RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 ESYT1Q9BSJ8 1104 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 CHMP4AQ9BY43 222 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 IL1RAPL2Q9NP60 686 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 ADCY9O60503 1353 aa11.39□□□□□ -0.59
UBLCP1-201ENST00000296786 BEND3Q5T5X7 828 aa11.39□□□□□ -0.59
UBLCP1-201ENST00000296786 AXIN2Q9Y2T1 843 aa11.39□□□□□ -0.59
UBLCP1-201ENST00000296786 C5P01031 1676 aa11.39□□□□□ -0.59
UBLCP1-201ENST00000296786 POLA2Q14181 598 aa11.39□□□□□ -0.59
UBLCP1-201ENST00000296786 SRGAP3O43295 1099 aa11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 SURF6O75683 361 aaKnown RBP11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 XRCC6P12956 609 aaKnown RBP eCLIP11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 CHMLP26374 656 aa11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 KRT28Q7Z3Y7 464 aa11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 UNC5CLQ8IV45 518 aa11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 AOX1Q06278 1338 aa11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 C1orf167Q5SNV9 1468 aa11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 RAB11FIP3O75154 756 aa11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 PTMSP20962 102 aa11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 CLEC17AQ6ZS10 378 aa11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 PROSER2Q86WR7 435 aaPredicted RBP11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 NUTM1Q86Y26 1132 aa11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 DBF4Q9UBU7 674 aaPredicted RBP11.38□□□□□ -0.59
UBLCP1-201ENST00000296786 STRCP1A6NGW2 1772 aa11.37□□□□□ -0.59
UBLCP1-201ENST00000296786 GIGYF1O75420 1035 aaPredicted RBP11.36□□□□□ -0.59
UBLCP1-201ENST00000296786 SKOR2Q2VWA4 1001 aaPredicted RBP11.36□□□□□ -0.59
UBLCP1-201ENST00000296786 RHPN1Q8TCX5 695 aa11.36□□□□□ -0.59
UBLCP1-201ENST00000296786 ANO2Q9NQ90 1003 aa11.36□□□□□ -0.59
UBLCP1-201ENST00000296786 HEG1Q9ULI3 1381 aa11.36□□□□□ -0.59
UBLCP1-201ENST00000296786 ERBB3P21860 1342 aa11.36□□□□□ -0.59
UBLCP1-201ENST00000296786 BAG4O95429 457 aaKnown RBP11.36□□□□□ -0.59
UBLCP1-201ENST00000296786 NUCB2P80303 420 aa11.36□□□□□ -0.59
UBLCP1-201ENST00000296786 PROSER3Q2NL68 480 aa11.36□□□□□ -0.59
UBLCP1-201ENST00000296786 ZGPATQ8N5A5 531 aaKnown RBP11.36□□□□□ -0.59
UBLCP1-201ENST00000296786 COL18A1P39060 1754 aa11.36□□□□□ -0.59
UBLCP1-201ENST00000296786 LMTK3Q96Q04 1460 aa11.36□□□□□ -0.59
UBLCP1-201ENST00000296786 PRAMEF22A3QJZ6 481 aa11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 GOLGA6L22H0YM25 854 aa11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 CYP2E1P05181 493 aaPredicted RBP11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 NEK4P51957 841 aa11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 PKP1Q13835 747 aa11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 KIF1BPQ96EK5 621 aa11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 PALD1Q9ULE6 856 aa11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 MST1RQ04912 1400 aa11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 TCHHQ07283 1943 aa11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 MCCP23508 829 aa11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 ZC3H6P61129 1189 aaKnown RBP11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 PI4K2BQ8TCG2 481 aa11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 PANK2Q9BZ23 570 aa11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 CWC22Q9HCG8 908 aaKnown RBP11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 MAP3K2Q9Y2U5 619 aa11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 AFDNP55196 1824 aaKnown RBP11.35□□□□□ -0.59
UBLCP1-201ENST00000296786 MAP4K4O95819 1239 aaPredicted RBP11.34□□□□□ -0.59
UBLCP1-201ENST00000296786 IL25Q9H293 177 aa11.34□□□□□ -0.59
UBLCP1-201ENST00000296786 C19orf44Q9H6X5 657 aa11.34□□□□□ -0.59
UBLCP1-201ENST00000296786 MRE11P49959 708 aa11.34□□□□□ -0.59
UBLCP1-201ENST00000296786 ANAPC15P60006 121 aa11.33□□□□□ -0.6
UBLCP1-201ENST00000296786 KSR2Q6VAB6 950 aa11.33□□□□□ -0.6
UBLCP1-201ENST00000296786 GRPEL1Q9HAV7 217 aa11.33□□□□□ -0.6
UBLCP1-201ENST00000296786 C9orf78Q9NZ63 289 aaPredicted RBP11.33□□□□□ -0.6
UBLCP1-201ENST00000296786 ALDH1L1O75891 902 aa11.33□□□□□ -0.6
UBLCP1-201ENST00000296786 MTX1Q13505 466 aa11.33□□□□□ -0.6
UBLCP1-201ENST00000296786 CWF19L2Q2TBE0 894 aaKnown RBP11.33□□□□□ -0.6
UBLCP1-201ENST00000296786 HSP90AB4PQ58FF6 505 aa11.33□□□□□ -0.6
UBLCP1-201ENST00000296786 TMX3Q96JJ7 454 aa11.33□□□□□ -0.6
UBLCP1-201ENST00000296786 ISY1Q9ULR0 285 aaKnown RBP11.33□□□□□ -0.6
UBLCP1-201ENST00000296786 MCTP1Q6DN14 999 aa11.32□□□□□ -0.6
UBLCP1-201ENST00000296786 FAM43AQ8N2R8 423 aa11.32□□□□□ -0.6
UBLCP1-201ENST00000296786 HYPKQ9NX55 129 aa11.32□□□□□ -0.6
UBLCP1-201ENST00000296786 KDM6AO15550 1401 aaPredicted RBP11.32□□□□□ -0.6
UBLCP1-201ENST00000296786 MCM2P49736 904 aa11.32□□□□□ -0.6
UBLCP1-201ENST00000296786 OS9Q13438 667 aaPredicted RBP11.32□□□□□ -0.6
UBLCP1-201ENST00000296786 DDX49Q9Y6V7 483 aaKnown RBP11.32□□□□□ -0.6
UBLCP1-201ENST00000296786 PKD1L3Q7Z443 1732 aa11.31□□□□□ -0.6
UBLCP1-201ENST00000296786 KLHL40Q2TBA0 621 aa11.31□□□□□ -0.6
UBLCP1-201ENST00000296786 GAS2L3Q86XJ1 694 aa11.31□□□□□ -0.6
UBLCP1-201ENST00000296786 CNTROBQ8N137 903 aa11.31□□□□□ -0.6
UBLCP1-201ENST00000296786 RAPGEF4Q8WZA2 1011 aa11.31□□□□□ -0.6
UBLCP1-201ENST00000296786 DDX17Q92841 729 aaKnown RBP11.31□□□□□ -0.6
UBLCP1-201ENST00000296786 IL17RAQ96F46 866 aa11.31□□□□□ -0.6
UBLCP1-201ENST00000296786 ZDHHC9Q9Y397 364 aa11.31□□□□□ -0.6
UBLCP1-201ENST00000296786 MEGF6O75095 1541 aa11.31□□□□□ -0.6
UBLCP1-201ENST00000296786 SLC39A6Q13433 755 aa11.31□□□□□ -0.6
UBLCP1-201ENST00000296786 DDX21Q9NR30 783 aaKnown RBP eCLIP11.31□□□□□ -0.6
UBLCP1-201ENST00000296786 NLRP2Q9NX02 1062 aa11.31□□□□□ -0.6
UBLCP1-201ENST00000296786 NPHP3Q7Z494 1330 aa11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 USP42Q9H9J4 1324 aaKnown RBP11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 EPB41L2O43491 1005 aaKnown RBP11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 ATF3P18847 181 aa11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 HSPA4P34932 840 aa11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 AIMP1Q12904 312 aaKnown RBP11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 ZNF790Q6PG37 636 aa11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 UPF3BQ9BZI7 483 aaKnown RBP11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 PA2G4Q9UQ80 394 aaKnown RBP11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 ARFGEF2Q9Y6D5 1785 aa11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 TTC41PQ6P2S7 1318 aa11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 SGSM2O43147 1006 aa11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 DDX58O95786 925 aaKnown RBP11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 PDIA6Q15084 440 aa11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 CLASRPQ8N2M8 674 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms