RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
CNOT9-202ENST00000295701 GRIN3BO60391 1043 aa12.88□□□□□ -0.35
CNOT9-202ENST00000295701 GIGYF1O75420 1035 aaPredicted RBP12.88□□□□□ -0.35
CNOT9-202ENST00000295701 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
CNOT9-202ENST00000295701 TNNT2P45379 298 aaPredicted RBP12.88□□□□□ -0.35
CNOT9-202ENST00000295701 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
CNOT9-202ENST00000295701 SMARCC1Q92922 1105 aaPredicted RBP12.88□□□□□ -0.35
CNOT9-202ENST00000295701 AK7Q96M32 723 aa12.88□□□□□ -0.35
CNOT9-202ENST00000295701 ASAP1Q9ULH1 1129 aa12.88□□□□□ -0.35
CNOT9-202ENST00000295701 WASHC2AQ641Q2 1341 aa12.88□□□□□ -0.35
CNOT9-202ENST00000295701 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.87□□□□□ -0.35
CNOT9-202ENST00000295701 ITPK1Q13572 414 aa12.87□□□□□ -0.35
CNOT9-202ENST00000295701 FLAD1Q8NFF5 587 aa12.87□□□□□ -0.35
CNOT9-202ENST00000295701 CD2APQ9Y5K6 639 aa12.87□□□□□ -0.35
CNOT9-202ENST00000295701 ANKRD26Q9UPS8 1709 aa12.87□□□□□ -0.35
CNOT9-202ENST00000295701 LOC102724428A0A0B4J2F2 783 aa12.86□□□□□ -0.35
CNOT9-202ENST00000295701 SIK1P57059 783 aa12.86□□□□□ -0.35
CNOT9-202ENST00000295701 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
CNOT9-202ENST00000295701 PHKG2P15735 406 aa12.85□□□□□ -0.35
CNOT9-202ENST00000295701 EIF4A2Q14240 407 aaKnown RBP12.85□□□□□ -0.35
CNOT9-202ENST00000295701 ATG3Q9NT62 314 aa12.85□□□□□ -0.35
CNOT9-202ENST00000295701 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
CNOT9-202ENST00000295701 TAOK2Q9UL54 1235 aa12.85□□□□□ -0.35
CNOT9-202ENST00000295701 CEP350Q5VT06 3117 aa12.84□□□□□ -0.35
CNOT9-202ENST00000295701 IGSF1Q8N6C5 1336 aa12.84□□□□□ -0.35
CNOT9-202ENST00000295701 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
CNOT9-202ENST00000295701 G3V3G9 751 aa12.83□□□□□ -0.36
CNOT9-202ENST00000295701 ATP6V1AP38606 617 aa12.83□□□□□ -0.36
CNOT9-202ENST00000295701 IFNL2Q8IZJ0 200 aa12.83□□□□□ -0.36
CNOT9-202ENST00000295701 ZNF526Q8TF50 670 aaPredicted RBP12.83□□□□□ -0.36
CNOT9-202ENST00000295701 SLC4A9Q96Q91 983 aa12.83□□□□□ -0.36
CNOT9-202ENST00000295701 GNPATO15228 680 aa12.82□□□□□ -0.36
CNOT9-202ENST00000295701 SSFA2P28290 1259 aa12.82□□□□□ -0.36
CNOT9-202ENST00000295701 PCGF6Q9BYE7 350 aa12.82□□□□□ -0.36
CNOT9-202ENST00000295701 BOLA1Q9Y3E2 137 aa12.82□□□□□ -0.36
CNOT9-202ENST00000295701 MYH14Q7Z406 1995 aaKnown RBP12.81□□□□□ -0.36
CNOT9-202ENST00000295701 N4BP2Q86UW6 1770 aaPredicted RBP12.8□□□□□ -0.36
CNOT9-202ENST00000295701 SNPHO15079 494 aa12.79□□□□□ -0.36
CNOT9-202ENST00000295701 MMP10P09238 476 aa12.79□□□□□ -0.36
CNOT9-202ENST00000295701 HSPA5P11021 654 aaKnown RBP12.79□□□□□ -0.36
CNOT9-202ENST00000295701 HMGB2P26583 209 aaKnown RBP12.79□□□□□ -0.36
CNOT9-202ENST00000295701 PANK3Q9H999 370 aa12.79□□□□□ -0.36
CNOT9-202ENST00000295701 AEBP1Q8IUX7 1158 aa12.78□□□□□ -0.36
CNOT9-202ENST00000295701 GPBP1L1Q9HC44 474 aaPredicted RBP12.78□□□□□ -0.36
CNOT9-202ENST00000295701 ADCY9O60503 1353 aa12.78□□□□□ -0.36
CNOT9-202ENST00000295701 A0A0G2JLW4 131 aa12.77□□□□□ -0.37
CNOT9-202ENST00000295701 ST18O60284 1047 aa12.77□□□□□ -0.37
CNOT9-202ENST00000295701 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.37
CNOT9-202ENST00000295701 TIMELESSQ9UNS1 1208 aa12.77□□□□□ -0.37
CNOT9-202ENST00000295701 KDRP35968 1356 aa12.77□□□□□ -0.37
CNOT9-202ENST00000295701 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
CNOT9-202ENST00000295701 KIF13BQ9NQT8 1826 aa12.76□□□□□ -0.37
CNOT9-202ENST00000295701 ERVV-2B6SEH9 535 aa12.76□□□□□ -0.37
CNOT9-202ENST00000295701 RGL2O15211 777 aa12.76□□□□□ -0.37
CNOT9-202ENST00000295701 PLEKHO1Q53GL0 409 aaPredicted RBP12.76□□□□□ -0.37
CNOT9-202ENST00000295701 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
CNOT9-202ENST00000295701 ZNF530Q6P9A1 599 aaPredicted RBP12.76□□□□□ -0.37
CNOT9-202ENST00000295701 RTCBQ9Y3I0 505 aaKnown RBP12.76□□□□□ -0.37
CNOT9-202ENST00000295701 KDM6AO15550 1401 aaPredicted RBP12.76□□□□□ -0.37
CNOT9-202ENST00000295701 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
CNOT9-202ENST00000295701 DCAF5Q96JK2 942 aa12.75□□□□□ -0.37
CNOT9-202ENST00000295701 CICQ96RK0 1608 aaPredicted RBP12.75□□□□□ -0.37
CNOT9-202ENST00000295701 STK24Q9Y6E0 443 aa12.75□□□□□ -0.37
CNOT9-202ENST00000295701 PXDNLA1KZ92 1463 aa12.74□□□□□ -0.37
CNOT9-202ENST00000295701 STK25O00506 426 aa12.74□□□□□ -0.37
CNOT9-202ENST00000295701 PTCD1O75127 700 aaKnown RBP12.74□□□□□ -0.37
CNOT9-202ENST00000295701 GYS1P13807 737 aa12.74□□□□□ -0.37
CNOT9-202ENST00000295701 CABP4P57796 275 aa12.74□□□□□ -0.37
CNOT9-202ENST00000295701 EIF4G2P78344 907 aaKnown RBP eCLIP12.74□□□□□ -0.37
CNOT9-202ENST00000295701 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
CNOT9-202ENST00000295701 KIF3CO14782 793 aa12.73□□□□□ -0.37
CNOT9-202ENST00000295701 RPS6KA4O75676 772 aa12.73□□□□□ -0.37
CNOT9-202ENST00000295701 HSP90AB1P08238 724 aaKnown RBP12.73□□□□□ -0.37
CNOT9-202ENST00000295701 DPEP1P16444 411 aa12.73□□□□□ -0.37
CNOT9-202ENST00000295701 MTHFSP49914 203 aa12.73□□□□□ -0.37
CNOT9-202ENST00000295701 MORC1Q86VD1 984 aa12.73□□□□□ -0.37
CNOT9-202ENST00000295701 NFATC2IPQ8NCF5 419 aa12.73□□□□□ -0.37
CNOT9-202ENST00000295701 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
CNOT9-202ENST00000295701 SRP68Q9UHB9 627 aaKnown RBP12.73□□□□□ -0.37
CNOT9-202ENST00000295701 BCS1LQ9Y276 419 aa12.73□□□□□ -0.37
CNOT9-202ENST00000295701 ZNF831Q5JPB2 1677 aa12.73□□□□□ -0.37
CNOT9-202ENST00000295701 CNTNAP4Q9C0A0 1308 aa12.72□□□□□ -0.37
CNOT9-202ENST00000295701 C4AP0C0L4 1744 aa12.72□□□□□ -0.37
CNOT9-202ENST00000295701 RFC4P35249 363 aa12.72□□□□□ -0.37
CNOT9-202ENST00000295701 SULT6B1Q6IMI4 303 aa12.72□□□□□ -0.37
CNOT9-202ENST00000295701 NLGN1Q8N2Q7 840 aa12.72□□□□□ -0.37
CNOT9-202ENST00000295701 PCDH10Q9P2E7 1040 aa12.72□□□□□ -0.37
CNOT9-202ENST00000295701 BRCA1P38398 1863 aaKnown RBP12.72□□□□□ -0.37
CNOT9-202ENST00000295701 HSPA6P17066 643 aa12.71□□□□□ -0.37
CNOT9-202ENST00000295701 KCNA3P22001 575 aa12.71□□□□□ -0.37
CNOT9-202ENST00000295701 TGFB2P61812 414 aa12.71□□□□□ -0.37
CNOT9-202ENST00000295701 AMOTQ4VCS5 1084 aa12.71□□□□□ -0.37
CNOT9-202ENST00000295701 ARHGAP27Q6ZUM4 889 aa12.71□□□□□ -0.37
CNOT9-202ENST00000295701 MS4A4AQ96JQ5 239 aa12.71□□□□□ -0.37
CNOT9-202ENST00000295701 C10orf71Q711Q0 1435 aa12.71□□□□□ -0.38
CNOT9-202ENST00000295701 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
CNOT9-202ENST00000295701 VIRMAQ69YN4 1812 aaKnown RBP12.7□□□□□ -0.38
CNOT9-202ENST00000295701 FCHSD2O94868 740 aa12.7□□□□□ -0.38
CNOT9-202ENST00000295701 IL13P35225 146 aa12.7□□□□□ -0.38
CNOT9-202ENST00000295701 CRKLP46109 303 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms