RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 FBXO31Q5XUX0 539 aaPredicted RBP20.44■□□□□ 0.86
PCDHA13-201ENST00000289272 LIMCH1Q9UPQ0 1083 aa20.44■□□□□ 0.86
PCDHA13-201ENST00000289272 BTBD11A6QL63 1104 aa20.44■□□□□ 0.86
PCDHA13-201ENST00000289272 POLR3AO14802 1390 aaPredicted RBP20.44■□□□□ 0.86
PCDHA13-201ENST00000289272 STX1AQ16623 288 aa20.44■□□□□ 0.86
PCDHA13-201ENST00000289272 JAKMIP1Q96N16 626 aaKnown RBP20.44■□□□□ 0.86
PCDHA13-201ENST00000289272 MX1P20591 662 aa20.44■□□□□ 0.86
PCDHA13-201ENST00000289272 WASF1Q92558 559 aa20.43■□□□□ 0.86
PCDHA13-201ENST00000289272 PRM3Q9NNZ6 103 aa20.43■□□□□ 0.86
PCDHA13-201ENST00000289272 CTNNA3Q9UI47 895 aa20.43■□□□□ 0.86
PCDHA13-201ENST00000289272 ZSCAN25Q6NSZ9 544 aa20.43■□□□□ 0.86
PCDHA13-201ENST00000289272 AACSQ86V21 672 aa20.43■□□□□ 0.86
PCDHA13-201ENST00000289272 TTLL5Q6EMB2 1281 aa20.43■□□□□ 0.86
PCDHA13-201ENST00000289272 PIK3C2GO75747 1445 aa20.43■□□□□ 0.86
PCDHA13-201ENST00000289272 ZMYM3Q14202 1370 aa20.42■□□□□ 0.86
PCDHA13-201ENST00000289272 SIL1Q9H173 461 aa20.42■□□□□ 0.86
PCDHA13-201ENST00000289272 NOL7Q9UMY1 257 aaKnown RBP20.42■□□□□ 0.86
PCDHA13-201ENST00000289272 RAD21O60216 631 aa20.42■□□□□ 0.86
PCDHA13-201ENST00000289272 ANAPC15P60006 121 aa20.42■□□□□ 0.86
PCDHA13-201ENST00000289272 CNNM1Q9NRU3 951 aa20.42■□□□□ 0.86
PCDHA13-201ENST00000289272 DMRT2Q9Y5R5 561 aa20.42■□□□□ 0.86
PCDHA13-201ENST00000289272 PTPRCP08575 1304 aa20.41■□□□□ 0.86
PCDHA13-201ENST00000289272 PER1O15534 1290 aaPredicted RBP20.41■□□□□ 0.86
PCDHA13-201ENST00000289272 TRIM22Q8IYM9 498 aa20.41■□□□□ 0.86
PCDHA13-201ENST00000289272 KIF1BPQ96EK5 621 aa20.41■□□□□ 0.86
PCDHA13-201ENST00000289272 ZNF397Q8NF99 534 aaPredicted RBP20.41■□□□□ 0.86
PCDHA13-201ENST00000289272 ADGRL2O95490 1459 aa20.41■□□□□ 0.86
PCDHA13-201ENST00000289272 SMARCA5O60264 1052 aaPredicted RBP20.41■□□□□ 0.86
PCDHA13-201ENST00000289272 SF3B2Q13435 895 aaKnown RBP20.41■□□□□ 0.86
PCDHA13-201ENST00000289272 SNW1Q13573 536 aaKnown RBP20.41■□□□□ 0.86
PCDHA13-201ENST00000289272 IMMTQ16891 758 aaKnown RBP20.41■□□□□ 0.86
PCDHA13-201ENST00000289272 CWC27Q6UX04 472 aaKnown RBP20.4■□□□□ 0.86
PCDHA13-201ENST00000289272 CEP131Q9UPN4 1083 aa20.4■□□□□ 0.86
PCDHA13-201ENST00000289272 HMGB1P09429 215 aaKnown RBP20.4■□□□□ 0.86
PCDHA13-201ENST00000289272 TTC39AQ5SRH9 613 aa20.4■□□□□ 0.86
PCDHA13-201ENST00000289272 PHF8Q9UPP1 1060 aa20.4■□□□□ 0.86
PCDHA13-201ENST00000289272 GLRX3O76003 335 aaKnown RBP20.4■□□□□ 0.86
PCDHA13-201ENST00000289272 URI1O94763 535 aaPredicted RBP20.4■□□□□ 0.86
PCDHA13-201ENST00000289272 GABPB1Q06547 395 aaPredicted RBP20.4■□□□□ 0.86
PCDHA13-201ENST00000289272 CFAP100Q494V2 611 aa20.4■□□□□ 0.86
PCDHA13-201ENST00000289272 POLR3GO15318 223 aaPredicted RBP20.4■□□□□ 0.86
PCDHA13-201ENST00000289272 DDX54Q8TDD1 881 aaKnown RBP20.4■□□□□ 0.86
PCDHA13-201ENST00000289272 C16orf45Q96MC5 204 aaPredicted RBP20.4■□□□□ 0.86
PCDHA13-201ENST00000289272 TAF7Q15545 349 aaPredicted RBP20.39■□□□□ 0.86
PCDHA13-201ENST00000289272 TBC1D9Q6ZT07 1266 aa20.39■□□□□ 0.86
PCDHA13-201ENST00000289272 PDE4CQ08493 712 aa20.39■□□□□ 0.85
PCDHA13-201ENST00000289272 ARHGAP45Q92619 1136 aa20.39■□□□□ 0.85
PCDHA13-201ENST00000289272 TTC21BQ7Z4L5 1316 aa20.39■□□□□ 0.85
PCDHA13-201ENST00000289272 BCL11BQ9C0K0 894 aaPredicted RBP20.39■□□□□ 0.85
PCDHA13-201ENST00000289272 V9GYY5 206 aaPredicted RBP20.39■□□□□ 0.85
PCDHA13-201ENST00000289272 COL17A1Q9UMD9 1497 aaPredicted RBP20.39■□□□□ 0.85
PCDHA13-201ENST00000289272 TRAPPC8Q9Y2L5 1435 aa20.39■□□□□ 0.85
PCDHA13-201ENST00000289272 RNF123Q5XPI4 1314 aa20.39■□□□□ 0.85
PCDHA13-201ENST00000289272 TUBBP07437 444 aa20.39■□□□□ 0.85
PCDHA13-201ENST00000289272 GTF2F1P35269 517 aaKnown RBP eCLIP20.39■□□□□ 0.85
PCDHA13-201ENST00000289272 NUCB1Q02818 461 aa20.39■□□□□ 0.85
PCDHA13-201ENST00000289272 AMOTL2Q9Y2J4 779 aa20.39■□□□□ 0.85
PCDHA13-201ENST00000289272 SAMD9Q5K651 1589 aa20.38■□□□□ 0.85
PCDHA13-201ENST00000289272 TOP1P11387 765 aaKnown RBP20.38■□□□□ 0.85
PCDHA13-201ENST00000289272 NUTM1Q86Y26 1132 aa20.38■□□□□ 0.85
PCDHA13-201ENST00000289272 MPNDQ8N594 471 aa20.38■□□□□ 0.85
PCDHA13-201ENST00000289272 PUS7Q96PZ0 661 aaKnown RBP20.38■□□□□ 0.85
PCDHA13-201ENST00000289272 MBIPQ9NS73 344 aa20.38■□□□□ 0.85
PCDHA13-201ENST00000289272 NACAP1Q9BZK3 213 aa20.38■□□□□ 0.85
PCDHA13-201ENST00000289272 PCDHB15Q9Y5E8 787 aa20.38■□□□□ 0.85
PCDHA13-201ENST00000289272 ZNF518AQ6AHZ1 1483 aa20.38■□□□□ 0.85
PCDHA13-201ENST00000289272 STARD3NLO95772 234 aa20.37■□□□□ 0.85
PCDHA13-201ENST00000289272 CASTP20810 708 aaKnown RBP20.37■□□□□ 0.85
PCDHA13-201ENST00000289272 MYL6BP14649 208 aa20.37■□□□□ 0.85
PCDHA13-201ENST00000289272 CCDC43Q96MW1 224 aaKnown RBP20.37■□□□□ 0.85
PCDHA13-201ENST00000289272 A2MP01023 1474 aa20.37■□□□□ 0.85
PCDHA13-201ENST00000289272 TNRQ92752 1358 aa20.37■□□□□ 0.85
PCDHA13-201ENST00000289272 CCDC57Q2TAC2 916 aa20.37■□□□□ 0.85
PCDHA13-201ENST00000289272 FAM200AQ8TCP9 573 aa20.37■□□□□ 0.85
PCDHA13-201ENST00000289272 DISP1Q96F81 1524 aa20.36■□□□□ 0.85
PCDHA13-201ENST00000289272 STX6O43752 255 aa20.36■□□□□ 0.85
PCDHA13-201ENST00000289272 BBXQ8WY36 941 aaPredicted RBP20.36■□□□□ 0.85
PCDHA13-201ENST00000289272 GOLGA6L10A0A0M3HER8 536 aa20.36■□□□□ 0.85
PCDHA13-201ENST00000289272 FYB1O15117 783 aa20.36■□□□□ 0.85
PCDHA13-201ENST00000289272 HSP90AB2PQ58FF8 381 aa20.36■□□□□ 0.85
PCDHA13-201ENST00000289272 CT47A1Q5JQC4 288 aaPredicted RBP20.36■□□□□ 0.85
PCDHA13-201ENST00000289272 CEBPZQ03701 1054 aaKnown RBP20.36■□□□□ 0.85
PCDHA13-201ENST00000289272 PANK2Q9BZ23 570 aa20.36■□□□□ 0.85
PCDHA13-201ENST00000289272 STK3Q13188 491 aa20.35■□□□□ 0.85
PCDHA13-201ENST00000289272 ASXL2Q76L83 1435 aa20.35■□□□□ 0.85
PCDHA13-201ENST00000289272 F6X3S4 739 aa20.35■□□□□ 0.85
PCDHA13-201ENST00000289272 GTF2A1P52655 376 aaPredicted RBP20.35■□□□□ 0.85
PCDHA13-201ENST00000289272 ANKRD18AQ8IVF6 992 aa20.35■□□□□ 0.85
PCDHA13-201ENST00000289272 SMARCC1Q92922 1105 aaPredicted RBP20.35■□□□□ 0.85
PCDHA13-201ENST00000289272 WDR7Q9Y4E6 1490 aa20.35■□□□□ 0.85
PCDHA13-201ENST00000289272 TTC22Q5TAA0 569 aa20.34■□□□□ 0.85
PCDHA13-201ENST00000289272 SLU7O95391 586 aaKnown RBP20.34■□□□□ 0.85
PCDHA13-201ENST00000289272 FAM193AP78312 1265 aa20.34■□□□□ 0.85
PCDHA13-201ENST00000289272 MPHOSPH8Q99549 860 aa20.34■□□□□ 0.85
PCDHA13-201ENST00000289272 LUZP1Q86V48 1076 aa20.33■□□□□ 0.85
PCDHA13-201ENST00000289272 ABCA5Q8WWZ7 1642 aa20.33■□□□□ 0.85
PCDHA13-201ENST00000289272 DCAF8L1A6NGE4 600 aa20.33■□□□□ 0.85
PCDHA13-201ENST00000289272 NUTM2BA6NNL0 878 aaPredicted RBP20.33■□□□□ 0.85
PCDHA13-201ENST00000289272 NUTM2EB1AL46 878 aaPredicted RBP20.33■□□□□ 0.85
PCDHA13-201ENST00000289272 NUTM2AQ8IVF1 878 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms