RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 PIBF1Q8WXW3 757 aa23.13■■□□□ 1.29
TRA2A-201ENST00000297071 RAD50Q92878 1312 aa23.13■■□□□ 1.29
TRA2A-201ENST00000297071 PDIA4P13667 645 aaKnown RBP23.12■■□□□ 1.29
TRA2A-201ENST00000297071 GTF2F1P35269 517 aaKnown RBP eCLIP23.12■■□□□ 1.297e-10■□□□□ 10.7
TRA2A-201ENST00000297071 ATP6V1DQ9Y5K8 247 aa23.12■■□□□ 1.29
TRA2A-201ENST00000297071 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.12■■□□□ 1.297e-9■■■■■ 29.7
TRA2A-201ENST00000297071 NCKAP5LQ9HCH0 1330 aa23.12■■□□□ 1.29
TRA2A-201ENST00000297071 PTMAP06454 111 aaKnown RBP23.12■■□□□ 1.29
TRA2A-201ENST00000297071 TRIM6-TRIM34B2RNG4 842 aa23.11■■□□□ 1.29
TRA2A-201ENST00000297071 UBE2HP62256 183 aa23.11■■□□□ 1.29
TRA2A-201ENST00000297071 TTC14Q96N46 770 aa23.11■■□□□ 1.29
TRA2A-201ENST00000297071 DIP2AQ14689 1571 aa23.11■■□□□ 1.29
TRA2A-201ENST00000297071 USP42Q9H9J4 1324 aaKnown RBP23.11■■□□□ 1.29
TRA2A-201ENST00000297071 PNMA6EA0A0J9YXQ4 647 aa23.1■■□□□ 1.29
TRA2A-201ENST00000297071 TPM3P06753 285 aa23.1■■□□□ 1.29
TRA2A-201ENST00000297071 RILPL2Q969X0 211 aa23.1■■□□□ 1.29
TRA2A-201ENST00000297071 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.1■■□□□ 1.29
TRA2A-201ENST00000297071 ADAMTS13Q76LX8 1427 aa23.1■■□□□ 1.29
TRA2A-201ENST00000297071 ROBO2Q9HCK4 1378 aa23.1■■□□□ 1.29
TRA2A-201ENST00000297071 ZSCAN22P10073 491 aaPredicted RBP23.1■■□□□ 1.29
TRA2A-201ENST00000297071 POLA2Q14181 598 aa23.1■■□□□ 1.29
TRA2A-201ENST00000297071 SPTLC3Q9NUV7 552 aa23.1■■□□□ 1.29
TRA2A-201ENST00000297071 MAP3K5Q99683 1374 aa23.09■■□□□ 1.29
TRA2A-201ENST00000297071 CEP170BQ9Y4F5 1589 aaPredicted RBP23.09■■□□□ 1.29
TRA2A-201ENST00000297071 SGSM2O43147 1006 aa23.09■■□□□ 1.29
TRA2A-201ENST00000297071 RNF214Q8ND24 703 aa23.09■■□□□ 1.29
TRA2A-201ENST00000297071 CHAMP1Q96JM3 812 aa23.09■■□□□ 1.29
TRA2A-201ENST00000297071 FAM13BQ9NYF5 915 aa23.09■■□□□ 1.29
TRA2A-201ENST00000297071 SMAP1Q8IYB5 467 aaPredicted RBP23.08■■□□□ 1.29
TRA2A-201ENST00000297071 CHMP4AQ9BY43 222 aa23.08■■□□□ 1.29
TRA2A-201ENST00000297071 GADD45BO75293 160 aaPredicted RBP23.08■■□□□ 1.28
TRA2A-201ENST00000297071 RBM10P98175 930 aaKnown RBP23.08■■□□□ 1.28
TRA2A-201ENST00000297071 PIK3C2AO00443 1686 aa23.07■■□□□ 1.28
TRA2A-201ENST00000297071 TMEM2Q9UHN6 1383 aa23.07■■□□□ 1.28
TRA2A-201ENST00000297071 FKBP5Q13451 457 aaPredicted RBP23.07■■□□□ 1.28
TRA2A-201ENST00000297071 LIMCH1Q9UPQ0 1083 aa23.07■■□□□ 1.28
TRA2A-201ENST00000297071 MARF1Q9Y4F3 1742 aaKnown RBP23.07■■□□□ 1.28
TRA2A-201ENST00000297071 FOXD4L5Q5VV16 416 aaPredicted RBP23.06■■□□□ 1.28
TRA2A-201ENST00000297071 FOXD4L4Q8WXT5 416 aaPredicted RBP23.06■■□□□ 1.28
TRA2A-201ENST00000297071 KDM3BQ7LBC6 1761 aa23.06■■□□□ 1.28
TRA2A-201ENST00000297071 NWD1Q149M9 1564 aa23.06■■□□□ 1.28
TRA2A-201ENST00000297071 FUCA2Q9BTY2 467 aa23.05■■□□□ 1.28
TRA2A-201ENST00000297071 USP44Q9H0E7 712 aa23.05■■□□□ 1.28
TRA2A-201ENST00000297071 LRRFIP2Q9Y608 721 aaKnown RBP23.05■■□□□ 1.28
TRA2A-201ENST00000297071 PLEKHG1Q9ULL1 1385 aa23.05■■□□□ 1.28
TRA2A-201ENST00000297071 HSP90AB4PQ58FF6 505 aa23.05■■□□□ 1.28
TRA2A-201ENST00000297071 PI4K2BQ8TCG2 481 aa23.05■■□□□ 1.28
TRA2A-201ENST00000297071 KCNB2Q92953 911 aa23.05■■□□□ 1.28
TRA2A-201ENST00000297071 TM6SF1Q9BZW5 370 aa23.05■■□□□ 1.28
TRA2A-201ENST00000297071 LSG1Q9H089 658 aaKnown RBP23.05■■□□□ 1.28
TRA2A-201ENST00000297071 SNX14Q9Y5W7 946 aa23.05■■□□□ 1.28
TRA2A-201ENST00000297071 STX6O43752 255 aa23.04■■□□□ 1.28
TRA2A-201ENST00000297071 UBTFL1P0CB47 393 aaPredicted RBP23.04■■□□□ 1.28
TRA2A-201ENST00000297071 MED1Q15648 1581 aaPredicted RBP23.04■■□□□ 1.28
TRA2A-201ENST00000297071 UNC5CLQ8IV45 518 aa23.04■■□□□ 1.28
TRA2A-201ENST00000297071 KIF1BPQ96EK5 621 aa23.04■■□□□ 1.28
TRA2A-201ENST00000297071 ZSCAN31Q96LW9 406 aaPredicted RBP23.04■■□□□ 1.28
TRA2A-201ENST00000297071 GNAT3A8MTJ3 354 aa23.03■■□□□ 1.28
TRA2A-201ENST00000297071 F13A1P00488 732 aa23.03■■□□□ 1.28
TRA2A-201ENST00000297071 NOLC1Q14978 699 aaKnown RBP eCLIP23.03■■□□□ 1.28
TRA2A-201ENST00000297071 CNTROBQ8N137 903 aa23.03■■□□□ 1.28
TRA2A-201ENST00000297071 UPF3BQ9BZI7 483 aaKnown RBP23.03■■□□□ 1.28
TRA2A-201ENST00000297071 MIS18AQ9NYP9 233 aa23.03■■□□□ 1.28
TRA2A-201ENST00000297071 TTC41PQ6P2S7 1318 aa23.03■■□□□ 1.28
TRA2A-201ENST00000297071 KDM4AO75164 1064 aa23.03■■□□□ 1.28
TRA2A-201ENST00000297071 TSHZ3Q63HK5 1081 aa23.03■■□□□ 1.28
TRA2A-201ENST00000297071 FOXO3O43524 673 aa23.02■■□□□ 1.28
TRA2A-201ENST00000297071 SH2B1Q9NRF2 756 aaPredicted RBP23.02■■□□□ 1.28
TRA2A-201ENST00000297071 HOXB7P09629 217 aa23.01■■□□□ 1.27
TRA2A-201ENST00000297071 EYA1Q99502 592 aa23.01■■□□□ 1.27
TRA2A-201ENST00000297071 USP25Q9UHP3 1055 aa23.01■■□□□ 1.27
TRA2A-201ENST00000297071 TNRQ92752 1358 aa23.01■■□□□ 1.27
TRA2A-201ENST00000297071 ADCY5O95622 1261 aa23.01■■□□□ 1.27
TRA2A-201ENST00000297071 RHPN1Q8TCX5 695 aa23.01■■□□□ 1.27
TRA2A-201ENST00000297071 CCDC94Q9BW85 323 aaPredicted RBP23.01■■□□□ 1.27
TRA2A-201ENST00000297071 RGPD8O14715 1765 aaPredicted RBP23■■□□□ 1.27
TRA2A-201ENST00000297071 SYT1P21579 422 aa23■■□□□ 1.27
TRA2A-201ENST00000297071 RUFY2Q8WXA3 655 aa23■■□□□ 1.27
TRA2A-201ENST00000297071 SMC3Q9UQE7 1217 aa23■■□□□ 1.27
TRA2A-201ENST00000297071 TAF7Q15545 349 aaPredicted RBP22.99■■□□□ 1.27
TRA2A-201ENST00000297071 CCDC171Q6TFL3 1326 aa22.99■■□□□ 1.27
TRA2A-201ENST00000297071 AK2P54819 239 aa22.98■■□□□ 1.27
TRA2A-201ENST00000297071 VPS53Q5VIR6 699 aa22.98■■□□□ 1.27
TRA2A-201ENST00000297071 CNPY2Q9Y2B0 182 aa22.98■■□□□ 1.27
TRA2A-201ENST00000297071 RUFY3Q7L099 469 aa22.98■■□□□ 1.27
TRA2A-201ENST00000297071 IL25Q9H293 177 aa22.98■■□□□ 1.27
TRA2A-201ENST00000297071 PLPPR3Q6T4P5 718 aa22.97■■□□□ 1.27
TRA2A-201ENST00000297071 GDPD2Q9HCC8 539 aa22.97■■□□□ 1.27
TRA2A-201ENST00000297071 GLRX3O76003 335 aaKnown RBP22.96■■□□□ 1.27
TRA2A-201ENST00000297071 NOL8Q76FK4 1167 aaKnown RBP22.96■■□□□ 1.27
TRA2A-201ENST00000297071 ADGRL3Q9HAR2 1447 aa22.96■■□□□ 1.27
TRA2A-201ENST00000297071 PPP1R42Q7Z4L9 355 aa22.96■■□□□ 1.27
TRA2A-201ENST00000297071 LMO7Q8WWI1 1683 aa22.95■■□□□ 1.26
TRA2A-201ENST00000297071 SURF6O75683 361 aaKnown RBP22.95■■□□□ 1.26
TRA2A-201ENST00000297071 MTX1Q13505 466 aa22.95■■□□□ 1.26
TRA2A-201ENST00000297071 HYPKQ9NX55 129 aa22.95■■□□□ 1.26
TRA2A-201ENST00000297071 PRDM4Q9UKN5 801 aa22.95■■□□□ 1.26
TRA2A-201ENST00000297071 ELP1O95163 1332 aa22.94■■□□□ 1.26
TRA2A-201ENST00000297071 GOLGA6L6A8MZA4 724 aa22.94■■□□□ 1.26
TRA2A-201ENST00000297071 HCLS1P14317 486 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms