RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 TRPC5Q9UL62 973 aaPredicted RBP22.15■■□□□ 1.14
KRT28-201ENST00000306658 KDM2BQ8NHM5 1336 aa22.15■■□□□ 1.14
KRT28-201ENST00000306658 BCL9O00512 1426 aa22.15■■□□□ 1.14
KRT28-201ENST00000306658 C5P01031 1676 aa22.15■■□□□ 1.14
KRT28-201ENST00000306658 F6X3S4 739 aa22.14■■□□□ 1.14
KRT28-201ENST00000306658 SYTL4Q96C24 671 aaPredicted RBP22.14■■□□□ 1.14
KRT28-201ENST00000306658 PCDHB15Q9Y5E8 787 aa22.14■■□□□ 1.14
KRT28-201ENST00000306658 USP16Q9Y5T5 823 aa22.14■■□□□ 1.14
KRT28-201ENST00000306658 A0A0G2JS52 829 aa22.14■■□□□ 1.13
KRT28-201ENST00000306658 PTCD1O75127 700 aaKnown RBP22.14■■□□□ 1.13
KRT28-201ENST00000306658 MYT1Q01538 1121 aa22.14■■□□□ 1.13
KRT28-201ENST00000306658 PRIM1P49642 420 aaKnown RBP22.13■■□□□ 1.13
KRT28-201ENST00000306658 KCPQ6ZWJ8 1503 aa22.13■■□□□ 1.13
KRT28-201ENST00000306658 RWDD1Q9H446 243 aaPredicted RBP22.13■■□□□ 1.13
KRT28-201ENST00000306658 ANXA1P04083 346 aa22.12■■□□□ 1.13
KRT28-201ENST00000306658 PDIA6Q15084 440 aa22.12■■□□□ 1.13
KRT28-201ENST00000306658 ATG3Q9NT62 314 aa22.12■■□□□ 1.13
KRT28-201ENST00000306658 ASAP1Q9ULH1 1129 aa22.12■■□□□ 1.13
KRT28-201ENST00000306658 PROSER3Q2NL68 480 aa22.11■■□□□ 1.13
KRT28-201ENST00000306658 VSIG10Q8N0Z9 540 aa22.11■■□□□ 1.13
KRT28-201ENST00000306658 TEX13AQ9BXU3 409 aaPredicted RBP22.11■■□□□ 1.13
KRT28-201ENST00000306658 ATRNO75882 1429 aa22.11■■□□□ 1.13
KRT28-201ENST00000306658 ERBB4Q15303 1308 aa22.11■■□□□ 1.13
KRT28-201ENST00000306658 DDX58O95786 925 aaKnown RBP22.11■■□□□ 1.13
KRT28-201ENST00000306658 PXDNLA1KZ92 1463 aa22.1■■□□□ 1.13
KRT28-201ENST00000306658 DOT1LQ8TEK3 1739 aa22.1■■□□□ 1.13
KRT28-201ENST00000306658 IGHDP01880 384 aa22.1■■□□□ 1.13
KRT28-201ENST00000306658 LAMB4A4D0S4 1761 aa22.1■■□□□ 1.13
KRT28-201ENST00000306658 GLI3P10071 1580 aa22.09■■□□□ 1.13
KRT28-201ENST00000306658 PI4KAP2A4QPH2 592 aa22.09■■□□□ 1.13
KRT28-201ENST00000306658 PI4KAP1Q8N8J0 262 aa22.09■■□□□ 1.13
KRT28-201ENST00000306658 DNAAF4Q8WXU2 420 aa22.09■■□□□ 1.13
KRT28-201ENST00000306658 MYL6BP14649 208 aa22.08■■□□□ 1.13
KRT28-201ENST00000306658 THSD7AQ9UPZ6 1657 aa22.08■■□□□ 1.12
KRT28-201ENST00000306658 HDAC1Q13547 482 aaPredicted RBP22.07■■□□□ 1.12
KRT28-201ENST00000306658 KSR2Q6VAB6 950 aa22.07■■□□□ 1.12
KRT28-201ENST00000306658 RBM42Q9BTD8 480 aaKnown RBP22.07■■□□□ 1.12
KRT28-201ENST00000306658 QTRT2Q9H974 415 aaKnown RBP22.07■■□□□ 1.12
KRT28-201ENST00000306658 ONECUT3O60422 494 aaPredicted RBP22.07■■□□□ 1.12
KRT28-201ENST00000306658 ACSBG1Q96GR2 724 aa22.07■■□□□ 1.12
KRT28-201ENST00000306658 AIMP1Q12904 312 aaKnown RBP22.05■■□□□ 1.12
KRT28-201ENST00000306658 SRCIN1Q9C0H9 1055 aa22.05■■□□□ 1.12
KRT28-201ENST00000306658 MAP3K2Q9Y2U5 619 aa22.04■■□□□ 1.12
KRT28-201ENST00000306658 ADCY9O60503 1353 aa22.04■■□□□ 1.12
KRT28-201ENST00000306658 STARD3NLO95772 234 aa22.04■■□□□ 1.12
KRT28-201ENST00000306658 GNAI3P08754 354 aa22.04■■□□□ 1.12
KRT28-201ENST00000306658 COPS6Q7L5N1 327 aa22.04■■□□□ 1.12
KRT28-201ENST00000306658 XAGE3Q8WTP9 111 aa22.04■■□□□ 1.12
KRT28-201ENST00000306658 MEIS3Q99687 375 aa22.04■■□□□ 1.12
KRT28-201ENST00000306658 N4BP2Q86UW6 1770 aaPredicted RBP22.04■■□□□ 1.12
KRT28-201ENST00000306658 LRP10Q7Z4F1 713 aa22.03■■□□□ 1.12
KRT28-201ENST00000306658 C1orf115Q9H7X2 142 aa22.03■■□□□ 1.12
KRT28-201ENST00000306658 ATP10DQ9P241 1426 aa22.03■■□□□ 1.12
KRT28-201ENST00000306658 BEND3Q5T5X7 828 aa22.02■■□□□ 1.12
KRT28-201ENST00000306658 RIC3Q7Z5B4 369 aa22.02■■□□□ 1.12
KRT28-201ENST00000306658 ANKRD13DQ6ZTN6 518 aa22.01■■□□□ 1.11
KRT28-201ENST00000306658 SMARCC1Q92922 1105 aaPredicted RBP22.01■■□□□ 1.11
KRT28-201ENST00000306658 NBPF26B4DH59 902 aa22.01■■□□□ 1.11
KRT28-201ENST00000306658 A1BGP04217 495 aa22.01■■□□□ 1.11
KRT28-201ENST00000306658 PIP4K2AP48426 406 aaPredicted RBP22.01■■□□□ 1.11
KRT28-201ENST00000306658 NBPF14Q5TI25 921 aa22.01■■□□□ 1.11
KRT28-201ENST00000306658 NBPF10Q6P3W6 841 aaKnown RBP22.01■■□□□ 1.11
KRT28-201ENST00000306658 DNAJC10Q8IXB1 793 aa22.01■■□□□ 1.11
KRT28-201ENST00000306658 RPAP2Q8IXW5 612 aaPredicted RBP22.01■■□□□ 1.11
KRT28-201ENST00000306658 NBPF15Q8N660 670 aa22.01■■□□□ 1.11
KRT28-201ENST00000306658 ALDH1L1O75891 902 aa22■■□□□ 1.11
KRT28-201ENST00000306658 ZNF772Q68DY9 489 aaPredicted RBP22■■□□□ 1.11
KRT28-201ENST00000306658 SEPT12Q8IYM1 358 aa22■■□□□ 1.11
KRT28-201ENST00000306658 GNAI2P04899 355 aa21.99■■□□□ 1.11
KRT28-201ENST00000306658 KCNQ2O43526 872 aa21.98■■□□□ 1.11
KRT28-201ENST00000306658 NEXNQ0ZGT2 675 aa21.98■■□□□ 1.11
KRT28-201ENST00000306658 LINS1Q8NG48 757 aa21.98■■□□□ 1.11
KRT28-201ENST00000306658 USP44Q9H0E7 712 aa21.98■■□□□ 1.11
KRT28-201ENST00000306658 SLC4A9Q96Q91 983 aa21.98■■□□□ 1.11
KRT28-201ENST00000306658 UBTFL1P0CB47 393 aaPredicted RBP21.97■■□□□ 1.11
KRT28-201ENST00000306658 ANKRD44Q8N8A2 993 aa21.97■■□□□ 1.11
KRT28-201ENST00000306658 PLBD2Q8NHP8 589 aa21.97■■□□□ 1.11
KRT28-201ENST00000306658 CYP19A1P11511 503 aaPredicted RBP21.96■■□□□ 1.11
KRT28-201ENST00000306658 METTL22Q9BUU2 404 aaPredicted RBP21.96■■□□□ 1.11
KRT28-201ENST00000306658 CEP85Q6P2H3 762 aa21.95■■□□□ 1.1
KRT28-201ENST00000306658 SIRT2Q8IXJ6 389 aa21.95■■□□□ 1.1
KRT28-201ENST00000306658 SMC5Q8IY18 1101 aa21.95■■□□□ 1.1
KRT28-201ENST00000306658 FBXO41Q8TF61 875 aa21.95■■□□□ 1.1
KRT28-201ENST00000306658 GCC1Q96CN9 775 aa21.95■■□□□ 1.1
KRT28-201ENST00000306658 HDAC5Q9UQL6 1122 aa21.95■■□□□ 1.1
KRT28-201ENST00000306658 PALLDQ8WX93 1383 aa21.95■■□□□ 1.1
KRT28-201ENST00000306658 LOC102724428A0A0B4J2F2 783 aa21.95■■□□□ 1.1
KRT28-201ENST00000306658 SIK1P57059 783 aa21.95■■□□□ 1.1
KRT28-201ENST00000306658 ATP6V1AP38606 617 aa21.94■■□□□ 1.1
KRT28-201ENST00000306658 IBTKQ9P2D0 1353 aaPredicted RBP21.94■■□□□ 1.1
KRT28-201ENST00000306658 HMMRO75330 724 aa21.93■■□□□ 1.1
KRT28-201ENST00000306658 C9orf78Q9NZ63 289 aaPredicted RBP21.93■■□□□ 1.1
KRT28-201ENST00000306658 CWF19L2Q2TBE0 894 aaKnown RBP21.92■■□□□ 1.1
KRT28-201ENST00000306658 RBM6P78332 1123 aaKnown RBP21.91■■□□□ 1.1
KRT28-201ENST00000306658 FAM182BQ5T319 152 aa21.91■■□□□ 1.1
KRT28-201ENST00000306658 MYD88Q99836 296 aa21.91■■□□□ 1.1
KRT28-201ENST00000306658 PDZRN3Q9UPQ7 1066 aa21.91■■□□□ 1.1
KRT28-201ENST00000306658 TJP1Q07157 1748 aa21.91■■□□□ 1.1
KRT28-201ENST00000306658 TTLL7Q6ZT98 887 aa21.91■■□□□ 1.1
KRT28-201ENST00000306658 LRRFIP2Q9Y608 721 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms