RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 BAG6P46379 1132 aa22.15■■□□□ 1.14
SKP2-201ENST00000274254 UPF1Q92900 1129 aaKnown RBP eCLIP22.15■■□□□ 1.142e-6■□□□□ 8.5
SKP2-201ENST00000274254 CCDC30Q5VVM6 783 aa22.14■■□□□ 1.13
SKP2-201ENST00000274254 LINC00116Q8NCU8 138 aa22.14■■□□□ 1.13
SKP2-201ENST00000274254 RARSP54136 660 aaKnown RBP22.13■■□□□ 1.13
SKP2-201ENST00000274254 EN1Q05925 392 aaPredicted RBP22.13■■□□□ 1.13
SKP2-201ENST00000274254 ERBB4Q15303 1308 aa22.12■■□□□ 1.13
SKP2-201ENST00000274254 ALDH1L2Q3SY69 923 aa22.12■■□□□ 1.13
SKP2-201ENST00000274254 DEFB132Q7Z7B7 95 aa22.12■■□□□ 1.13
SKP2-201ENST00000274254 NECTIN2Q92692 538 aa22.12■■□□□ 1.13
SKP2-201ENST00000274254 MYH14Q7Z406 1995 aaKnown RBP22.12■■□□□ 1.13
SKP2-201ENST00000274254 RREB1Q92766 1687 aa22.12■■□□□ 1.13
SKP2-201ENST00000274254 SSH1Q8WYL5 1049 aa22.11■■□□□ 1.13
SKP2-201ENST00000274254 RCAN3Q9UKA8 241 aa22.11■■□□□ 1.13
SKP2-201ENST00000274254 A1BGP04217 495 aa22.11■■□□□ 1.13
SKP2-201ENST00000274254 CRKLP46109 303 aaKnown RBP22.11■■□□□ 1.13
SKP2-201ENST00000274254 PDIA6Q15084 440 aa22.11■■□□□ 1.13
SKP2-201ENST00000274254 EZH2Q15910 746 aaKnown RBP22.11■■□□□ 1.13
SKP2-201ENST00000274254 CHPF2Q9P2E5 772 aa22.11■■□□□ 1.13
SKP2-201ENST00000274254 CACNA1FO60840 1977 aa22.1■■□□□ 1.13
SKP2-201ENST00000274254 CNTNAP4Q9C0A0 1308 aa22.1■■□□□ 1.13
SKP2-201ENST00000274254 HMGB2P26583 209 aaKnown RBP22.1■■□□□ 1.13
SKP2-201ENST00000274254 INTS5Q6P9B9 1019 aaKnown RBP22.1■■□□□ 1.13
SKP2-201ENST00000274254 DBF4Q9UBU7 674 aaPredicted RBP22.1■■□□□ 1.13
SKP2-201ENST00000274254 C4BP0C0L5 1744 aa22.09■■□□□ 1.13
SKP2-201ENST00000274254 NBPF26B4DH59 902 aa22.09■■□□□ 1.13
SKP2-201ENST00000274254 TCERG1O14776 1098 aaKnown RBP22.09■■□□□ 1.13
SKP2-201ENST00000274254 RC3H1Q5TC82 1133 aaKnown RBP22.09■■□□□ 1.13
SKP2-201ENST00000274254 NBPF14Q5TI25 921 aa22.09■■□□□ 1.13
SKP2-201ENST00000274254 NBPF10Q6P3W6 841 aaKnown RBP22.09■■□□□ 1.13
SKP2-201ENST00000274254 NBPF15Q8N660 670 aa22.09■■□□□ 1.13
SKP2-201ENST00000274254 STK31Q9BXU1 1019 aa22.09■■□□□ 1.13
SKP2-201ENST00000274254 DDX21Q9NR30 783 aaKnown RBP eCLIP22.09■■□□□ 1.13
SKP2-201ENST00000274254 CCDC87Q9NVE4 849 aa22.09■■□□□ 1.13
SKP2-201ENST00000274254 CENPBP07199 599 aaPredicted RBP22.08■■□□□ 1.13
SKP2-201ENST00000274254 BRPF1P55201 1214 aaPredicted RBP22.08■■□□□ 1.13
SKP2-201ENST00000274254 LRP10Q7Z4F1 713 aa22.08■■□□□ 1.13
SKP2-201ENST00000274254 ZBTB1Q9Y2K1 713 aa22.08■■□□□ 1.13
SKP2-201ENST00000274254 PROSER3Q2NL68 480 aa22.07■■□□□ 1.12
SKP2-201ENST00000274254 BCL2L13Q9BXK5 485 aa22.07■■□□□ 1.12
SKP2-201ENST00000274254 SMC4Q9NTJ3 1288 aa22.07■■□□□ 1.12
SKP2-201ENST00000274254 SLC4A2P04920 1241 aa22.06■■□□□ 1.12
SKP2-201ENST00000274254 PIP4K2AP48426 406 aaPredicted RBP22.06■■□□□ 1.12
SKP2-201ENST00000274254 MRPL50Q8N5N7 158 aaKnown RBP22.06■■□□□ 1.12
SKP2-201ENST00000274254 BCAR3O75815 825 aa22.06■■□□□ 1.12
SKP2-201ENST00000274254 ANXA1P04083 346 aa22.06■■□□□ 1.12
SKP2-201ENST00000274254 HYPKQ9NX55 129 aa22.05■■□□□ 1.12
SKP2-201ENST00000274254 CANXP27824 592 aaKnown RBP22.04■■□□□ 1.12
SKP2-201ENST00000274254 NUP188Q5SRE5 1749 aa22.04■■□□□ 1.12
SKP2-201ENST00000274254 MYL6BP14649 208 aa22.03■■□□□ 1.12
SKP2-201ENST00000274254 IL6STP40189 918 aaPredicted RBP22.03■■□□□ 1.12
SKP2-201ENST00000274254 EIF5P55010 431 aaKnown RBP22.03■■□□□ 1.12
SKP2-201ENST00000274254 G2E3Q7L622 706 aa22.02■■□□□ 1.12
SKP2-201ENST00000274254 GNPATO15228 680 aa22.01■■□□□ 1.11
SKP2-201ENST00000274254 RPS6KA4O75676 772 aa22.01■■□□□ 1.11
SKP2-201ENST00000274254 AKT1S1Q96B36 256 aa22.01■■□□□ 1.11
SKP2-201ENST00000274254 AK7Q96M32 723 aa22.01■■□□□ 1.11
SKP2-201ENST00000274254 PHAXQ9H814 394 aaKnown RBP22.01■■□□□ 1.11
SKP2-201ENST00000274254 UBR3Q6ZT12 1888 aa22.01■■□□□ 1.11
SKP2-201ENST00000274254 FLIIQ13045 1269 aa22.01■■□□□ 1.11
SKP2-201ENST00000274254 KIF16BQ96L93 1317 aa22■■□□□ 1.11
SKP2-201ENST00000274254 ZNF827Q17R98 1081 aa22■■□□□ 1.11
SKP2-201ENST00000274254 AMIGO3Q86WK7 504 aa22■■□□□ 1.11
SKP2-201ENST00000274254 NOB1Q9ULX3 412 aaKnown RBP21.99■■□□□ 1.11
SKP2-201ENST00000274254 RTCBQ9Y3I0 505 aaKnown RBP21.99■■□□□ 1.11
SKP2-201ENST00000274254 COPS6Q7L5N1 327 aa21.98■■□□□ 1.11
SKP2-201ENST00000274254 XAGE3Q8WTP9 111 aa21.98■■□□□ 1.11
SKP2-201ENST00000274254 ANO8Q9HCE9 1232 aaPredicted RBP21.98■■□□□ 1.11
SKP2-201ENST00000274254 COL15A1P39059 1388 aa21.98■■□□□ 1.11
SKP2-201ENST00000274254 PTPRCP08575 1304 aa21.97■■□□□ 1.11
SKP2-201ENST00000274254 ARHGAP45Q92619 1136 aa21.96■■□□□ 1.11
SKP2-201ENST00000274254 ZNF330Q9Y3S2 320 aaPredicted RBP21.96■■□□□ 1.11
SKP2-201ENST00000274254 RNF123Q5XPI4 1314 aa21.96■■□□□ 1.11
SKP2-201ENST00000274254 ADRA2BP18089 450 aa21.96■■□□□ 1.11
SKP2-201ENST00000274254 SSFA2P28290 1259 aa21.96■■□□□ 1.11
SKP2-201ENST00000274254 AIMP1Q12904 312 aaKnown RBP21.96■■□□□ 1.11
SKP2-201ENST00000274254 TTLL7Q6ZT98 887 aa21.96■■□□□ 1.11
SKP2-201ENST00000274254 SMIM5Q71RC9 77 aa21.96■■□□□ 1.11
SKP2-201ENST00000274254 TUBGCP6Q96RT7 1819 aa21.95■■□□□ 1.1
SKP2-201ENST00000274254 IPO8O15397 1037 aaKnown RBP21.95■■□□□ 1.1
SKP2-201ENST00000274254 FKBP5Q13451 457 aaPredicted RBP21.95■■□□□ 1.1
SKP2-201ENST00000274254 SLC15A2Q16348 729 aa21.95■■□□□ 1.1
SKP2-201ENST00000274254 NPM2Q86SE8 214 aaKnown RBP21.95■■□□□ 1.1
SKP2-201ENST00000274254 FRAT1Q92837 279 aaPredicted RBP21.95■■□□□ 1.1
SKP2-201ENST00000274254 A0A087WZG4 1122 aa21.94■■□□□ 1.1
SKP2-201ENST00000274254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.94■■□□□ 1.1
SKP2-201ENST00000274254 STK32BQ9NY57 414 aa21.94■■□□□ 1.1
SKP2-201ENST00000274254 TFCP2L1Q9NZI6 479 aa21.94■■□□□ 1.1
SKP2-201ENST00000274254 DDX58O95786 925 aaKnown RBP21.93■■□□□ 1.1
SKP2-201ENST00000274254 TRAPPC3LQ5T215 181 aa21.93■■□□□ 1.1
SKP2-201ENST00000274254 ZKSCAN2Q63HK3 967 aa21.93■■□□□ 1.1
SKP2-201ENST00000274254 ATF7IPQ6VMQ6 1270 aa21.93■■□□□ 1.1
SKP2-201ENST00000274254 ANKRD13DQ6ZTN6 518 aa21.93■■□□□ 1.1
SKP2-201ENST00000274254 DZIP3Q86Y13 1208 aaKnown RBP21.93■■□□□ 1.1
SKP2-201ENST00000274254 ARHGEF1Q92888 912 aaKnown RBP21.93■■□□□ 1.1
SKP2-201ENST00000274254 SUPT16HQ9Y5B9 1047 aaKnown RBP21.93■■□□□ 1.1
SKP2-201ENST00000274254 C4AP0C0L4 1744 aa21.93■■□□□ 1.1
SKP2-201ENST00000274254 ADCY9O60503 1353 aa21.92■■□□□ 1.1
SKP2-201ENST00000274254 MAP3K15Q6ZN16 1313 aa21.92■■□□□ 1.1
SKP2-201ENST00000274254 PI4KAP2A4QPH2 592 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms