RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 SIRT2Q8IXJ6 389 aa19.6■□□□□ 0.73
CCDC8-201ENST00000307522 MED14O60244 1454 aa19.6■□□□□ 0.73
CCDC8-201ENST00000307522 KCNQ3O43525 872 aa19.59■□□□□ 0.73
CCDC8-201ENST00000307522 LARP6Q9BRS8 491 aaKnown RBP19.59■□□□□ 0.73
CCDC8-201ENST00000307522 PRIMPOLQ96LW4 560 aa19.58■□□□□ 0.73
CCDC8-201ENST00000307522 HMGN5P82970 282 aaKnown RBP19.58■□□□□ 0.72
CCDC8-201ENST00000307522 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.58■□□□□ 0.72
CCDC8-201ENST00000307522 V9GYY5 206 aaPredicted RBP19.58■□□□□ 0.72
CCDC8-201ENST00000307522 NEK4P51957 841 aa19.57■□□□□ 0.72
CCDC8-201ENST00000307522 TSHZ3Q63HK5 1081 aa19.57■□□□□ 0.72
CCDC8-201ENST00000307522 AATKQ6ZMQ8 1374 aa19.57■□□□□ 0.72
CCDC8-201ENST00000307522 AXIN2Q9Y2T1 843 aa19.57■□□□□ 0.72
CCDC8-201ENST00000307522 USP26Q9BXU7 913 aa19.57■□□□□ 0.72
CCDC8-201ENST00000307522 OVOS2A0A0J9YW53 1432 aa19.57■□□□□ 0.72
CCDC8-201ENST00000307522 OVOS2Q6IE36 1432 aa19.57■□□□□ 0.72
CCDC8-201ENST00000307522 ZNF853P0CG23 659 aa19.56■□□□□ 0.72
CCDC8-201ENST00000307522 LMOD3Q0VAK6 560 aa19.56■□□□□ 0.72
CCDC8-201ENST00000307522 IL16Q14005 1332 aa19.56■□□□□ 0.72
CCDC8-201ENST00000307522 IL17REQ8NFR9 667 aa19.56■□□□□ 0.72
CCDC8-201ENST00000307522 CHMP3Q9Y3E7 222 aa19.56■□□□□ 0.72
CCDC8-201ENST00000307522 CDK12Q9NYV4 1490 aaPredicted RBP19.55■□□□□ 0.72
CCDC8-201ENST00000307522 DIP2AQ14689 1571 aa19.55■□□□□ 0.72
CCDC8-201ENST00000307522 MEIS3Q99687 375 aa19.55■□□□□ 0.72
CCDC8-201ENST00000307522 FLT4P35916 1363 aa19.55■□□□□ 0.72
CCDC8-201ENST00000307522 ST18O60284 1047 aa19.55■□□□□ 0.72
CCDC8-201ENST00000307522 IRX5P78411 483 aaPredicted RBP19.55■□□□□ 0.72
CCDC8-201ENST00000307522 ZBTB7BO15156 539 aaPredicted RBP19.54■□□□□ 0.72
CCDC8-201ENST00000307522 NPHP1O15259 732 aa19.54■□□□□ 0.72
CCDC8-201ENST00000307522 C16orf45Q96MC5 204 aaPredicted RBP19.54■□□□□ 0.72
CCDC8-201ENST00000307522 PIP4K2AP48426 406 aaPredicted RBP19.54■□□□□ 0.72
CCDC8-201ENST00000307522 KRT28Q7Z3Y7 464 aa19.54■□□□□ 0.72
CCDC8-201ENST00000307522 ST7Q9NRC1 585 aa19.54■□□□□ 0.72
CCDC8-201ENST00000307522 ADGRB2O60241 1585 aa19.54■□□□□ 0.72
CCDC8-201ENST00000307522 GCP02774 474 aa19.53■□□□□ 0.72
CCDC8-201ENST00000307522 FKBP5Q13451 457 aaPredicted RBP19.53■□□□□ 0.72
CCDC8-201ENST00000307522 PLEKHM2Q8IWE5 1019 aa19.53■□□□□ 0.72
CCDC8-201ENST00000307522 ZNF592Q92610 1267 aa19.53■□□□□ 0.72
CCDC8-201ENST00000307522 CEP170BQ9Y4F5 1589 aaPredicted RBP19.53■□□□□ 0.72
CCDC8-201ENST00000307522 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.52■□□□□ 0.72
CCDC8-201ENST00000307522 CHL1O00533 1208 aa19.52■□□□□ 0.72
CCDC8-201ENST00000307522 AP5Z1O43299 807 aa19.52■□□□□ 0.72
CCDC8-201ENST00000307522 ZFP91Q96JP5 570 aaPredicted RBP19.52■□□□□ 0.72
CCDC8-201ENST00000307522 UPF3BQ9BZI7 483 aaKnown RBP19.52■□□□□ 0.72
CCDC8-201ENST00000307522 TTC21AQ8NDW8 1320 aa19.52■□□□□ 0.72
CCDC8-201ENST00000307522 CHAF1AQ13111 956 aaPredicted RBP19.52■□□□□ 0.72
CCDC8-201ENST00000307522 USP48Q86UV5 1035 aa19.52■□□□□ 0.72
CCDC8-201ENST00000307522 KCNF1Q9H3M0 494 aa19.52■□□□□ 0.72
CCDC8-201ENST00000307522 PRAMEF22A3QJZ6 481 aa19.51■□□□□ 0.71
CCDC8-201ENST00000307522 CSB-PGBD3P0DP91 1061 aa19.51■□□□□ 0.71
CCDC8-201ENST00000307522 TMX3Q96JJ7 454 aa19.51■□□□□ 0.71
CCDC8-201ENST00000307522 NLRP2Q9NX02 1062 aa19.51■□□□□ 0.71
CCDC8-201ENST00000307522 ARHGAP23Q9P227 1491 aa19.51■□□□□ 0.71
CCDC8-201ENST00000307522 GIMAP6Q6P9H5 292 aa19.51■□□□□ 0.71
CCDC8-201ENST00000307522 IPO4Q8TEX9 1081 aaKnown RBP19.51■□□□□ 0.71
CCDC8-201ENST00000307522 GNAT3A8MTJ3 354 aa19.5■□□□□ 0.71
CCDC8-201ENST00000307522 PHAXQ9H814 394 aaKnown RBP19.5■□□□□ 0.71
CCDC8-201ENST00000307522 ALDH1L2Q3SY69 923 aa19.5■□□□□ 0.71
CCDC8-201ENST00000307522 SBNO1A3KN83 1393 aa19.5■□□□□ 0.71
CCDC8-201ENST00000307522 ATF3P18847 181 aa19.49■□□□□ 0.71
CCDC8-201ENST00000307522 SDSP20132 328 aa19.49■□□□□ 0.71
CCDC8-201ENST00000307522 GTF2F1P35269 517 aaKnown RBP eCLIP19.49■□□□□ 0.715e-6■■■■□ 22
CCDC8-201ENST00000307522 ZNF530Q6P9A1 599 aaPredicted RBP19.49■□□□□ 0.71
CCDC8-201ENST00000307522 MBD3O95983 291 aa19.49■□□□□ 0.71
CCDC8-201ENST00000307522 PEAK1Q9H792 1746 aa19.49■□□□□ 0.71
CCDC8-201ENST00000307522 NCBP1Q09161 790 aaKnown RBP19.49■□□□□ 0.71
CCDC8-201ENST00000307522 LRMPQ12912 555 aa19.49■□□□□ 0.71
CCDC8-201ENST00000307522 ITSN1Q15811 1721 aa19.48■□□□□ 0.71
CCDC8-201ENST00000307522 SLIT1O75093 1534 aa19.48■□□□□ 0.71
CCDC8-201ENST00000307522 CNPY2Q9Y2B0 182 aa19.48■□□□□ 0.71
CCDC8-201ENST00000307522 CT47B1P0C2W7 299 aaPredicted RBP19.47■□□□□ 0.71
CCDC8-201ENST00000307522 SLC39A6Q13433 755 aa19.47■□□□□ 0.71
CCDC8-201ENST00000307522 FIBPO43427 364 aa19.47■□□□□ 0.71
CCDC8-201ENST00000307522 CWC22Q9HCG8 908 aaKnown RBP19.47■□□□□ 0.71
CCDC8-201ENST00000307522 PTGS1P23219 599 aa19.47■□□□□ 0.71
CCDC8-201ENST00000307522 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
CCDC8-201ENST00000307522 ANKRD26Q9UPS8 1709 aa19.46■□□□□ 0.71
CCDC8-201ENST00000307522 ANKRD24Q8TF21 1146 aa19.46■□□□□ 0.71
CCDC8-201ENST00000307522 GCC1Q96CN9 775 aa19.46■□□□□ 0.71
CCDC8-201ENST00000307522 TTC22Q5TAA0 569 aa19.46■□□□□ 0.71
CCDC8-201ENST00000307522 PALD1Q9ULE6 856 aa19.46■□□□□ 0.71
CCDC8-201ENST00000307522 NPHP4O75161 1426 aaPredicted RBP19.46■□□□□ 0.71
CCDC8-201ENST00000307522 IGSF1Q8N6C5 1336 aa19.46■□□□□ 0.71
CCDC8-201ENST00000307522 USP31Q70CQ4 1352 aa19.45■□□□□ 0.7
CCDC8-201ENST00000307522 AIMP1Q12904 312 aaKnown RBP19.45■□□□□ 0.7
CCDC8-201ENST00000307522 EXOC6BQ9Y2D4 811 aa19.45■□□□□ 0.7
CCDC8-201ENST00000307522 STK31Q9BXU1 1019 aa19.45■□□□□ 0.7
CCDC8-201ENST00000307522 INTS3Q68E01 1043 aaKnown RBP19.44■□□□□ 0.7
CCDC8-201ENST00000307522 ANKRD7Q92527 254 aa19.44■□□□□ 0.7
CCDC8-201ENST00000307522 PTCH1Q13635 1447 aa19.44■□□□□ 0.7
CCDC8-201ENST00000307522 HAP1P54257 671 aaPredicted RBP19.44■□□□□ 0.7
CCDC8-201ENST00000307522 KIAA1524Q8TCG1 905 aa19.44■□□□□ 0.7
CCDC8-201ENST00000307522 SYAP1Q96A49 352 aaPredicted RBP19.44■□□□□ 0.7
CCDC8-201ENST00000307522 MSH6P52701 1360 aa19.43■□□□□ 0.7
CCDC8-201ENST00000307522 SLFN14P0C7P3 912 aa19.43■□□□□ 0.7
CCDC8-201ENST00000307522 TEFQ10587 303 aa19.43■□□□□ 0.7
CCDC8-201ENST00000307522 API5Q9BZZ5 524 aaKnown RBP19.43■□□□□ 0.7
CCDC8-201ENST00000307522 DIAPH3Q9NSV4 1193 aa19.43■□□□□ 0.7
CCDC8-201ENST00000307522 HDGFL1Q5TGJ6 251 aa19.43■□□□□ 0.7
CCDC8-201ENST00000307522 IP6K1Q92551 441 aa19.43■□□□□ 0.7
CCDC8-201ENST00000307522 MON2Q7Z3U7 1717 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms