RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 PALD1Q9ULE6 856 aa19.32■□□□□ 0.68
NCKIPSD-201ENST00000294129 XRCC6P12956 609 aaKnown RBP eCLIP19.32■□□□□ 0.68
NCKIPSD-201ENST00000294129 PRKCSHP14314 528 aaPredicted RBP19.32■□□□□ 0.68
NCKIPSD-201ENST00000294129 AMOTQ4VCS5 1084 aa19.32■□□□□ 0.68
NCKIPSD-201ENST00000294129 SSH3Q8TE77 659 aa19.32■□□□□ 0.68
NCKIPSD-201ENST00000294129 C9orf78Q9NZ63 289 aaPredicted RBP19.32■□□□□ 0.68
NCKIPSD-201ENST00000294129 CHMLP26374 656 aa19.32■□□□□ 0.68
NCKIPSD-201ENST00000294129 RHPN1Q8TCX5 695 aa19.31■□□□□ 0.68
NCKIPSD-201ENST00000294129 CHAMP1Q96JM3 812 aa19.3■□□□□ 0.68
NCKIPSD-201ENST00000294129 UPF3BQ9BZI7 483 aaKnown RBP19.3■□□□□ 0.68
NCKIPSD-201ENST00000294129 IL25Q9H293 177 aa19.3■□□□□ 0.68
NCKIPSD-201ENST00000294129 DBF4Q9UBU7 674 aaPredicted RBP19.3■□□□□ 0.68
NCKIPSD-201ENST00000294129 CSB-PGBD3P0DP91 1061 aa19.3■□□□□ 0.68
NCKIPSD-201ENST00000294129 MCTP1Q6DN14 999 aa19.3■□□□□ 0.68
NCKIPSD-201ENST00000294129 ADCY9O60503 1353 aa19.29■□□□□ 0.68
NCKIPSD-201ENST00000294129 USP54Q70EL1 1684 aa19.29■□□□□ 0.68
NCKIPSD-201ENST00000294129 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
NCKIPSD-201ENST00000294129 NCLP19338 710 aaKnown RBP19.29■□□□□ 0.68
NCKIPSD-201ENST00000294129 CHRNA2Q15822 529 aa19.29■□□□□ 0.68
NCKIPSD-201ENST00000294129 PA2G4Q9UQ80 394 aaKnown RBP19.29■□□□□ 0.68
NCKIPSD-201ENST00000294129 MYL6BP14649 208 aa19.29■□□□□ 0.68
NCKIPSD-201ENST00000294129 PIP4K2AP48426 406 aaPredicted RBP19.29■□□□□ 0.68
NCKIPSD-201ENST00000294129 BAG4O95429 457 aaKnown RBP19.28■□□□□ 0.68
NCKIPSD-201ENST00000294129 GOLGA6L22H0YM25 854 aa19.28■□□□□ 0.68
NCKIPSD-201ENST00000294129 RAPGEF4Q8WZA2 1011 aa19.28■□□□□ 0.68
NCKIPSD-201ENST00000294129 ATF3P18847 181 aa19.27■□□□□ 0.68
NCKIPSD-201ENST00000294129 MCCP23508 829 aa19.27■□□□□ 0.68
NCKIPSD-201ENST00000294129 HOXB7P09629 217 aa19.26■□□□□ 0.67
NCKIPSD-201ENST00000294129 KIF1BPQ96EK5 621 aa19.26■□□□□ 0.67
NCKIPSD-201ENST00000294129 DDX49Q9Y6V7 483 aaKnown RBP19.26■□□□□ 0.67
NCKIPSD-201ENST00000294129 PXDNLA1KZ92 1463 aa19.26■□□□□ 0.67
NCKIPSD-201ENST00000294129 POLA2Q14181 598 aa19.26■□□□□ 0.67
NCKIPSD-201ENST00000294129 C19orf44Q9H6X5 657 aa19.26■□□□□ 0.67
NCKIPSD-201ENST00000294129 STAP2Q9UGK3 403 aa19.26■□□□□ 0.67
NCKIPSD-201ENST00000294129 FSD2A1L4K1 749 aa19.26■□□□□ 0.67
NCKIPSD-201ENST00000294129 ERBB3P21860 1342 aa19.25■□□□□ 0.67
NCKIPSD-201ENST00000294129 ZNF142P52746 1687 aaPredicted RBP19.25■□□□□ 0.67
NCKIPSD-201ENST00000294129 RAB11FIP3O75154 756 aa19.25■□□□□ 0.67
NCKIPSD-201ENST00000294129 RGPD5Q99666 1765 aa19.24■□□□□ 0.67
NCKIPSD-201ENST00000294129 FOXD4L6Q3SYB3 417 aaPredicted RBP19.24■□□□□ 0.67
NCKIPSD-201ENST00000294129 FOXD4L3Q6VB84 417 aaPredicted RBP19.24■□□□□ 0.67
NCKIPSD-201ENST00000294129 NFATC2IPQ8NCF5 419 aa19.24■□□□□ 0.67
NCKIPSD-201ENST00000294129 TMX3Q96JJ7 454 aa19.24■□□□□ 0.67
NCKIPSD-201ENST00000294129 JARID2Q92833 1246 aaPredicted RBP19.24■□□□□ 0.67
NCKIPSD-201ENST00000294129 NUCB2P80303 420 aa19.23■□□□□ 0.67
NCKIPSD-201ENST00000294129 CWC27Q6UX04 472 aaKnown RBP19.23■□□□□ 0.67
NCKIPSD-201ENST00000294129 GAS2L3Q86XJ1 694 aa19.23■□□□□ 0.67
NCKIPSD-201ENST00000294129 KSR2Q6VAB6 950 aa19.23■□□□□ 0.67
NCKIPSD-201ENST00000294129 PI4K2BQ8TCG2 481 aa19.23■□□□□ 0.67
NCKIPSD-201ENST00000294129 LARP6Q9BRS8 491 aaKnown RBP19.23■□□□□ 0.67
NCKIPSD-201ENST00000294129 SIL1Q9H173 461 aa19.23■□□□□ 0.67
NCKIPSD-201ENST00000294129 KDM3BQ7LBC6 1761 aa19.23■□□□□ 0.67
NCKIPSD-201ENST00000294129 C1orf167Q5SNV9 1468 aa19.23■□□□□ 0.67
NCKIPSD-201ENST00000294129 FAM43AQ8N2R8 423 aa19.23■□□□□ 0.67
NCKIPSD-201ENST00000294129 GRPEL1Q9HAV7 217 aa19.23■□□□□ 0.67
NCKIPSD-201ENST00000294129 MED1Q15648 1581 aaPredicted RBP19.22■□□□□ 0.67
NCKIPSD-201ENST00000294129 RIC3Q7Z5B4 369 aa19.22■□□□□ 0.67
NCKIPSD-201ENST00000294129 CHMP4AQ9BY43 222 aa19.22■□□□□ 0.67
NCKIPSD-201ENST00000294129 SPG7Q9UQ90 795 aa19.22■□□□□ 0.67
NCKIPSD-201ENST00000294129 ADAMTSL3P82987 1691 aa19.2■□□□□ 0.66
NCKIPSD-201ENST00000294129 LMO7Q8WWI1 1683 aa19.2■□□□□ 0.66
NCKIPSD-201ENST00000294129 CLASRPQ8N2M8 674 aaKnown RBP19.2■□□□□ 0.66
NCKIPSD-201ENST00000294129 KLHDC4Q8TBB5 520 aa19.2■□□□□ 0.66
NCKIPSD-201ENST00000294129 TATP17735 454 aaPredicted RBP19.2■□□□□ 0.66
NCKIPSD-201ENST00000294129 SKOR2Q2VWA4 1001 aaPredicted RBP19.2■□□□□ 0.66
NCKIPSD-201ENST00000294129 ZNF790Q6PG37 636 aa19.2■□□□□ 0.66
NCKIPSD-201ENST00000294129 CNTROBQ8N137 903 aa19.2■□□□□ 0.66
NCKIPSD-201ENST00000294129 MRE11P49959 708 aa19.2■□□□□ 0.66
NCKIPSD-201ENST00000294129 SUCLG2Q96I99 432 aa19.2■□□□□ 0.66
NCKIPSD-201ENST00000294129 DTNBO60941 627 aa19.19■□□□□ 0.66
NCKIPSD-201ENST00000294129 PRPF40AO75400 957 aaKnown RBP19.19■□□□□ 0.66
NCKIPSD-201ENST00000294129 BICC1Q9H694 974 aaKnown RBP19.19■□□□□ 0.66
NCKIPSD-201ENST00000294129 HYPKQ9NX55 129 aa19.19■□□□□ 0.66
NCKIPSD-201ENST00000294129 TMEM94Q12767 1356 aa19.19■□□□□ 0.66
NCKIPSD-201ENST00000294129 IFIT2P09913 472 aaKnown RBP19.19■□□□□ 0.66
NCKIPSD-201ENST00000294129 CAVIN1Q6NZI2 390 aaKnown RBP19.19■□□□□ 0.66
NCKIPSD-201ENST00000294129 AACSQ86V21 672 aa19.19■□□□□ 0.66
NCKIPSD-201ENST00000294129 CWC22Q9HCG8 908 aaKnown RBP19.19■□□□□ 0.66
NCKIPSD-201ENST00000294129 ZDHHC9Q9Y397 364 aa19.19■□□□□ 0.66
NCKIPSD-201ENST00000294129 SLIT3O75094 1523 aa19.18■□□□□ 0.66
NCKIPSD-201ENST00000294129 GRM8O00222 908 aa19.18■□□□□ 0.66
NCKIPSD-201ENST00000294129 TPRNQ4KMQ1 711 aa19.18■□□□□ 0.66
NCKIPSD-201ENST00000294129 HSP90AB4PQ58FF6 505 aa19.18■□□□□ 0.66
NCKIPSD-201ENST00000294129 DDX58O95786 925 aaKnown RBP19.18■□□□□ 0.66
NCKIPSD-201ENST00000294129 HSPA2P54652 639 aa19.18■□□□□ 0.66
NCKIPSD-201ENST00000294129 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.18■□□□□ 0.66
NCKIPSD-201ENST00000294129 NPHP3Q7Z494 1330 aa19.18■□□□□ 0.66
NCKIPSD-201ENST00000294129 XAGE3Q8WTP9 111 aa19.17■□□□□ 0.66
NCKIPSD-201ENST00000294129 ZNF496Q96IT1 587 aaPredicted RBP19.17■□□□□ 0.66
NCKIPSD-201ENST00000294129 DDX21Q9NR30 783 aaKnown RBP eCLIP19.17■□□□□ 0.66
NCKIPSD-201ENST00000294129 KIAA1211Q6ZU35 1233 aa19.17■□□□□ 0.66
NCKIPSD-201ENST00000294129 CCDC8Q9H0W5 538 aaPredicted RBP19.17■□□□□ 0.66
NCKIPSD-201ENST00000294129 COPS6Q7L5N1 327 aa19.17■□□□□ 0.66
NCKIPSD-201ENST00000294129 DDX54Q8TDD1 881 aaKnown RBP19.17■□□□□ 0.66
NCKIPSD-201ENST00000294129 SLC52A2Q9HAB3 445 aa19.17■□□□□ 0.66
NCKIPSD-201ENST00000294129 DIAPH3Q9NSV4 1193 aa19.17■□□□□ 0.66
NCKIPSD-201ENST00000294129 NCAPD2Q15021 1401 aa19.17■□□□□ 0.66
NCKIPSD-201ENST00000294129 AOX1Q06278 1338 aa19.16■□□□□ 0.66
NCKIPSD-201ENST00000294129 TUBGCP6Q96RT7 1819 aa19.16■□□□□ 0.66
NCKIPSD-201ENST00000294129 ALDH1L1O75891 902 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms