RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SMTNL1A8MU46 457 aa18.69■□□□□ 0.58
USP42-201ENST00000306177 FERMT3Q86UX7 667 aa18.69■□□□□ 0.58
USP42-201ENST00000306177 TRMT112Q9UI30 125 aaKnown RBP18.69■□□□□ 0.58
USP42-201ENST00000306177 MAP3K12Q12852 859 aa18.68■□□□□ 0.58
USP42-201ENST00000306177 TXLNBQ8N3L3 684 aa18.68■□□□□ 0.58
USP42-201ENST00000306177 NAPBQ9H115 298 aa18.68■□□□□ 0.58
USP42-201ENST00000306177 DEF6Q9H4E7 631 aa18.68■□□□□ 0.58
USP42-201ENST00000306177 PIK3R4Q99570 1358 aa18.68■□□□□ 0.58
USP42-201ENST00000306177 PATL2C9JE40 543 aaKnown RBP18.68■□□□□ 0.58
USP42-201ENST00000306177 PARD3Q8TEW0 1356 aa18.68■□□□□ 0.58
USP42-201ENST00000306177 TESK2Q96S53 571 aa18.68■□□□□ 0.58
USP42-201ENST00000306177 WWC2Q6AWC2 1192 aa18.67■□□□□ 0.58
USP42-201ENST00000306177 MAP3K2Q9Y2U5 619 aa18.67■□□□□ 0.58
USP42-201ENST00000306177 ANKRD18BA2A2Z9 1011 aa18.67■□□□□ 0.58
USP42-201ENST00000306177 BMP2KLQ5H9B9 411 aa18.67■□□□□ 0.58
USP42-201ENST00000306177 SCAND2PQ9GZW5 306 aaPredicted RBP18.67■□□□□ 0.58
USP42-201ENST00000306177 SLC5A1P13866 664 aa18.67■□□□□ 0.58
USP42-201ENST00000306177 EVI5LQ96CN4 794 aa18.67■□□□□ 0.58
USP42-201ENST00000306177 CCDC196A0A1B0GTZ2 297 aa18.66■□□□□ 0.58
USP42-201ENST00000306177 ECHDC1Q9NTX5 307 aa18.66■□□□□ 0.58
USP42-201ENST00000306177 MPNDQ8N594 471 aa18.66■□□□□ 0.58
USP42-201ENST00000306177 SYCE3A1L190 88 aa18.66■□□□□ 0.58
USP42-201ENST00000306177 CHRNA2Q15822 529 aa18.66■□□□□ 0.58
USP42-201ENST00000306177 CCDC112Q8NEF3 446 aa18.66■□□□□ 0.58
USP42-201ENST00000306177 EIF2AK4Q9P2K8 1649 aaKnown RBP18.66■□□□□ 0.58
USP42-201ENST00000306177 MINDY4BA8MYZ0 360 aa18.66■□□□□ 0.58
USP42-201ENST00000306177 LIMCH1Q9UPQ0 1083 aa18.66■□□□□ 0.58
USP42-201ENST00000306177 KIF21AQ7Z4S6 1674 aa18.65■□□□□ 0.58
USP42-201ENST00000306177 EXOC5O00471 708 aa18.65■□□□□ 0.58
USP42-201ENST00000306177 SSBP05455 408 aaKnown RBP eCLIP18.65■□□□□ 0.58
USP42-201ENST00000306177 USP5P45974 858 aa18.65■□□□□ 0.58
USP42-201ENST00000306177 TEX13AQ9BXU3 409 aaPredicted RBP18.65■□□□□ 0.58
USP42-201ENST00000306177 PIBF1Q8WXW3 757 aa18.65■□□□□ 0.58
USP42-201ENST00000306177 ZBTB3Q9H5J0 574 aa18.65■□□□□ 0.58
USP42-201ENST00000306177 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.65■□□□□ 0.583e-6■■■■■ 84.9
USP42-201ENST00000306177 PI4KAP2A4QPH2 592 aa18.65■□□□□ 0.58
USP42-201ENST00000306177 PI4KAP1Q8N8J0 262 aa18.65■□□□□ 0.58
USP42-201ENST00000306177 ARHGAP45Q92619 1136 aa18.64■□□□□ 0.58
USP42-201ENST00000306177 TMOD2Q9NZR1 351 aa18.64■□□□□ 0.58
USP42-201ENST00000306177 ZNF213O14771 459 aa18.64■□□□□ 0.57
USP42-201ENST00000306177 PUS7Q96PZ0 661 aaKnown RBP18.63■□□□□ 0.57
USP42-201ENST00000306177 TBC1D2Q9BYX2 928 aa18.63■□□□□ 0.57
USP42-201ENST00000306177 PDCL3Q9H2J4 239 aa18.63■□□□□ 0.57
USP42-201ENST00000306177 POLR3DP05423 398 aaPredicted RBP18.63■□□□□ 0.57
USP42-201ENST00000306177 TBC1D9Q6ZT07 1266 aa18.63■□□□□ 0.57
USP42-201ENST00000306177 C8orf76Q96K31 380 aa18.63■□□□□ 0.57
USP42-201ENST00000306177 MKNK2Q9HBH9 465 aa18.63■□□□□ 0.57
USP42-201ENST00000306177 ABCC2Q92887 1545 aa18.63■□□□□ 0.57
USP42-201ENST00000306177 POLR3AO14802 1390 aaPredicted RBP18.63■□□□□ 0.57
USP42-201ENST00000306177 ZNF76P36508 570 aa18.63■□□□□ 0.57
USP42-201ENST00000306177 FILIP1Q7Z7B0 1213 aa18.63■□□□□ 0.57
USP42-201ENST00000306177 DISP1Q96F81 1524 aa18.62■□□□□ 0.57
USP42-201ENST00000306177 CAMK4Q16566 473 aa18.62■□□□□ 0.57
USP42-201ENST00000306177 NOM1Q5C9Z4 860 aaKnown RBP18.62■□□□□ 0.57
USP42-201ENST00000306177 DZIP1Q86YF9 867 aaKnown RBP18.62■□□□□ 0.57
USP42-201ENST00000306177 ARHGEF12Q9NZN5 1544 aa18.62■□□□□ 0.57
USP42-201ENST00000306177 CWC25Q9NXE8 425 aaPredicted RBP18.62■□□□□ 0.57
USP42-201ENST00000306177 ANKIB1Q9P2G1 1089 aa18.62■□□□□ 0.57
USP42-201ENST00000306177 POLKQ9UBT6 870 aa18.62■□□□□ 0.57
USP42-201ENST00000306177 SEC63Q9UGP8 760 aaKnown RBP18.62■□□□□ 0.57
USP42-201ENST00000306177 CCDC183Q5T5S1 534 aa18.62■□□□□ 0.57
USP42-201ENST00000306177 PPP1R42Q7Z4L9 355 aa18.62■□□□□ 0.57
USP42-201ENST00000306177 RNF41Q9H4P4 317 aaPredicted RBP18.62■□□□□ 0.57
USP42-201ENST00000306177 IGHDP01880 384 aa18.61■□□□□ 0.57
USP42-201ENST00000306177 CTCFLQ8NI51 663 aaPredicted RBP18.61■□□□□ 0.57
USP42-201ENST00000306177 ANXA1P04083 346 aa18.61■□□□□ 0.57
USP42-201ENST00000306177 GPTP24298 496 aa18.61■□□□□ 0.57
USP42-201ENST00000306177 CCDC181Q5TID7 509 aa18.61■□□□□ 0.57
USP42-201ENST00000306177 IQCA1Q86XH1 822 aa18.61■□□□□ 0.57
USP42-201ENST00000306177 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
USP42-201ENST00000306177 SNRPA1P09661 255 aaKnown RBP18.6■□□□□ 0.57
USP42-201ENST00000306177 EIF4A2Q14240 407 aaKnown RBP18.6■□□□□ 0.57
USP42-201ENST00000306177 TTC22Q5TAA0 569 aa18.6■□□□□ 0.57
USP42-201ENST00000306177 NGLY1Q96IV0 654 aa18.6■□□□□ 0.57
USP42-201ENST00000306177 SLC12A7Q9Y666 1083 aa18.6■□□□□ 0.57
USP42-201ENST00000306177 MSH6P52701 1360 aa18.6■□□□□ 0.57
USP42-201ENST00000306177 ESPNB1AK53 854 aa18.6■□□□□ 0.57
USP42-201ENST00000306177 ATP5J2-PTCD1G3V325 749 aa18.6■□□□□ 0.57
USP42-201ENST00000306177 MPHOSPH10O00566 681 aaKnown RBP18.6■□□□□ 0.57
USP42-201ENST00000306177 HDAC1Q13547 482 aaPredicted RBP18.6■□□□□ 0.57
USP42-201ENST00000306177 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
USP42-201ENST00000306177 UBE3BQ7Z3V4 1068 aa18.6■□□□□ 0.57
USP42-201ENST00000306177 DNMT1P26358 1616 aaKnown RBP18.59■□□□□ 0.57
USP42-201ENST00000306177 ERLIN2O94905 339 aa18.59■□□□□ 0.57
USP42-201ENST00000306177 CFAP100Q494V2 611 aa18.59■□□□□ 0.57
USP42-201ENST00000306177 ANO10Q9NW15 660 aa18.59■□□□□ 0.57
USP42-201ENST00000306177 TTF1Q15361 905 aaPredicted RBP18.59■□□□□ 0.57
USP42-201ENST00000306177 FAM177A1Q8N128 213 aaPredicted RBP18.59■□□□□ 0.57
USP42-201ENST00000306177 PHAXQ9H814 394 aaKnown RBP18.59■□□□□ 0.57
USP42-201ENST00000306177 PZPP20742 1482 aa18.59■□□□□ 0.57
USP42-201ENST00000306177 DCAF8L1A6NGE4 600 aa18.59■□□□□ 0.57
USP42-201ENST00000306177 SSFA2P28290 1259 aa18.59■□□□□ 0.57
USP42-201ENST00000306177 CWC15Q9P013 229 aaKnown RBP18.59■□□□□ 0.57
USP42-201ENST00000306177 NPHP3Q7Z494 1330 aa18.58■□□□□ 0.57
USP42-201ENST00000306177 IL27Q8NEV9 243 aa18.58■□□□□ 0.57
USP42-201ENST00000306177 RANBP6O60518 1105 aaKnown RBP18.58■□□□□ 0.56
USP42-201ENST00000306177 PRKCSHP14314 528 aaPredicted RBP18.58■□□□□ 0.56
USP42-201ENST00000306177 CRACR2BQ8N4Y2 399 aaPredicted RBP18.58■□□□□ 0.56
USP42-201ENST00000306177 GOLIM4O00461 696 aa18.57■□□□□ 0.56
USP42-201ENST00000306177 EIF5P55010 431 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms