RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 NWD2Q9ULI1 1742 aa25.78■■□□□ 1.72
LYSMD2-201ENST00000267838 UBR2Q8IWV8 1755 aa25.77■■□□□ 1.72
LYSMD2-201ENST00000267838 GLI3P10071 1580 aa25.77■■□□□ 1.72
LYSMD2-201ENST00000267838 CEP85Q6P2H3 762 aa25.77■■□□□ 1.72
LYSMD2-201ENST00000267838 DNAAF4Q8WXU2 420 aa25.77■■□□□ 1.72
LYSMD2-201ENST00000267838 PI4KAP2A4QPH2 592 aa25.76■■□□□ 1.71
LYSMD2-201ENST00000267838 NUCB1Q02818 461 aa25.76■■□□□ 1.71
LYSMD2-201ENST00000267838 PDIA6Q15084 440 aa25.76■■□□□ 1.71
LYSMD2-201ENST00000267838 PI4KAP1Q8N8J0 262 aa25.76■■□□□ 1.71
LYSMD2-201ENST00000267838 LAMB4A4D0S4 1761 aa25.76■■□□□ 1.71
LYSMD2-201ENST00000267838 ADCY9O60503 1353 aa25.76■■□□□ 1.71
LYSMD2-201ENST00000267838 GNAI3P08754 354 aa25.75■■□□□ 1.71
LYSMD2-201ENST00000267838 FAM161AQ3B820 660 aa25.74■■□□□ 1.71
LYSMD2-201ENST00000267838 SRCIN1Q9C0H9 1055 aa25.74■■□□□ 1.71
LYSMD2-201ENST00000267838 SPATA31A1Q5TZJ5 1347 aa25.74■■□□□ 1.71
LYSMD2-201ENST00000267838 SLIT2O94813 1529 aa25.74■■□□□ 1.71
LYSMD2-201ENST00000267838 JCADQ9P266 1359 aa25.74■■□□□ 1.71
LYSMD2-201ENST00000267838 GNAI2P04899 355 aa25.73■■□□□ 1.71
LYSMD2-201ENST00000267838 THRAP3Q9Y2W1 955 aaKnown RBP25.73■■□□□ 1.71
LYSMD2-201ENST00000267838 USP16Q9Y5T5 823 aa25.73■■□□□ 1.71
LYSMD2-201ENST00000267838 EXOC5O00471 708 aa25.72■■□□□ 1.71
LYSMD2-201ENST00000267838 CDCA7Q9BWT1 371 aaPredicted RBP25.72■■□□□ 1.71
LYSMD2-201ENST00000267838 KCPQ6ZWJ8 1503 aa25.72■■□□□ 1.71
LYSMD2-201ENST00000267838 BEND3Q5T5X7 828 aa25.72■■□□□ 1.71
LYSMD2-201ENST00000267838 KSR2Q6VAB6 950 aa25.72■■□□□ 1.71
LYSMD2-201ENST00000267838 CHD1LQ86WJ1 897 aa25.72■■□□□ 1.71
LYSMD2-201ENST00000267838 TMOD3Q9NYL9 352 aa25.72■■□□□ 1.71
LYSMD2-201ENST00000267838 C8orf34Q49A92 452 aa25.71■■□□□ 1.71
LYSMD2-201ENST00000267838 USP44Q9H0E7 712 aa25.71■■□□□ 1.71
LYSMD2-201ENST00000267838 TNS2Q63HR2 1409 aa25.71■■□□□ 1.71
LYSMD2-201ENST00000267838 DCTPP1Q9H773 170 aa25.7■■□□□ 1.7
LYSMD2-201ENST00000267838 MAP3K2Q9Y2U5 619 aa25.7■■□□□ 1.7
LYSMD2-201ENST00000267838 LRP6O75581 1613 aa25.7■■□□□ 1.7
LYSMD2-201ENST00000267838 DDX58O95786 925 aaKnown RBP25.69■■□□□ 1.7
LYSMD2-201ENST00000267838 ANKRD45Q5TZF3 282 aa25.69■■□□□ 1.7
LYSMD2-201ENST00000267838 BCL11AQ9H165 835 aa25.69■■□□□ 1.7
LYSMD2-201ENST00000267838 SPATA31A5Q5VU36 1347 aa25.69■■□□□ 1.7
LYSMD2-201ENST00000267838 SPATA31A7Q8IWB4 1347 aa25.69■■□□□ 1.7
LYSMD2-201ENST00000267838 ITGB4P16144 1822 aa25.69■■□□□ 1.7
LYSMD2-201ENST00000267838 MYL6BP14649 208 aa25.69■■□□□ 1.7
LYSMD2-201ENST00000267838 LNPKQ9C0E8 428 aa25.69■■□□□ 1.7
LYSMD2-201ENST00000267838 HMMRO75330 724 aa25.68■■□□□ 1.7
LYSMD2-201ENST00000267838 UBTFL1P0CB47 393 aaPredicted RBP25.67■■□□□ 1.7
LYSMD2-201ENST00000267838 AIMP1Q12904 312 aaKnown RBP25.67■■□□□ 1.7
LYSMD2-201ENST00000267838 LRP10Q7Z4F1 713 aa25.65■■□□□ 1.7
LYSMD2-201ENST00000267838 XAGE3Q8WTP9 111 aa25.65■■□□□ 1.7
LYSMD2-201ENST00000267838 PIGBQ92521 554 aa25.65■■□□□ 1.7
LYSMD2-201ENST00000267838 LRRFIP2Q9Y608 721 aaKnown RBP25.65■■□□□ 1.7
LYSMD2-201ENST00000267838 PTCD1O75127 700 aaKnown RBP25.64■■□□□ 1.7
LYSMD2-201ENST00000267838 ALDH1L1O75891 902 aa25.64■■□□□ 1.7
LYSMD2-201ENST00000267838 ERBB4Q15303 1308 aa25.64■■□□□ 1.7
LYSMD2-201ENST00000267838 CCDC9Q9Y3X0 531 aaKnown RBP25.64■■□□□ 1.7
LYSMD2-201ENST00000267838 COPS6Q7L5N1 327 aa25.64■■□□□ 1.69
LYSMD2-201ENST00000267838 UNC5CLQ8IV45 518 aa25.64■■□□□ 1.69
LYSMD2-201ENST00000267838 DDB1Q16531 1140 aa25.63■■□□□ 1.69
LYSMD2-201ENST00000267838 RTL5Q5HYW3 569 aaPredicted RBP25.63■■□□□ 1.69
LYSMD2-201ENST00000267838 BARGINQ6ZT62 677 aa25.63■■□□□ 1.69
LYSMD2-201ENST00000267838 DDRGK1Q96HY6 314 aa25.63■■□□□ 1.69
LYSMD2-201ENST00000267838 HSPA1LP34931 641 aa25.62■■□□□ 1.69
LYSMD2-201ENST00000267838 PIP4K2AP48426 406 aaPredicted RBP25.62■■□□□ 1.69
LYSMD2-201ENST00000267838 ATP8B2P98198 1209 aa25.62■■□□□ 1.69
LYSMD2-201ENST00000267838 RIC3Q7Z5B4 369 aa25.62■■□□□ 1.69
LYSMD2-201ENST00000267838 NPM2Q86SE8 214 aaKnown RBP25.62■■□□□ 1.69
LYSMD2-201ENST00000267838 C8orf37Q96NL8 207 aa25.62■■□□□ 1.69
LYSMD2-201ENST00000267838 SPATA31A6Q5VVP1 1343 aa25.62■■□□□ 1.69
LYSMD2-201ENST00000267838 NGLY1Q96IV0 654 aa25.61■■□□□ 1.69
LYSMD2-201ENST00000267838 BCL9O00512 1426 aa25.61■■□□□ 1.69
LYSMD2-201ENST00000267838 DEKP35659 375 aaKnown RBP25.61■■□□□ 1.69
LYSMD2-201ENST00000267838 NBR1Q14596 966 aa25.61■■□□□ 1.69
LYSMD2-201ENST00000267838 LINS1Q8NG48 757 aa25.61■■□□□ 1.69
LYSMD2-201ENST00000267838 NBPF7P0C2Y1 421 aaPredicted RBP25.6■■□□□ 1.69
LYSMD2-201ENST00000267838 ASAP1Q9ULH1 1129 aa25.6■■□□□ 1.69
LYSMD2-201ENST00000267838 DOT1LQ8TEK3 1739 aa25.6■■□□□ 1.69
LYSMD2-201ENST00000267838 ATG3Q9NT62 314 aa25.59■■□□□ 1.69
LYSMD2-201ENST00000267838 BCL9LQ86UU0 1499 aa25.59■■□□□ 1.69
LYSMD2-201ENST00000267838 CWF19L2Q2TBE0 894 aaKnown RBP25.59■■□□□ 1.69
LYSMD2-201ENST00000267838 ANKRD13DQ6ZTN6 518 aa25.59■■□□□ 1.69
LYSMD2-201ENST00000267838 PNMA6EA0A0J9YXQ4 647 aa25.58■■□□□ 1.69
LYSMD2-201ENST00000267838 NBPF26B4DH59 902 aa25.58■■□□□ 1.69
LYSMD2-201ENST00000267838 NBPF14Q5TI25 921 aa25.58■■□□□ 1.69
LYSMD2-201ENST00000267838 NBPF10Q6P3W6 841 aaKnown RBP25.58■■□□□ 1.69
LYSMD2-201ENST00000267838 NBPF15Q8N660 670 aa25.58■■□□□ 1.69
LYSMD2-201ENST00000267838 VSIG10Q8N0Z9 540 aa25.57■■□□□ 1.68
LYSMD2-201ENST00000267838 METTL22Q9BUU2 404 aaPredicted RBP25.57■■□□□ 1.68
LYSMD2-201ENST00000267838 C9orf78Q9NZ63 289 aaPredicted RBP25.57■■□□□ 1.68
LYSMD2-201ENST00000267838 NEXNQ0ZGT2 675 aa25.56■■□□□ 1.68
LYSMD2-201ENST00000267838 VPS72Q15906 364 aa25.56■■□□□ 1.68
LYSMD2-201ENST00000267838 ARFGEF2Q9Y6D5 1785 aa25.56■■□□□ 1.68
LYSMD2-201ENST00000267838 FNBP4Q8N3X1 1017 aaPredicted RBP25.56■■□□□ 1.68
LYSMD2-201ENST00000267838 IBTKQ9P2D0 1353 aaPredicted RBP25.56■■□□□ 1.68
LYSMD2-201ENST00000267838 A1BGP04217 495 aa25.55■■□□□ 1.68
LYSMD2-201ENST00000267838 SYTL4Q96C24 671 aaPredicted RBP25.55■■□□□ 1.68
LYSMD2-201ENST00000267838 TEX13AQ9BXU3 409 aaPredicted RBP25.55■■□□□ 1.68
LYSMD2-201ENST00000267838 IGKV5-2P06315 115 aa25.54■■□□□ 1.68
LYSMD2-201ENST00000267838 MARCH10Q8NA82 808 aaPredicted RBP25.54■■□□□ 1.68
LYSMD2-201ENST00000267838 HDAC5Q9UQL6 1122 aa25.54■■□□□ 1.68
LYSMD2-201ENST00000267838 KAT6BQ8WYB5 2073 aa25.54■■□□□ 1.68
LYSMD2-201ENST00000267838 PRIM1P49642 420 aaKnown RBP25.54■■□□□ 1.68
LYSMD2-201ENST00000267838 SSH3Q8TE77 659 aa25.54■■□□□ 1.68
LYSMD2-201ENST00000267838 MYD88Q99836 296 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms