RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 DNAAF4Q8WXU2 420 aa27.67■■■□□ 2.02
CCDC7-201ENST00000277657 NWD2Q9ULI1 1742 aa27.67■■■□□ 2.02
CCDC7-201ENST00000277657 LAMB4A4D0S4 1761 aa27.66■■■□□ 2.02
CCDC7-201ENST00000277657 GNAI2P04899 355 aa27.65■■■□□ 2.02
CCDC7-201ENST00000277657 DCTPP1Q9H773 170 aa27.65■■■□□ 2.02
CCDC7-201ENST00000277657 BEND3Q5T5X7 828 aa27.64■■■□□ 2.02
CCDC7-201ENST00000277657 CHD1LQ86WJ1 897 aa27.64■■■□□ 2.02
CCDC7-201ENST00000277657 SRCIN1Q9C0H9 1055 aa27.64■■■□□ 2.02
CCDC7-201ENST00000277657 USP44Q9H0E7 712 aa27.64■■■□□ 2.02
CCDC7-201ENST00000277657 SLIT2O94813 1529 aa27.64■■■□□ 2.02
CCDC7-201ENST00000277657 TNS2Q63HR2 1409 aa27.64■■■□□ 2.02
CCDC7-201ENST00000277657 KCPQ6ZWJ8 1503 aa27.64■■■□□ 2.01
CCDC7-201ENST00000277657 NUTM2BA6NNL0 878 aaPredicted RBP27.64■■■□□ 2.01
CCDC7-201ENST00000277657 NUTM2EB1AL46 878 aaPredicted RBP27.64■■■□□ 2.01
CCDC7-201ENST00000277657 NUTM2AQ8IVF1 878 aaPredicted RBP27.64■■■□□ 2.01
CCDC7-201ENST00000277657 FBXO41Q8TF61 875 aa27.64■■■□□ 2.01
CCDC7-201ENST00000277657 SPATA31A1Q5TZJ5 1347 aa27.63■■■□□ 2.01
CCDC7-201ENST00000277657 KSR2Q6VAB6 950 aa27.63■■■□□ 2.01
CCDC7-201ENST00000277657 THRAP3Q9Y2W1 955 aaKnown RBP27.63■■■□□ 2.01
CCDC7-201ENST00000277657 USP16Q9Y5T5 823 aa27.63■■■□□ 2.01
CCDC7-201ENST00000277657 CDCA7Q9BWT1 371 aaPredicted RBP27.61■■■□□ 2.01
CCDC7-201ENST00000277657 LRP6O75581 1613 aa27.61■■■□□ 2.01
CCDC7-201ENST00000277657 JCADQ9P266 1359 aa27.61■■■□□ 2.01
CCDC7-201ENST00000277657 LRP10Q7Z4F1 713 aa27.6■■■□□ 2.01
CCDC7-201ENST00000277657 ANKRD45Q5TZF3 282 aa27.59■■■□□ 2.01
CCDC7-201ENST00000277657 LNPKQ9C0E8 428 aa27.59■■■□□ 2.01
CCDC7-201ENST00000277657 MAP3K2Q9Y2U5 619 aa27.59■■■□□ 2.01
CCDC7-201ENST00000277657 EXOC5O00471 708 aa27.59■■■□□ 2.01
CCDC7-201ENST00000277657 DDX58O95786 925 aaKnown RBP27.59■■■□□ 2.01
CCDC7-201ENST00000277657 HMMRO75330 724 aa27.58■■■□□ 2.01
CCDC7-201ENST00000277657 TMOD3Q9NYL9 352 aa27.58■■■□□ 2.01
CCDC7-201ENST00000277657 SPATA31A5Q5VU36 1347 aa27.57■■■□□ 2
CCDC7-201ENST00000277657 SPATA31A7Q8IWB4 1347 aa27.57■■■□□ 2
CCDC7-201ENST00000277657 ITGB4P16144 1822 aa27.57■■■□□ 2
CCDC7-201ENST00000277657 ERBB4Q15303 1308 aa27.57■■■□□ 2
CCDC7-201ENST00000277657 UBTFL1P0CB47 393 aaPredicted RBP27.57■■■□□ 2
CCDC7-201ENST00000277657 ALDH1L1O75891 902 aa27.56■■■□□ 2
CCDC7-201ENST00000277657 CERKQ8TCT0 537 aa27.56■■■□□ 2
CCDC7-201ENST00000277657 MYL6BP14649 208 aa27.55■■■□□ 2
CCDC7-201ENST00000277657 LRRFIP2Q9Y608 721 aaKnown RBP27.55■■■□□ 2
CCDC7-201ENST00000277657 ATP8B2P98198 1209 aa27.54■■■□□ 2
CCDC7-201ENST00000277657 IBTKQ9P2D0 1353 aaPredicted RBP27.54■■■□□ 2
CCDC7-201ENST00000277657 AIMP1Q12904 312 aaKnown RBP27.53■■■□□ 2
CCDC7-201ENST00000277657 XAGE3Q8WTP9 111 aa27.53■■■□□ 2
CCDC7-201ENST00000277657 PIGBQ92521 554 aa27.53■■■□□ 2
CCDC7-201ENST00000277657 COPS6Q7L5N1 327 aa27.53■■■□□ 2
CCDC7-201ENST00000277657 LINS1Q8NG48 757 aa27.52■■■□□ 2
CCDC7-201ENST00000277657 BCL9O00512 1426 aa27.51■■□□□ 1.99
CCDC7-201ENST00000277657 NBPF7P0C2Y1 421 aaPredicted RBP27.51■■□□□ 1.99
CCDC7-201ENST00000277657 BARGINQ6ZT62 677 aa27.51■■□□□ 1.99
CCDC7-201ENST00000277657 PTCD1O75127 700 aaKnown RBP27.51■■□□□ 1.99
CCDC7-201ENST00000277657 UNC5CLQ8IV45 518 aa27.5■■□□□ 1.99
CCDC7-201ENST00000277657 PNMA6EA0A0J9YXQ4 647 aa27.49■■□□□ 1.99
CCDC7-201ENST00000277657 RIC3Q7Z5B4 369 aa27.49■■□□□ 1.99
CCDC7-201ENST00000277657 DDB1Q16531 1140 aa27.49■■□□□ 1.99
CCDC7-201ENST00000277657 ATG3Q9NT62 314 aa27.49■■□□□ 1.99
CCDC7-201ENST00000277657 ASAP1Q9ULH1 1129 aa27.49■■□□□ 1.99
CCDC7-201ENST00000277657 NBPF26B4DH59 902 aa27.48■■□□□ 1.99
CCDC7-201ENST00000277657 NBPF14Q5TI25 921 aa27.48■■□□□ 1.99
CCDC7-201ENST00000277657 NBPF10Q6P3W6 841 aaKnown RBP27.48■■□□□ 1.99
CCDC7-201ENST00000277657 ANKRD13DQ6ZTN6 518 aa27.48■■□□□ 1.99
CCDC7-201ENST00000277657 VSIG10Q8N0Z9 540 aa27.48■■□□□ 1.99
CCDC7-201ENST00000277657 NBPF15Q8N660 670 aa27.48■■□□□ 1.99
CCDC7-201ENST00000277657 SPATA31A6Q5VVP1 1343 aa27.48■■□□□ 1.99
CCDC7-201ENST00000277657 BCL9LQ86UU0 1499 aa27.47■■□□□ 1.99
CCDC7-201ENST00000277657 ANP32AP39687 249 aaKnown RBP27.47■■□□□ 1.99
CCDC7-201ENST00000277657 PIP4K2AP48426 406 aaPredicted RBP27.47■■□□□ 1.99
CCDC7-201ENST00000277657 UTYO14607 1347 aa27.47■■□□□ 1.99
CCDC7-201ENST00000277657 CWF19L2Q2TBE0 894 aaKnown RBP27.47■■□□□ 1.99
CCDC7-201ENST00000277657 SSH3Q8TE77 659 aa27.47■■□□□ 1.99
CCDC7-201ENST00000277657 METTL22Q9BUU2 404 aaPredicted RBP27.47■■□□□ 1.99
CCDC7-201ENST00000277657 DOT1LQ8TEK3 1739 aa27.45■■□□□ 1.99
CCDC7-201ENST00000277657 IGKV5-2P06315 115 aa27.45■■□□□ 1.99
CCDC7-201ENST00000277657 ARFGEF2Q9Y6D5 1785 aa27.45■■□□□ 1.98
CCDC7-201ENST00000277657 FNBP4Q8N3X1 1017 aaPredicted RBP27.44■■□□□ 1.98
CCDC7-201ENST00000277657 C8orf37Q96NL8 207 aa27.44■■□□□ 1.98
CCDC7-201ENST00000277657 C9orf78Q9NZ63 289 aaPredicted RBP27.44■■□□□ 1.98
CCDC7-201ENST00000277657 NEXNQ0ZGT2 675 aa27.44■■□□□ 1.98
CCDC7-201ENST00000277657 POLA2Q14181 598 aa27.44■■□□□ 1.98
CCDC7-201ENST00000277657 VPS72Q15906 364 aa27.44■■□□□ 1.98
CCDC7-201ENST00000277657 NGLY1Q96IV0 654 aa27.44■■□□□ 1.98
CCDC7-201ENST00000277657 TEX13AQ9BXU3 409 aaPredicted RBP27.44■■□□□ 1.98
CCDC7-201ENST00000277657 CCDC9Q9Y3X0 531 aaKnown RBP27.44■■□□□ 1.98
CCDC7-201ENST00000277657 BMP2KLQ5H9B9 411 aa27.43■■□□□ 1.98
CCDC7-201ENST00000277657 ZBTB47Q9UFB7 747 aaPredicted RBP27.43■■□□□ 1.98
CCDC7-201ENST00000277657 HDAC5Q9UQL6 1122 aa27.43■■□□□ 1.98
CCDC7-201ENST00000277657 GRM8O00222 908 aa27.42■■□□□ 1.98
CCDC7-201ENST00000277657 A1BGP04217 495 aa27.42■■□□□ 1.98
CCDC7-201ENST00000277657 PPP1R42Q7Z4L9 355 aa27.42■■□□□ 1.98
CCDC7-201ENST00000277657 PLBD2Q8NHP8 589 aa27.42■■□□□ 1.98
CCDC7-201ENST00000277657 NEURL1BA8MQ27 555 aa27.42■■□□□ 1.98
CCDC7-201ENST00000277657 MTX1Q13505 466 aa27.42■■□□□ 1.98
CCDC7-201ENST00000277657 PLEKHM2Q8IWE5 1019 aa27.42■■□□□ 1.98
CCDC7-201ENST00000277657 MARCH10Q8NA82 808 aaPredicted RBP27.41■■□□□ 1.98
CCDC7-201ENST00000277657 MYD88Q99836 296 aa27.4■■□□□ 1.98
CCDC7-201ENST00000277657 EXOC6BQ9Y2D4 811 aa27.4■■□□□ 1.98
CCDC7-201ENST00000277657 PRIM1P49642 420 aaKnown RBP27.4■■□□□ 1.98
CCDC7-201ENST00000277657 NPM2Q86SE8 214 aaKnown RBP27.4■■□□□ 1.98
CCDC7-201ENST00000277657 NUP188Q5SRE5 1749 aa27.39■■□□□ 1.98
CCDC7-201ENST00000277657 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms