RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 DNAAF4Q8WXU2 420 aa8.38□□□□□ -1.07
VPS8-201ENST00000287546 DIAPH3Q9NSV4 1193 aa8.38□□□□□ -1.07
VPS8-201ENST00000287546 CNTROBQ8N137 903 aa8.38□□□□□ -1.07
VPS8-201ENST00000287546 DCTPP1Q9H773 170 aa8.38□□□□□ -1.07
VPS8-201ENST00000287546 LRRFIP1Q32MZ4 808 aaKnown RBP8.38□□□□□ -1.07
VPS8-201ENST00000287546 SKAP1Q86WV1 359 aa8.38□□□□□ -1.07
VPS8-201ENST00000287546 SPRYD3Q8NCJ5 442 aa8.38□□□□□ -1.07
VPS8-201ENST00000287546 HIP1O00291 1037 aa8.37□□□□□ -1.07
VPS8-201ENST00000287546 LARP1Q6PKG0 1096 aaKnown RBP8.37□□□□□ -1.07
VPS8-201ENST00000287546 UBAP1LF5GYI3 381 aa8.37□□□□□ -1.07
VPS8-201ENST00000287546 NOP2P46087 812 aaKnown RBP8.37□□□□□ -1.07
VPS8-201ENST00000287546 SKOR2Q2VWA4 1001 aaPredicted RBP8.37□□□□□ -1.07
VPS8-201ENST00000287546 MPRIPQ6WCQ1 1025 aa8.37□□□□□ -1.07
VPS8-201ENST00000287546 KIF1BPQ96EK5 621 aa8.37□□□□□ -1.07
VPS8-201ENST00000287546 SLAIN2Q9P270 581 aa8.37□□□□□ -1.07
VPS8-201ENST00000287546 DHX16O60231 1041 aaKnown RBP8.37□□□□□ -1.07
VPS8-201ENST00000287546 CIZ1Q9ULV3 898 aaPredicted RBP8.37□□□□□ -1.07
VPS8-201ENST00000287546 NFKBIBQ15653 356 aa8.37□□□□□ -1.07
VPS8-201ENST00000287546 ALDH1L1O75891 902 aa8.36□□□□□ -1.07
VPS8-201ENST00000287546 NUCB2P80303 420 aa8.36□□□□□ -1.07
VPS8-201ENST00000287546 TMEM132AQ24JP5 1023 aa8.36□□□□□ -1.07
VPS8-201ENST00000287546 CABLES1Q8TDN4 633 aa8.36□□□□□ -1.07
VPS8-201ENST00000287546 SRGAP3O43295 1099 aa8.36□□□□□ -1.07
VPS8-201ENST00000287546 PTMAP06454 111 aaKnown RBP8.36□□□□□ -1.07
VPS8-201ENST00000287546 F6X3S4 739 aa8.36□□□□□ -1.07
VPS8-201ENST00000287546 AIMP1Q12904 312 aaKnown RBP8.36□□□□□ -1.07
VPS8-201ENST00000287546 CHMP4CQ96CF2 233 aa8.36□□□□□ -1.07
VPS8-201ENST00000287546 FMNL2Q96PY5 1086 aa8.36□□□□□ -1.07
VPS8-201ENST00000287546 ANO2Q9NQ90 1003 aa8.36□□□□□ -1.07
VPS8-201ENST00000287546 MON2Q7Z3U7 1717 aa8.35□□□□□ -1.07
VPS8-201ENST00000287546 CEP85Q6P2H3 762 aa8.35□□□□□ -1.07
VPS8-201ENST00000287546 MEIS3Q99687 375 aa8.35□□□□□ -1.07
VPS8-201ENST00000287546 MX1P20591 662 aa8.35□□□□□ -1.07
VPS8-201ENST00000287546 TTC22Q5TAA0 569 aa8.35□□□□□ -1.07
VPS8-201ENST00000287546 RNMTO43148 476 aaKnown RBP8.35□□□□□ -1.07
VPS8-201ENST00000287546 ZKSCAN1P17029 563 aaPredicted RBP8.35□□□□□ -1.07
VPS8-201ENST00000287546 GSE1Q14687 1217 aa8.35□□□□□ -1.07
VPS8-201ENST00000287546 NCAPD2Q15021 1401 aa8.35□□□□□ -1.07
VPS8-201ENST00000287546 ZNF142P52746 1687 aaPredicted RBP8.35□□□□□ -1.07
VPS8-201ENST00000287546 KDRP35968 1356 aa8.35□□□□□ -1.07
VPS8-201ENST00000287546 ATP8B2P98198 1209 aa8.34□□□□□ -1.07
VPS8-201ENST00000287546 RNF20Q5VTR2 975 aa8.34□□□□□ -1.07
VPS8-201ENST00000287546 ARHGEF25Q86VW2 580 aa8.34□□□□□ -1.07
VPS8-201ENST00000287546 LRRFIP2Q9Y608 721 aaKnown RBP8.34□□□□□ -1.07
VPS8-201ENST00000287546 A0A0U1RQG5 324 aaPredicted RBP8.34□□□□□ -1.07
VPS8-201ENST00000287546 EXOC6BQ9Y2D4 811 aa8.34□□□□□ -1.07
VPS8-201ENST00000287546 SNRPA1P09661 255 aaKnown RBP8.34□□□□□ -1.08
VPS8-201ENST00000287546 NBPF6Q5VWK0 638 aa8.34□□□□□ -1.08
VPS8-201ENST00000287546 NBPF4Q96M43 638 aa8.34□□□□□ -1.08
VPS8-201ENST00000287546 K7ELQ4 463 aaPredicted RBP8.33□□□□□ -1.08
VPS8-201ENST00000287546 TTLL12Q14166 644 aaPredicted RBP8.33□□□□□ -1.08
VPS8-201ENST00000287546 KRT24Q2M2I5 525 aa8.33□□□□□ -1.08
VPS8-201ENST00000287546 LRRC59Q96AG4 307 aaKnown RBP8.33□□□□□ -1.08
VPS8-201ENST00000287546 DCAF5Q96JK2 942 aa8.33□□□□□ -1.08
VPS8-201ENST00000287546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.33□□□□□ -1.081e-6■■■□□ 17.9
VPS8-201ENST00000287546 GLRX3O76003 335 aaKnown RBP8.33□□□□□ -1.08
VPS8-201ENST00000287546 HSP90B1P14625 803 aaKnown RBP8.33□□□□□ -1.08
VPS8-201ENST00000287546 GRM1Q13255 1194 aa8.33□□□□□ -1.08
VPS8-201ENST00000287546 CSPP1Q1MSJ5 1256 aa8.33□□□□□ -1.08
VPS8-201ENST00000287546 PI4KAP2A4QPH2 592 aa8.33□□□□□ -1.08
VPS8-201ENST00000287546 KSR2Q6VAB6 950 aa8.33□□□□□ -1.08
VPS8-201ENST00000287546 PI4KAP1Q8N8J0 262 aa8.33□□□□□ -1.08
VPS8-201ENST00000287546 SYAP1Q96A49 352 aaPredicted RBP8.33□□□□□ -1.08
VPS8-201ENST00000287546 AKAP12Q02952 1782 aa8.33□□□□□ -1.08
VPS8-201ENST00000287546 TBC1D9Q6ZT07 1266 aa8.32□□□□□ -1.08
VPS8-201ENST00000287546 STRN4Q9NRL3 753 aa8.32□□□□□ -1.08
VPS8-201ENST00000287546 BRINP3Q76B58 766 aa8.32□□□□□ -1.08
VPS8-201ENST00000287546 CHPF2Q9P2E5 772 aa8.32□□□□□ -1.08
VPS8-201ENST00000287546 ATP6V1DQ9Y5K8 247 aa8.32□□□□□ -1.08
VPS8-201ENST00000287546 KIF6Q6ZMV9 814 aa8.32□□□□□ -1.08
VPS8-201ENST00000287546 TEX13AQ9BXU3 409 aaPredicted RBP8.32□□□□□ -1.08
VPS8-201ENST00000287546 AKAP17AQ02040 695 aaKnown RBP8.32□□□□□ -1.08
VPS8-201ENST00000287546 IL17REQ8NFR9 667 aa8.32□□□□□ -1.08
VPS8-201ENST00000287546 TOM1O60784 492 aa8.31□□□□□ -1.08
VPS8-201ENST00000287546 PLCB2Q00722 1185 aa8.31□□□□□ -1.08
VPS8-201ENST00000287546 LINS1Q8NG48 757 aa8.31□□□□□ -1.08
VPS8-201ENST00000287546 NCOA3Q9Y6Q9 1424 aa8.31□□□□□ -1.08
VPS8-201ENST00000287546 DDX21Q9NR30 783 aaKnown RBP eCLIP8.31□□□□□ -1.08
VPS8-201ENST00000287546 KIF3AQ9Y496 699 aa8.31□□□□□ -1.08
VPS8-201ENST00000287546 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.31□□□□□ -1.08
VPS8-201ENST00000287546 EIF4A1P60842 406 aaKnown RBP8.31□□□□□ -1.08
VPS8-201ENST00000287546 SNX21Q969T3 373 aa8.31□□□□□ -1.08
VPS8-201ENST00000287546 MAP3K2Q9Y2U5 619 aa8.31□□□□□ -1.08
VPS8-201ENST00000287546 AOX1Q06278 1338 aa8.31□□□□□ -1.08
VPS8-201ENST00000287546 GOLGA6L3A6NEY3 463 aa8.31□□□□□ -1.08
VPS8-201ENST00000287546 MYCNP04198 464 aaPredicted RBP8.31□□□□□ -1.08
VPS8-201ENST00000287546 MYL6BP14649 208 aa8.31□□□□□ -1.08
VPS8-201ENST00000287546 IKQ13123 557 aaPredicted RBP8.31□□□□□ -1.08
VPS8-201ENST00000287546 CHRNA2Q15822 529 aa8.31□□□□□ -1.08
VPS8-201ENST00000287546 TBC1D2Q9BYX2 928 aa8.31□□□□□ -1.08
VPS8-201ENST00000287546 PPP1R42Q7Z4L9 355 aa8.3□□□□□ -1.08
VPS8-201ENST00000287546 PLEKHM2Q8IWE5 1019 aa8.3□□□□□ -1.08
VPS8-201ENST00000287546 ZCRB1Q8TBF4 217 aaKnown RBP8.3□□□□□ -1.08
VPS8-201ENST00000287546 PCDH11XQ9BZA7 1347 aa8.3□□□□□ -1.08
VPS8-201ENST00000287546 PCDH11YQ9BZA8 1340 aa8.3□□□□□ -1.08
VPS8-201ENST00000287546 PSMA5P28066 241 aa8.3□□□□□ -1.08
VPS8-201ENST00000287546 PDE1AP54750 535 aa8.3□□□□□ -1.08
VPS8-201ENST00000287546 CCDC97Q96F63 343 aaPredicted RBP8.3□□□□□ -1.08
VPS8-201ENST00000287546 SETD1AO15047 1707 aaKnown RBP8.3□□□□□ -1.08
VPS8-201ENST00000287546 SMARCA5O60264 1052 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms