RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 NUP188Q5SRE5 1749 aa29.24■■■□□ 2.27
LINC01116-201ENST00000295549 ANO8Q9HCE9 1232 aaPredicted RBP29.23■■■□□ 2.27
LINC01116-201ENST00000295549 TAF1LQ8IZX4 1826 aa29.22■■■□□ 2.27
LINC01116-201ENST00000295549 EXOSC9Q06265 439 aaKnown RBP29.22■■■□□ 2.27
LINC01116-201ENST00000295549 INTS5Q6P9B9 1019 aaKnown RBP29.22■■■□□ 2.27
LINC01116-201ENST00000295549 CCDC87Q9NVE4 849 aa29.22■■■□□ 2.27
LINC01116-201ENST00000295549 SLC15A2Q16348 729 aa29.21■■■□□ 2.27
LINC01116-201ENST00000295549 ZNF827Q17R98 1081 aa29.21■■■□□ 2.27
LINC01116-201ENST00000295549 TSPYL6Q8N831 410 aa29.21■■■□□ 2.27
LINC01116-201ENST00000295549 STK32BQ9NY57 414 aa29.21■■■□□ 2.27
LINC01116-201ENST00000295549 ELL2O00472 640 aaPredicted RBP29.2■■■□□ 2.27
LINC01116-201ENST00000295549 C4BP0C0L5 1744 aa29.2■■■□□ 2.27
LINC01116-201ENST00000295549 COL5A3P25940 1745 aaPredicted RBP29.2■■■□□ 2.27
LINC01116-201ENST00000295549 AK7Q96M32 723 aa29.2■■■□□ 2.27
LINC01116-201ENST00000295549 YTHDC1Q96MU7 727 aaKnown RBP29.2■■■□□ 2.27
LINC01116-201ENST00000295549 TWISTNBQ3B726 338 aaPredicted RBP29.2■■■□□ 2.26
LINC01116-201ENST00000295549 CHMP4AQ9BY43 222 aa29.2■■■□□ 2.26
LINC01116-201ENST00000295549 A1BGP04217 495 aa29.18■■■□□ 2.26
LINC01116-201ENST00000295549 EIF2S2P20042 333 aaKnown RBP29.18■■■□□ 2.26
LINC01116-201ENST00000295549 TFCP2L1Q9NZI6 479 aa29.18■■■□□ 2.26
LINC01116-201ENST00000295549 ZBTB1Q9Y2K1 713 aa29.18■■■□□ 2.26
LINC01116-201ENST00000295549 GNPATO15228 680 aa29.17■■■□□ 2.26
LINC01116-201ENST00000295549 RPS6KA4O75676 772 aa29.17■■■□□ 2.26
LINC01116-201ENST00000295549 ERBB4Q15303 1308 aa29.16■■■□□ 2.26
LINC01116-201ENST00000295549 HDGFL1Q5TGJ6 251 aa29.16■■■□□ 2.26
LINC01116-201ENST00000295549 VAMP4O75379 141 aa29.15■■■□□ 2.26
LINC01116-201ENST00000295549 RTCBQ9Y3I0 505 aaKnown RBP29.15■■■□□ 2.26
LINC01116-201ENST00000295549 SSFA2P28290 1259 aa29.14■■■□□ 2.26
LINC01116-201ENST00000295549 MYH14Q7Z406 1995 aaKnown RBP29.13■■■□□ 2.25
LINC01116-201ENST00000295549 LAMB4A4D0S4 1761 aa29.13■■■□□ 2.25
LINC01116-201ENST00000295549 NBPF26B4DH59 902 aa29.13■■■□□ 2.25
LINC01116-201ENST00000295549 CANXP27824 592 aaKnown RBP29.13■■■□□ 2.25
LINC01116-201ENST00000295549 NBPF10Q6P3W6 841 aaKnown RBP29.13■■■□□ 2.25
LINC01116-201ENST00000295549 NBPF15Q8N660 670 aa29.13■■■□□ 2.25
LINC01116-201ENST00000295549 IL6STP40189 918 aaPredicted RBP29.12■■■□□ 2.25
LINC01116-201ENST00000295549 AMIGO3Q86WK7 504 aa29.12■■■□□ 2.25
LINC01116-201ENST00000295549 FLAD1Q8NFF5 587 aa29.12■■■□□ 2.25
LINC01116-201ENST00000295549 CT47B1P0C2W7 299 aaPredicted RBP29.11■■■□□ 2.25
LINC01116-201ENST00000295549 ADRA2BP18089 450 aa29.11■■■□□ 2.25
LINC01116-201ENST00000295549 EIF5P55010 431 aaKnown RBP29.11■■■□□ 2.25
LINC01116-201ENST00000295549 PDIA6Q15084 440 aa29.11■■■□□ 2.25
LINC01116-201ENST00000295549 CCDC30Q5VVM6 783 aa29.11■■■□□ 2.25
LINC01116-201ENST00000295549 NECTIN2Q92692 538 aa29.11■■■□□ 2.25
LINC01116-201ENST00000295549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.1■■■□□ 2.25
LINC01116-201ENST00000295549 DDX21Q9NR30 783 aaKnown RBP eCLIP29.1■■■□□ 2.25
LINC01116-201ENST00000295549 DBF4Q9UBU7 674 aaPredicted RBP29.1■■■□□ 2.25
LINC01116-201ENST00000295549 PNPLA7Q6ZV29 1317 aa29.09■■■□□ 2.25
LINC01116-201ENST00000295549 PIP4K2AP48426 406 aaPredicted RBP29.09■■■□□ 2.25
LINC01116-201ENST00000295549 TRAPPC3LQ5T215 181 aa29.09■■■□□ 2.25
LINC01116-201ENST00000295549 R3HDM1Q15032 1099 aaKnown RBP29.08■■■□□ 2.25
LINC01116-201ENST00000295549 ZNF428Q96B54 188 aa29.08■■■□□ 2.25
LINC01116-201ENST00000295549 CHPF2Q9P2E5 772 aa29.08■■■□□ 2.25
LINC01116-201ENST00000295549 LRP10Q7Z4F1 713 aa29.07■■■□□ 2.24
LINC01116-201ENST00000295549 UBR3Q6ZT12 1888 aa29.06■■■□□ 2.24
LINC01116-201ENST00000295549 PHF14O94880 888 aa29.06■■■□□ 2.24
LINC01116-201ENST00000295549 SMIM5Q71RC9 77 aa29.06■■■□□ 2.24
LINC01116-201ENST00000295549 ARHGEF1Q92888 912 aaKnown RBP29.06■■■□□ 2.24
LINC01116-201ENST00000295549 COL15A1P39059 1388 aa29.05■■■□□ 2.24
LINC01116-201ENST00000295549 A0A087WZG4 1122 aa29.05■■■□□ 2.24
LINC01116-201ENST00000295549 MYL6BP14649 208 aa29.05■■■□□ 2.24
LINC01116-201ENST00000295549 PROSER3Q2NL68 480 aa29.05■■■□□ 2.24
LINC01116-201ENST00000295549 NPM2Q86SE8 214 aaKnown RBP29.05■■■□□ 2.24
LINC01116-201ENST00000295549 COL23A1Q86Y22 540 aaPredicted RBP29.05■■■□□ 2.24
LINC01116-201ENST00000295549 STK31Q9BXU1 1019 aa29.04■■■□□ 2.24
LINC01116-201ENST00000295549 HYPKQ9NX55 129 aa29.04■■■□□ 2.24
LINC01116-201ENST00000295549 ZNF330Q9Y3S2 320 aaPredicted RBP29.03■■■□□ 2.24
LINC01116-201ENST00000295549 ANXA1P04083 346 aa29.03■■■□□ 2.24
LINC01116-201ENST00000295549 RFC4P35249 363 aa29.02■■■□□ 2.24
LINC01116-201ENST00000295549 QSER1Q2KHR3 1735 aa29.01■■■□□ 2.23
LINC01116-201ENST00000295549 PSDA5PKW4 1024 aaPredicted RBP29.01■■■□□ 2.23
LINC01116-201ENST00000295549 SLC4A2P04920 1241 aa29■■■□□ 2.23
LINC01116-201ENST00000295549 TUBGCP6Q96RT7 1819 aa29■■■□□ 2.23
LINC01116-201ENST00000295549 TCERG1O14776 1098 aaKnown RBP28.99■■■□□ 2.23
LINC01116-201ENST00000295549 ALDH1L2Q3SY69 923 aa28.99■■■□□ 2.23
LINC01116-201ENST00000295549 PDGFDQ9GZP0 370 aaPredicted RBP28.99■■■□□ 2.23
LINC01116-201ENST00000295549 NARFQ9UHQ1 456 aa28.99■■■□□ 2.23
LINC01116-201ENST00000295549 MSH5O43196 834 aa28.98■■■□□ 2.23
LINC01116-201ENST00000295549 DZIP3Q86Y13 1208 aaKnown RBP28.98■■■□□ 2.23
LINC01116-201ENST00000295549 SLC16A10Q8TF71 515 aa28.98■■■□□ 2.23
LINC01116-201ENST00000295549 USP42Q9H9J4 1324 aaKnown RBP28.97■■■□□ 2.23
LINC01116-201ENST00000295549 ZPR1O75312 459 aa28.97■■■□□ 2.23
LINC01116-201ENST00000295549 COPS6Q7L5N1 327 aa28.97■■■□□ 2.23
LINC01116-201ENST00000295549 TBC1D2BQ9UPU7 963 aa28.97■■■□□ 2.23
LINC01116-201ENST00000295549 XAGE3Q8WTP9 111 aa28.96■■■□□ 2.23
LINC01116-201ENST00000295549 SSH1Q8WYL5 1049 aa28.96■■■□□ 2.23
LINC01116-201ENST00000295549 TTLL7Q6ZT98 887 aa28.95■■■□□ 2.23
LINC01116-201ENST00000295549 ARXQ96QS3 562 aa28.95■■■□□ 2.23
LINC01116-201ENST00000295549 PHAXQ9H814 394 aaKnown RBP28.95■■■□□ 2.23
LINC01116-201ENST00000295549 RGL2O15211 777 aa28.94■■■□□ 2.22
LINC01116-201ENST00000295549 CAMTA2O94983 1202 aa28.94■■■□□ 2.22
LINC01116-201ENST00000295549 RARSP54136 660 aaKnown RBP28.94■■■□□ 2.22
LINC01116-201ENST00000295549 SRP68Q9UHB9 627 aaKnown RBP28.94■■■□□ 2.22
LINC01116-201ENST00000295549 ERVV-1B6SEH8 477 aa28.94■■■□□ 2.22
LINC01116-201ENST00000295549 KIF6Q6ZMV9 814 aa28.94■■■□□ 2.22
LINC01116-201ENST00000295549 GYS1P13807 737 aa28.93■■■□□ 2.22
LINC01116-201ENST00000295549 AIMP1Q12904 312 aaKnown RBP28.93■■■□□ 2.22
LINC01116-201ENST00000295549 USPL1Q5W0Q7 1092 aa28.93■■■□□ 2.22
LINC01116-201ENST00000295549 MRPL50Q8N5N7 158 aaKnown RBP28.93■■■□□ 2.22
LINC01116-201ENST00000295549 MAP3K15Q6ZN16 1313 aa28.92■■■□□ 2.22
LINC01116-201ENST00000295549 BRPF1P55201 1214 aaPredicted RBP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms