP17.31■□□□□ 0.36
LRRFIP1-203ENST00000308482 CASTP20810 708 aaKnown RBP17.31■□□□□ 0.36
LRRFIP1-203ENST00000308482 GJB2P29033 226 aa17.31■□□□□ 0.36
LRRFIP1-203ENST00000308482 PDCL2Q8N4E4 241 aa17.31■□□□□ 0.36
LRRFIP1-203ENST00000308482 U2AF2P26368 475 aaKnown RBP eCLIP17.31■□□□□ 0.362e-6■■■□□ 15.9
LRRFIP1-203ENST00000308482 IGSF3O75054 1194 aa17.3■□□□□ 0.36
LRRFIP1-203ENST00000308482 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.3■□□□□ 0.36
LRRFIP1-203ENST00000308482 TTC21BQ7Z4L5 1316 aa17.3■□□□□ 0.36
LRRFIP1-203ENST00000308482 MTMR6Q9Y217 621 aa17.3■□□□□ 0.36
LRRFIP1-203ENST00000308482 SOS1Q07889 1333 aaPredicted RBP17.3■□□□□ 0.36
LRRFIP1-203ENST00000308482 VPS37CA5D8V6 355 aaPredicted RBP17.29■□□□□ 0.36
LRRFIP1-203ENST00000308482 UBTFL1P0CB47 393 aaPredicted RBP17.29■□□□□ 0.36
LRRFIP1-203ENST00000308482 PTGS1P23219 599 aa17.29■□□□□ 0.36
LRRFIP1-203ENST00000308482 ADCK5Q3MIX3 580 aa17.29■□□□□ 0.36
LRRFIP1-203ENST00000308482 PPP1R42Q7Z4L9 355 aa17.29■□□□□ 0.36
LRRFIP1-203ENST00000308482 SETD1AO15047 1707 aaKnown RBP17.29■□□□□ 0.36
LRRFIP1-203ENST00000308482 PEAK1Q9H792 1746 aa17.29■□□□□ 0.36
LRRFIP1-203ENST00000308482 CAMK4Q16566 473 aa17.29■□□□□ 0.36
LRRFIP1-203ENST00000308482 A2ML1A8K2U0 1454 aa17.29■□□□□ 0.36
LRRFIP1-203ENST00000308482 FAM173BQ6P4H8 233 aa17.28■□□□□ 0.36
LRRFIP1-203ENST00000308482 RHPN1Q8TCX5 695 aa17.28■□□□□ 0.36
LRRFIP1-203ENST00000308482 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
LRRFIP1-203ENST00000308482 NEO1Q92859 1461 aa17.28■□□□□ 0.36
LRRFIP1-203ENST00000308482 ST3GAL1Q11201 340 aa17.28■□□□□ 0.36
LRRFIP1-203ENST00000308482 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
LRRFIP1-203ENST00000308482 LUZP1Q86V48 1076 aa17.28■□□□□ 0.36
LRRFIP1-203ENST00000308482 NECAB1Q8N987 351 aa17.28■□□□□ 0.36
LRRFIP1-203ENST00000308482 CHAF1AQ13111 956 aaPredicted RBP17.27■□□□□ 0.36
LRRFIP1-203ENST00000308482 FERMT3Q86UX7 667 aa17.27■□□□□ 0.36
LRRFIP1-203ENST00000308482 SSH3Q8TE77 659 aa17.27■□□□□ 0.36
LRRFIP1-203ENST00000308482 PHAXQ9H814 394 aaKnown RBP17.27■□□□□ 0.36
LRRFIP1-203ENST00000308482 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
LRRFIP1-203ENST00000308482 ACEP12821 1306 aa17.27■□□□□ 0.36
LRRFIP1-203ENST00000308482 AOX1Q06278 1338 aa17.27■□□□□ 0.36
LRRFIP1-203ENST00000308482 PTH1RQ03431 593 aa17.27■□□□□ 0.35
LRRFIP1-203ENST00000308482 LRMPQ12912 555 aa17.27■□□□□ 0.35
LRRFIP1-203ENST00000308482 DIAPH3Q9NSV4 1193 aa17.27■□□□□ 0.35
LRRFIP1-203ENST00000308482 COL9A3Q14050 684 aaPredicted RBP17.26■□□□□ 0.35
LRRFIP1-203ENST00000308482 JAKMIP1Q96N16 626 aaKnown RBP17.26■□□□□ 0.35
LRRFIP1-203ENST00000308482 CCDC192P0DO97 292 aa17.26■□□□□ 0.35
LRRFIP1-203ENST00000308482 ANKRD7Q92527 254 aa17.26■□□□□ 0.35
LRRFIP1-203ENST00000308482 BCL11BQ9C0K0 894 aaPredicted RBP17.26■□□□□ 0.35
LRRFIP1-203ENST00000308482 RICTORQ6R327 1708 aa17.26■□□□□ 0.35
LRRFIP1-203ENST00000308482 XRN1Q8IZH2 1706 aaKnown RBP17.26■□□□□ 0.35
LRRFIP1-203ENST00000308482 AKAP12Q02952 1782 aa17.25■□□□□ 0.35
LRRFIP1-203ENST00000308482 LIG1P18858 919 aa17.25■□□□□ 0.35
LRRFIP1-203ENST00000308482 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
LRRFIP1-203ENST00000308482 TTC6Q86TZ1 520 aa17.25■□□□□ 0.35
LRRFIP1-203ENST00000308482 CKAP2LQ8IYA6 745 aa17.25■□□□□ 0.35
LRRFIP1-203ENST00000308482 ITSN1Q15811 1721 aa17.25■□□□□ 0.35
LRRFIP1-203ENST00000308482 SRGAP3O43295 1099 aa17.25■□□□□ 0.35
LRRFIP1-203ENST00000308482 EPB41L2O43491 1005 aaKnown RBP17.25■□□□□ 0.35
LRRFIP1-203ENST00000308482 NRBP1Q9UHY1 535 aa17.25■□□□□ 0.35
LRRFIP1-203ENST00000308482 ARHGEF10O15013 1369 aa17.25■□□□□ 0.35
LRRFIP1-203ENST00000308482 CNTROBQ8N137 903 aa17.24■□□□□ 0.35
LRRFIP1-203ENST00000308482 C16orf45Q96MC5 204 aaPredicted RBP17.24■□□□□ 0.35
LRRFIP1-203ENST00000308482 PDRG1Q9NUG6 133 aa17.24■□□□□ 0.35
LRRFIP1-203ENST00000308482 RGPD1P0DJD0 1748 aa17.24■□□□□ 0.35
LRRFIP1-203ENST00000308482 OVOS2A0A0J9YW53 1432 aa17.24■□□□□ 0.35
LRRFIP1-203ENST00000308482 OVOS2Q6IE36 1432 aa17.24■□□□□ 0.35
LRRFIP1-203ENST00000308482 NAA30Q147X3 362 aaPredicted RBP17.24■□□□□ 0.35
LRRFIP1-203ENST00000308482 ME3Q16798 604 aa17.24■□□□□ 0.35
LRRFIP1-203ENST00000308482 CCDC186Q7Z3E2 898 aa17.24■□□□□ 0.35
LRRFIP1-203ENST00000308482 EYA1Q99502 592 aa17.24■□□□□ 0.35
LRRFIP1-203ENST00000308482 MRVI1Q9Y6F6 885 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms