RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 STK26Q9P289 416 aa6.7□□□□□ -1.34
VPS50-202ENST00000305866 SMARCA5O60264 1052 aaPredicted RBP6.7□□□□□ -1.34
VPS50-202ENST00000305866 HSP90AA1P07900 732 aaKnown RBP6.7□□□□□ -1.34
VPS50-202ENST00000305866 PDE1AP54750 535 aa6.7□□□□□ -1.34
VPS50-202ENST00000305866 POLA2Q14181 598 aa6.7□□□□□ -1.34
VPS50-202ENST00000305866 NUTM2DQ5VT03 806 aaPredicted RBP6.7□□□□□ -1.34
VPS50-202ENST00000305866 RBM43Q6ZSC3 357 aaKnown RBP6.7□□□□□ -1.34
VPS50-202ENST00000305866 TMX3Q96JJ7 454 aa6.7□□□□□ -1.34
VPS50-202ENST00000305866 CANXP27824 592 aaKnown RBP6.7□□□□□ -1.34
VPS50-202ENST00000305866 MYO5AQ9Y4I1 1855 aaKnown RBP6.7□□□□□ -1.34
VPS50-202ENST00000305866 A0A1B0GUL6 1792 aa6.7□□□□□ -1.34
VPS50-202ENST00000305866 MAP3K19Q56UN5 1328 aa6.69□□□□□ -1.34
VPS50-202ENST00000305866 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS50-202ENST00000305866 ABCA3Q99758 1704 aa6.69□□□□□ -1.34
VPS50-202ENST00000305866 UTYO14607 1347 aa6.69□□□□□ -1.34
VPS50-202ENST00000305866 XPCQ01831 940 aaPredicted RBP6.69□□□□□ -1.34
VPS50-202ENST00000305866 FKBP5Q13451 457 aaPredicted RBP6.69□□□□□ -1.34
VPS50-202ENST00000305866 DCTN1Q14203 1278 aa6.69□□□□□ -1.34
VPS50-202ENST00000305866 MYRIPQ8NFW9 859 aa6.69□□□□□ -1.34
VPS50-202ENST00000305866 ESYT1Q9BSJ8 1104 aa6.69□□□□□ -1.34
VPS50-202ENST00000305866 NEDD4P46934 1319 aa6.69□□□□□ -1.34
VPS50-202ENST00000305866 U2SURPO15042 1029 aaKnown RBP6.69□□□□□ -1.34
VPS50-202ENST00000305866 CHMLP26374 656 aa6.69□□□□□ -1.34
VPS50-202ENST00000305866 UTP14CQ5TAP6 766 aaKnown RBP6.69□□□□□ -1.34
VPS50-202ENST00000305866 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.69□□□□□ -1.34
VPS50-202ENST00000305866 PNMA6EA0A0J9YXQ4 647 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 DYNC1I1O14576 645 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 HSPA4P34932 840 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 CCT4P50991 539 aaKnown RBP6.68□□□□□ -1.34
VPS50-202ENST00000305866 NUCB2P80303 420 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 MCTP1Q6DN14 999 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 CAVIN1Q6NZI2 390 aaKnown RBP6.68□□□□□ -1.34
VPS50-202ENST00000305866 SMAP1Q8IYB5 467 aaPredicted RBP6.68□□□□□ -1.34
VPS50-202ENST00000305866 FOXD4L1Q9NU39 408 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 MAP3K5Q99683 1374 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 XIRP1Q702N8 1843 aaKnown RBP6.68□□□□□ -1.34
VPS50-202ENST00000305866 ARAP2Q8WZ64 1704 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 STRCP1A6NGW2 1772 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 ANAPC15P60006 121 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 MTX1Q13505 466 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 ATP2B3Q16720 1220 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 CYB5RLQ6IPT4 315 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 TXNDC2Q86VQ3 553 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 NAP1L5Q96NT1 182 aaPredicted RBP6.68□□□□□ -1.34
VPS50-202ENST00000305866 LSG1Q9H089 658 aaKnown RBP6.68□□□□□ -1.34
VPS50-202ENST00000305866 DOCK2Q92608 1830 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 HMOX1P09601 288 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 TICAM2Q86XR7 235 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 PIBF1Q8WXW3 757 aa6.68□□□□□ -1.34
VPS50-202ENST00000305866 AKAP11Q9UKA4 1901 aa6.67□□□□□ -1.34
VPS50-202ENST00000305866 DMTNQ08495 405 aa6.67□□□□□ -1.34
VPS50-202ENST00000305866 LARGE1O95461 756 aa6.67□□□□□ -1.34
VPS50-202ENST00000305866 SYCE3A1L190 88 aa6.67□□□□□ -1.34
VPS50-202ENST00000305866 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.67□□□□□ -1.34
VPS50-202ENST00000305866 HMGN5P82970 282 aaKnown RBP6.66□□□□□ -1.34
VPS50-202ENST00000305866 RUFY3Q7L099 469 aa6.66□□□□□ -1.34
VPS50-202ENST00000305866 VSIG10Q8N0Z9 540 aa6.66□□□□□ -1.34
VPS50-202ENST00000305866 CHD4Q14839 1912 aa6.66□□□□□ -1.34
VPS50-202ENST00000305866 PXDNQ92626 1479 aa6.66□□□□□ -1.34
VPS50-202ENST00000305866 PRPF40AO75400 957 aaKnown RBP6.66□□□□□ -1.34
VPS50-202ENST00000305866 DDX49Q9Y6V7 483 aaKnown RBP6.66□□□□□ -1.34
VPS50-202ENST00000305866 DLEC1Q9Y238 1755 aa6.66□□□□□ -1.34
VPS50-202ENST00000305866 PLCH1Q4KWH8 1693 aa6.66□□□□□ -1.34
VPS50-202ENST00000305866 HOXC9P31274 260 aa6.65□□□□□ -1.34
VPS50-202ENST00000305866 MTHFSDQ2M296 383 aaKnown RBP6.65□□□□□ -1.34
VPS50-202ENST00000305866 SASS6Q6UVJ0 657 aa6.65□□□□□ -1.34
VPS50-202ENST00000305866 RASEFQ8IZ41 740 aa6.65□□□□□ -1.34
VPS50-202ENST00000305866 KIAA1524Q8TCG1 905 aa6.65□□□□□ -1.34
VPS50-202ENST00000305866 SSH3Q8TE77 659 aa6.65□□□□□ -1.34
VPS50-202ENST00000305866 SRCIN1Q9C0H9 1055 aa6.65□□□□□ -1.34
VPS50-202ENST00000305866 BCORQ6W2J9 1755 aa6.65□□□□□ -1.34
VPS50-202ENST00000305866 SETD1BQ9UPS6 1966 aaKnown RBP6.65□□□□□ -1.35
VPS50-202ENST00000305866 RREB1Q92766 1687 aa6.65□□□□□ -1.35
VPS50-202ENST00000305866 ERC2O15083 957 aa6.65□□□□□ -1.35
VPS50-202ENST00000305866 ATP8B2P98198 1209 aa6.65□□□□□ -1.35
VPS50-202ENST00000305866 USP48Q86UV5 1035 aa6.65□□□□□ -1.35
VPS50-202ENST00000305866 EYA1Q99502 592 aa6.65□□□□□ -1.35
VPS50-202ENST00000305866 USP44Q9H0E7 712 aa6.65□□□□□ -1.35
VPS50-202ENST00000305866 KCND1Q9NSA2 647 aa6.65□□□□□ -1.35
VPS50-202ENST00000305866 UQCRHLA0A096LP55 91 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 UQCRHP07919 91 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 RRS1Q15050 365 aaKnown RBP6.64□□□□□ -1.35
VPS50-202ENST00000305866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS50-202ENST00000305866 THEMISQ8N1K5 641 aaPredicted RBP6.64□□□□□ -1.35
VPS50-202ENST00000305866 AMOTL2Q9Y2J4 779 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 RAD50Q92878 1312 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 SAFB2Q14151 953 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS50-202ENST00000305866 UVSSAQ2YD98 709 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 CCDC94Q9BW85 323 aaPredicted RBP6.64□□□□□ -1.35
VPS50-202ENST00000305866 ALDH8A1Q9H2A2 487 aaPredicted RBP6.64□□□□□ -1.35
VPS50-202ENST00000305866 RFX7Q2KHR2 1363 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 LRP6O75581 1613 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 WNK3Q9BYP7 1800 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 FOXO3O43524 673 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 HSP90AB2PQ58FF8 381 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 TSHZ3Q63HK5 1081 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 SULT6B1Q6IMI4 303 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 IP6K1Q92551 441 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 TSC1Q92574 1164 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 HYPKQ9NX55 129 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms