RNA–Protein interactions for RNA: ENST00000270221.10

EMP3-201, Transcript of epithelial membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EMP3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-201ENST00000270221 NEUROD2Q15784 382 aa13.12□□□□□ -0.31
EMP3-201ENST00000270221 NFE2L2Q16236 605 aa13.12□□□□□ -0.31
EMP3-201ENST00000270221 EMILIN1Q9Y6C2 1016 aa13.12□□□□□ -0.31
EMP3-201ENST00000270221 TOGARAM1Q9Y4F4 1720 aa13.11□□□□□ -0.31
EMP3-201ENST00000270221 PALLDQ8WX93 1383 aa13.11□□□□□ -0.31
EMP3-201ENST00000270221 PRKAR2BP31323 418 aa13.11□□□□□ -0.31
EMP3-201ENST00000270221 AMPHP49418 695 aa13.11□□□□□ -0.31
EMP3-201ENST00000270221 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
EMP3-201ENST00000270221 PDE3AQ14432 1141 aa13.11□□□□□ -0.31
EMP3-201ENST00000270221 ZCRB1Q8TBF4 217 aaKnown RBP13.11□□□□□ -0.31
EMP3-201ENST00000270221 CANXP27824 592 aaKnown RBP13.1□□□□□ -0.31
EMP3-201ENST00000270221 RRS1Q15050 365 aaKnown RBP13.1□□□□□ -0.31
EMP3-201ENST00000270221 UBR3Q6ZT12 1888 aa13.1□□□□□ -0.31
EMP3-201ENST00000270221 DCAF5Q96JK2 942 aa13.09□□□□□ -0.31
EMP3-201ENST00000270221 CNTNAP1P78357 1384 aa13.08□□□□□ -0.31
EMP3-201ENST00000270221 GNAI1P63096 354 aa13.08□□□□□ -0.32
EMP3-201ENST00000270221 CCDC87Q9NVE4 849 aa13.08□□□□□ -0.32
EMP3-201ENST00000270221 PIM2Q9P1W9 311 aa13.08□□□□□ -0.32
EMP3-201ENST00000270221 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
EMP3-201ENST00000270221 ARFGEF1Q9Y6D6 1849 aa13.08□□□□□ -0.32
EMP3-201ENST00000270221 ZC3H4Q9UPT8 1303 aaKnown RBP13.08□□□□□ -0.32
EMP3-201ENST00000270221 GLTPD2A6NH11 291 aa13.07□□□□□ -0.32
EMP3-201ENST00000270221 EIF4A2Q14240 407 aaKnown RBP13.07□□□□□ -0.32
EMP3-201ENST00000270221 DALRD3Q5D0E6 543 aaKnown RBP13.07□□□□□ -0.32
EMP3-201ENST00000270221 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
EMP3-201ENST00000270221 WBP1LQ9NX94 342 aa13.07□□□□□ -0.32
EMP3-201ENST00000270221 BRCA1P38398 1863 aaKnown RBP13.07□□□□□ -0.32
EMP3-201ENST00000270221 MAP3K19Q56UN5 1328 aa13.07□□□□□ -0.32
EMP3-201ENST00000270221 LTN1O94822 1766 aa13.07□□□□□ -0.32
EMP3-201ENST00000270221 HSPA8P11142 646 aaKnown RBP13.06□□□□□ -0.32
EMP3-201ENST00000270221 KCNA3P22001 575 aa13.06□□□□□ -0.32
EMP3-201ENST00000270221 GAS2L2Q8NHY3 880 aa13.06□□□□□ -0.32
EMP3-201ENST00000270221 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
EMP3-201ENST00000270221 IFT57Q9NWB7 429 aa13.06□□□□□ -0.32
EMP3-201ENST00000270221 IPO8O15397 1037 aaKnown RBP13.05□□□□□ -0.32
EMP3-201ENST00000270221 SULT6B1Q6IMI4 303 aa13.05□□□□□ -0.32
EMP3-201ENST00000270221 MPRIPQ6WCQ1 1025 aa13.05□□□□□ -0.32
EMP3-201ENST00000270221 SMARCC1Q92922 1105 aaPredicted RBP13.05□□□□□ -0.32
EMP3-201ENST00000270221 CFAP44Q96MT7 982 aa13.05□□□□□ -0.32
EMP3-201ENST00000270221 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
EMP3-201ENST00000270221 SBF1O95248 1867 aa13.04□□□□□ -0.32
EMP3-201ENST00000270221 GNPATO15228 680 aa13.04□□□□□ -0.32
EMP3-201ENST00000270221 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
EMP3-201ENST00000270221 HMOX1P09601 288 aa13.04□□□□□ -0.32
EMP3-201ENST00000270221 VEGFBP49765 207 aa13.04□□□□□ -0.32
EMP3-201ENST00000270221 ALDH1L2Q3SY69 923 aa13.04□□□□□ -0.32
EMP3-201ENST00000270221 NLGN1Q8N2Q7 840 aa13.04□□□□□ -0.32
EMP3-201ENST00000270221 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
EMP3-201ENST00000270221 FANCIQ9NVI1 1328 aa13.04□□□□□ -0.32
EMP3-201ENST00000270221 KDRP35968 1356 aa13.04□□□□□ -0.32
EMP3-201ENST00000270221 FAM208AQ9UK61 1670 aaKnown RBP13.03□□□□□ -0.32
EMP3-201ENST00000270221 RARSP54136 660 aaKnown RBP13.03□□□□□ -0.32
EMP3-201ENST00000270221 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
EMP3-201ENST00000270221 LINC00116Q8NCU8 138 aa13.03□□□□□ -0.32
EMP3-201ENST00000270221 RTF1Q92541 710 aaKnown RBP13.03□□□□□ -0.32
EMP3-201ENST00000270221 CHMP4AQ9BY43 222 aa13.03□□□□□ -0.32
EMP3-201ENST00000270221 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
EMP3-201ENST00000270221 MEGF6O75095 1541 aa13.03□□□□□ -0.32
EMP3-201ENST00000270221 HOXC9P31274 260 aa13.02□□□□□ -0.33
EMP3-201ENST00000270221 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.33
EMP3-201ENST00000270221 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
EMP3-201ENST00000270221 IP6K1Q92551 441 aa13.02□□□□□ -0.33
EMP3-201ENST00000270221 PARP3Q9Y6F1 533 aa13.02□□□□□ -0.33
EMP3-201ENST00000270221 POTECB2RU33 542 aa13.01□□□□□ -0.33
EMP3-201ENST00000270221 RASSF7Q02833 373 aa13.01□□□□□ -0.33
EMP3-201ENST00000270221 EXOC6Q8TAG9 804 aa13.01□□□□□ -0.33
EMP3-201ENST00000270221 SOS1Q07889 1333 aaPredicted RBP13□□□□□ -0.33
EMP3-201ENST00000270221 LMNB1P20700 586 aa13□□□□□ -0.33
EMP3-201ENST00000270221 FBLN1P23142 703 aa13□□□□□ -0.33
EMP3-201ENST00000270221 BRPF1P55201 1214 aaPredicted RBP13□□□□□ -0.33
EMP3-201ENST00000270221 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
EMP3-201ENST00000270221 BABAM1Q9NWV8 329 aa13□□□□□ -0.33
EMP3-201ENST00000270221 C4AP0C0L4 1744 aa12.99□□□□□ -0.33
EMP3-201ENST00000270221 KDM6AO15550 1401 aaPredicted RBP12.99□□□□□ -0.33
EMP3-201ENST00000270221 LOC102724428A0A0B4J2F2 783 aa12.99□□□□□ -0.33
EMP3-201ENST00000270221 SIK1P57059 783 aa12.99□□□□□ -0.33
EMP3-201ENST00000270221 CENPQQ7L2Z9 268 aaPredicted RBP12.99□□□□□ -0.33
EMP3-201ENST00000270221 FTSJ3Q8IY81 847 aaKnown RBP12.99□□□□□ -0.33
EMP3-201ENST00000270221 CRBNQ96SW2 442 aa12.99□□□□□ -0.33
EMP3-201ENST00000270221 PLIN1O60240 522 aa12.98□□□□□ -0.33
EMP3-201ENST00000270221 MAP2K1Q02750 393 aaPredicted RBP12.98□□□□□ -0.33
EMP3-201ENST00000270221 TRAPPC3LQ5T215 181 aa12.98□□□□□ -0.33
EMP3-201ENST00000270221 DPY19L2Q6NUT2 758 aa12.98□□□□□ -0.33
EMP3-201ENST00000270221 PHACTR3Q96KR7 559 aa12.98□□□□□ -0.33
EMP3-201ENST00000270221 SMC4Q9NTJ3 1288 aa12.98□□□□□ -0.33
EMP3-201ENST00000270221 PDE4DIPQ5VU43 2346 aa12.97□□□□□ -0.33
EMP3-201ENST00000270221 VIRMAQ69YN4 1812 aaKnown RBP12.97□□□□□ -0.33
EMP3-201ENST00000270221 BCAR3O75815 825 aa12.97□□□□□ -0.33
EMP3-201ENST00000270221 ZNF853P0CG23 659 aa12.97□□□□□ -0.33
EMP3-201ENST00000270221 EXOSC9Q06265 439 aaKnown RBP12.97□□□□□ -0.33
EMP3-201ENST00000270221 ARHGAP45Q92619 1136 aa12.97□□□□□ -0.33
EMP3-201ENST00000270221 PCDH11XQ9BZA7 1347 aa12.96□□□□□ -0.33
EMP3-201ENST00000270221 PCDH11YQ9BZA8 1340 aa12.96□□□□□ -0.33
EMP3-201ENST00000270221 TMEM88BA6NKF7 163 aa12.96□□□□□ -0.33
EMP3-201ENST00000270221 CHRNA5P30532 468 aa12.96□□□□□ -0.33
EMP3-201ENST00000270221 AMOTQ4VCS5 1084 aa12.96□□□□□ -0.33
EMP3-201ENST00000270221 RAPGEF4Q8WZA2 1011 aa12.96□□□□□ -0.33
EMP3-201ENST00000270221 EYA1Q99502 592 aa12.96□□□□□ -0.33
EMP3-201ENST00000270221 RTCBQ9Y3I0 505 aaKnown RBP12.96□□□□□ -0.33
EMP3-201ENST00000270221 PASKQ96RG2 1323 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms