RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 ARFGEF1Q9Y6D6 1849 aa23.22■■□□□ 1.31
TFF3-201ENST00000291525 FCHSD2O94868 740 aa23.22■■□□□ 1.31
TFF3-201ENST00000291525 PRKAR2BP31323 418 aa23.22■■□□□ 1.31
TFF3-201ENST00000291525 DDR1Q08345 913 aa23.22■■□□□ 1.31
TFF3-201ENST00000291525 TEX13AQ9BXU3 409 aaPredicted RBP23.22■■□□□ 1.31
TFF3-201ENST00000291525 NARFQ9UHQ1 456 aa23.22■■□□□ 1.31
TFF3-201ENST00000291525 ZNF790Q6PG37 636 aa23.21■■□□□ 1.31
TFF3-201ENST00000291525 IL17REQ8NFR9 667 aa23.21■■□□□ 1.31
TFF3-201ENST00000291525 POLRMTO00411 1230 aaKnown RBP23.2■■□□□ 1.3
TFF3-201ENST00000291525 PPP2R1AP30153 589 aa23.2■■□□□ 1.3
TFF3-201ENST00000291525 TM4SF1P30408 202 aa23.2■■□□□ 1.3
TFF3-201ENST00000291525 RSPH6AQ9H0K4 717 aa23.2■■□□□ 1.3
TFF3-201ENST00000291525 PIM2Q9P1W9 311 aa23.2■■□□□ 1.3
TFF3-201ENST00000291525 CEMIPQ8WUJ3 1361 aa23.19■■□□□ 1.3
TFF3-201ENST00000291525 HEG1Q9ULI3 1381 aa23.19■■□□□ 1.3
TFF3-201ENST00000291525 A0A087WZG4 1122 aa23.19■■□□□ 1.3
TFF3-201ENST00000291525 U2AF1L5P0DN76 240 aaPredicted RBP23.19■■□□□ 1.3
TFF3-201ENST00000291525 U2AF1Q01081 240 aaKnown RBP eCLIP23.19■■□□□ 1.3
TFF3-201ENST00000291525 ARHGAP27Q6ZUM4 889 aa23.19■■□□□ 1.3
TFF3-201ENST00000291525 ZNF526Q8TF50 670 aaPredicted RBP23.19■■□□□ 1.3
TFF3-201ENST00000291525 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
TFF3-201ENST00000291525 FMNL2Q96PY5 1086 aa23.18■■□□□ 1.3
TFF3-201ENST00000291525 AFDNP55196 1824 aaKnown RBP23.17■■□□□ 1.3
TFF3-201ENST00000291525 DALRD3Q5D0E6 543 aaKnown RBP23.17■■□□□ 1.3
TFF3-201ENST00000291525 ZNF496Q96IT1 587 aaPredicted RBP23.17■■□□□ 1.3
TFF3-201ENST00000291525 KCNA3P22001 575 aa23.16■■□□□ 1.3
TFF3-201ENST00000291525 NPM2Q86SE8 214 aaKnown RBP23.16■■□□□ 1.3
TFF3-201ENST00000291525 RTF1Q92541 710 aaKnown RBP23.16■■□□□ 1.3
TFF3-201ENST00000291525 PHACTR3Q96KR7 559 aa23.16■■□□□ 1.3
TFF3-201ENST00000291525 NRXN2Q9P2S2 1712 aa23.16■■□□□ 1.3
TFF3-201ENST00000291525 BTBD11A6QL63 1104 aa23.15■■□□□ 1.3
TFF3-201ENST00000291525 NFIXQ14938 502 aa23.15■■□□□ 1.3
TFF3-201ENST00000291525 EIF5P55010 431 aaKnown RBP23.14■■□□□ 1.29
TFF3-201ENST00000291525 SCN7AQ01118 1682 aa23.13■■□□□ 1.29
TFF3-201ENST00000291525 NEFMP07197 916 aa23.12■■□□□ 1.29
TFF3-201ENST00000291525 CHRNA5P30532 468 aa23.12■■□□□ 1.29
TFF3-201ENST00000291525 BCL2L12Q9HB09 334 aa23.12■■□□□ 1.29
TFF3-201ENST00000291525 SERPINB2P05120 415 aa23.11■■□□□ 1.29
TFF3-201ENST00000291525 IL6STP40189 918 aaPredicted RBP23.11■■□□□ 1.29
TFF3-201ENST00000291525 ZNF330Q9Y3S2 320 aaPredicted RBP23.11■■□□□ 1.29
TFF3-201ENST00000291525 DLEC1Q9Y238 1755 aa23.1■■□□□ 1.29
TFF3-201ENST00000291525 HTATSF1O43719 755 aaKnown RBP23.09■■□□□ 1.29
TFF3-201ENST00000291525 C9orf131Q5VYM1 1079 aa23.07■■□□□ 1.28
TFF3-201ENST00000291525 BICDL1Q6ZP65 573 aa23.07■■□□□ 1.28
TFF3-201ENST00000291525 MCM10Q7L590 875 aa23.07■■□□□ 1.28
TFF3-201ENST00000291525 PDZRN3Q9UPQ7 1066 aa23.06■■□□□ 1.28
TFF3-201ENST00000291525 CARMIL3Q8ND23 1372 aa23.05■■□□□ 1.28
TFF3-201ENST00000291525 KIF3CO14782 793 aa23.05■■□□□ 1.28
TFF3-201ENST00000291525 KCNQ3O43525 872 aa23.05■■□□□ 1.28
TFF3-201ENST00000291525 A1BGP04217 495 aa23.05■■□□□ 1.28
TFF3-201ENST00000291525 SNRPA1P09661 255 aaKnown RBP23.05■■□□□ 1.28
TFF3-201ENST00000291525 TBC1D2BQ9UPU7 963 aa23.05■■□□□ 1.28
TFF3-201ENST00000291525 BCORQ6W2J9 1755 aa23.04■■□□□ 1.28
TFF3-201ENST00000291525 H0YIN7 160 aa23.04■■□□□ 1.28
TFF3-201ENST00000291525 TBC1D9BQ66K14 1250 aa23.04■■□□□ 1.28
TFF3-201ENST00000291525 C2CD5Q86YS7 1000 aa23.04■■□□□ 1.28
TFF3-201ENST00000291525 SBF1O95248 1867 aa23.03■■□□□ 1.28
TFF3-201ENST00000291525 TTLL6Q8N841 843 aa23.03■■□□□ 1.28
TFF3-201ENST00000291525 PNNQ9H307 717 aaKnown RBP23.03■■□□□ 1.28
TFF3-201ENST00000291525 RNF181Q9P0P0 153 aa23.03■■□□□ 1.28
TFF3-201ENST00000291525 NPHP1O15259 732 aa23.02■■□□□ 1.28
TFF3-201ENST00000291525 HSPA6P17066 643 aa23.02■■□□□ 1.28
TFF3-201ENST00000291525 DZIP3Q86Y13 1208 aaKnown RBP23.02■■□□□ 1.28
TFF3-201ENST00000291525 SETDB2Q96T68 719 aa23.02■■□□□ 1.28
TFF3-201ENST00000291525 DLG5Q8TDM6 1919 aa23.02■■□□□ 1.28
TFF3-201ENST00000291525 PDE6BP35913 854 aa23.01■■□□□ 1.27
TFF3-201ENST00000291525 DCTN1Q14203 1278 aa23.01■■□□□ 1.27
TFF3-201ENST00000291525 TAF7Q15545 349 aaPredicted RBP23.01■■□□□ 1.27
TFF3-201ENST00000291525 USP16Q9Y5T5 823 aa23.01■■□□□ 1.27
TFF3-201ENST00000291525 KDM2BQ8NHM5 1336 aa23.01■■□□□ 1.27
TFF3-201ENST00000291525 ANKRD31Q8N7Z5 1873 aa23■■□□□ 1.27
TFF3-201ENST00000291525 CAMTA2O94983 1202 aa23■■□□□ 1.27
TFF3-201ENST00000291525 BRIP1Q9BX63 1249 aa23■■□□□ 1.27
TFF3-201ENST00000291525 ZNF652Q9Y2D9 606 aa23■■□□□ 1.27
TFF3-201ENST00000291525 TOMM70O94826 608 aa22.99■■□□□ 1.27
TFF3-201ENST00000291525 PNISRQ8TF01 805 aaKnown RBP22.99■■□□□ 1.27
TFF3-201ENST00000291525 ZC3H4Q9UPT8 1303 aaKnown RBP22.99■■□□□ 1.27
TFF3-201ENST00000291525 LAMB4A4D0S4 1761 aa22.99■■□□□ 1.27
TFF3-201ENST00000291525 ST5P78524 1137 aa22.98■■□□□ 1.27
TFF3-201ENST00000291525 PRR5LQ6MZQ0 368 aa22.98■■□□□ 1.27
TFF3-201ENST00000291525 CNBD1Q8NA66 436 aa22.98■■□□□ 1.27
TFF3-201ENST00000291525 MAPK8IP3Q9UPT6 1336 aa22.98■■□□□ 1.27
TFF3-201ENST00000291525 CLEC4GQ6UXB4 293 aa22.97■■□□□ 1.27
TFF3-201ENST00000291525 C16orf71Q8IYS4 520 aaPredicted RBP22.97■■□□□ 1.27
TFF3-201ENST00000291525 NMRK2Q9NPI5 230 aa22.97■■□□□ 1.27
TFF3-201ENST00000291525 TNRC6CQ9HCJ0 1690 aaKnown RBP22.97■■□□□ 1.27
TFF3-201ENST00000291525 PRAMEF22A3QJZ6 481 aa22.96■■□□□ 1.27
TFF3-201ENST00000291525 ZNF622Q969S3 477 aaKnown RBP eCLIP22.96■■□□□ 1.27
TFF3-201ENST00000291525 RGL2O15211 777 aa22.95■■□□□ 1.26
TFF3-201ENST00000291525 COL11A2P13942 1736 aaPredicted RBP22.95■■□□□ 1.26
TFF3-201ENST00000291525 LMNB1P20700 586 aa22.95■■□□□ 1.26
TFF3-201ENST00000291525 RASSF7Q02833 373 aa22.95■■□□□ 1.26
TFF3-201ENST00000291525 NFE2L2Q16236 605 aa22.95■■□□□ 1.26
TFF3-201ENST00000291525 KDM3BQ7LBC6 1761 aa22.95■■□□□ 1.26
TFF3-201ENST00000291525 PIP4K2AP48426 406 aaPredicted RBP22.94■■□□□ 1.26
TFF3-201ENST00000291525 RALBP1Q15311 655 aa22.94■■□□□ 1.26
TFF3-201ENST00000291525 PLEKHF1Q96S99 279 aa22.94■■□□□ 1.26
TFF3-201ENST00000291525 CCDC88AQ3V6T2 1871 aa22.93■■□□□ 1.26
TFF3-201ENST00000291525 NBPF5PQ86XG9 351 aaPredicted RBP22.92■■□□□ 1.26
TFF3-201ENST00000291525 RBM46Q8TBY0 533 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms