RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ZFYVE9O95405 1425 aa23.67■■□□□ 1.38
CSPG5-201ENST00000264723 UQCRHLA0A096LP55 91 aa23.66■■□□□ 1.38
CSPG5-201ENST00000264723 UQCRHP07919 91 aa23.66■■□□□ 1.38
CSPG5-201ENST00000264723 ATP8B2P98198 1209 aa23.66■■□□□ 1.38
CSPG5-201ENST00000264723 KIF3AQ9Y496 699 aa23.66■■□□□ 1.38
CSPG5-201ENST00000264723 TFIP11Q9UBB9 837 aaKnown RBP23.66■■□□□ 1.38
CSPG5-201ENST00000264723 GOLGA6L6A8MZA4 724 aa23.66■■□□□ 1.38
CSPG5-201ENST00000264723 LGR6Q9HBX8 967 aa23.65■■□□□ 1.38
CSPG5-201ENST00000264723 PALD1Q9ULE6 856 aa23.65■■□□□ 1.38
CSPG5-201ENST00000264723 BECN2A8MW95 431 aa23.65■■□□□ 1.38
CSPG5-201ENST00000264723 CHMLP26374 656 aa23.65■■□□□ 1.38
CSPG5-201ENST00000264723 LARP1Q6PKG0 1096 aaKnown RBP23.65■■□□□ 1.38
CSPG5-201ENST00000264723 VPS37DQ86XT2 251 aa23.65■■□□□ 1.38
CSPG5-201ENST00000264723 CNPY2Q9Y2B0 182 aa23.65■■□□□ 1.38
CSPG5-201ENST00000264723 STK11IPQ8N1F8 1099 aa23.64■■□□□ 1.38
CSPG5-201ENST00000264723 A0A087WZG4 1122 aa23.64■■□□□ 1.38
CSPG5-201ENST00000264723 HCLS1P14317 486 aaPredicted RBP23.64■■□□□ 1.38
CSPG5-201ENST00000264723 KIF6Q6ZMV9 814 aa23.64■■□□□ 1.38
CSPG5-201ENST00000264723 UBE3BQ7Z3V4 1068 aa23.64■■□□□ 1.38
CSPG5-201ENST00000264723 GOLGA6L19H0YKK7 550 aa23.64■■□□□ 1.37
CSPG5-201ENST00000264723 PIP4K2BP78356 416 aa23.64■■□□□ 1.37
CSPG5-201ENST00000264723 FSD2A1L4K1 749 aa23.63■■□□□ 1.37
CSPG5-201ENST00000264723 ADAMTS2O95450 1211 aa23.63■■□□□ 1.37
CSPG5-201ENST00000264723 TRDNQ13061 729 aa23.63■■□□□ 1.37
CSPG5-201ENST00000264723 USP48Q86UV5 1035 aa23.63■■□□□ 1.37
CSPG5-201ENST00000264723 CNNM1Q9NRU3 951 aa23.63■■□□□ 1.37
CSPG5-201ENST00000264723 LRRFIP1Q32MZ4 808 aaKnown RBP23.63■■□□□ 1.37
CSPG5-201ENST00000264723 CWF19L2Q2TBE0 894 aaKnown RBP23.62■■□□□ 1.37
CSPG5-201ENST00000264723 GIMAP6Q6P9H5 292 aa23.62■■□□□ 1.37
CSPG5-201ENST00000264723 NFATC2IPQ8NCF5 419 aa23.62■■□□□ 1.37
CSPG5-201ENST00000264723 ABCA6Q8N139 1617 aa23.62■■□□□ 1.37
CSPG5-201ENST00000264723 TSPOAP1O95153 1857 aa23.62■■□□□ 1.37
CSPG5-201ENST00000264723 GLRX3O76003 335 aaKnown RBP23.62■■□□□ 1.37
CSPG5-201ENST00000264723 CCDC57Q2TAC2 916 aa23.62■■□□□ 1.37
CSPG5-201ENST00000264723 PRR36Q9H6K5 1346 aa23.62■■□□□ 1.37
CSPG5-201ENST00000264723 RAB11FIP3O75154 756 aa23.62■■□□□ 1.37
CSPG5-201ENST00000264723 TRIM5Q9C035 493 aa23.62■■□□□ 1.37
CSPG5-201ENST00000264723 TPM2P07951 284 aa23.61■■□□□ 1.37
CSPG5-201ENST00000264723 BLOC1S2Q6QNY1 142 aa23.61■■□□□ 1.37
CSPG5-201ENST00000264723 RALYLQ86SE5 291 aaKnown RBP23.61■■□□□ 1.37
CSPG5-201ENST00000264723 LMBRD1Q9NUN5 540 aa23.61■■□□□ 1.37
CSPG5-201ENST00000264723 TET3O43151 1660 aa23.61■■□□□ 1.37
CSPG5-201ENST00000264723 COPS6Q7L5N1 327 aa23.61■■□□□ 1.37
CSPG5-201ENST00000264723 CKAP2LQ8IYA6 745 aa23.61■■□□□ 1.37
CSPG5-201ENST00000264723 LIMCH1Q9UPQ0 1083 aa23.61■■□□□ 1.37
CSPG5-201ENST00000264723 SPHKAPQ2M3C7 1700 aa23.6■■□□□ 1.37
CSPG5-201ENST00000264723 PLEKHG3A1L390 1219 aa23.6■■□□□ 1.37
CSPG5-201ENST00000264723 PSMA5P28066 241 aa23.6■■□□□ 1.37
CSPG5-201ENST00000264723 SASS6Q6UVJ0 657 aa23.6■■□□□ 1.37
CSPG5-201ENST00000264723 IFNL2Q8IZJ0 200 aa23.6■■□□□ 1.37
CSPG5-201ENST00000264723 RTL1A6NKG5 1358 aa23.6■■□□□ 1.37
CSPG5-201ENST00000264723 NCBP3Q53F19 620 aaKnown RBP23.6■■□□□ 1.37
CSPG5-201ENST00000264723 KIF1BO60333 1816 aa23.6■■□□□ 1.37
CSPG5-201ENST00000264723 NBPF7P0C2Y1 421 aaPredicted RBP23.59■■□□□ 1.37
CSPG5-201ENST00000264723 UNC5CLQ8IV45 518 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 CEP126Q9P2H0 1117 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 PIK3R4Q99570 1358 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 ZNF853P0CG23 659 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 NBPF6Q5VWK0 638 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 LRSAM1Q6UWE0 723 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 NFXL1Q6ZNB6 911 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 CADPS2Q86UW7 1296 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 NBPF4Q96M43 638 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 XAGE3Q8WTP9 111 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 FMNL2Q96PY5 1086 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 HYPKQ9NX55 129 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 EFCAB6Q5THR3 1501 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 STX6O43752 255 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 GJB2P29033 226 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 TMEM63CQ9P1W3 806 aa23.59■■□□□ 1.37
CSPG5-201ENST00000264723 GPTP24298 496 aa23.58■■□□□ 1.37
CSPG5-201ENST00000264723 CREBRFQ8IUR6 639 aa23.58■■□□□ 1.36
CSPG5-201ENST00000264723 ROBO2Q9HCK4 1378 aa23.57■■□□□ 1.36
CSPG5-201ENST00000264723 KIF2CQ99661 725 aa23.57■■□□□ 1.36
CSPG5-201ENST00000264723 GADD45BO75293 160 aaPredicted RBP23.57■■□□□ 1.36
CSPG5-201ENST00000264723 IP6K1Q92551 441 aa23.57■■□□□ 1.36
CSPG5-201ENST00000264723 ABCC3O15438 1527 aa23.56■■□□□ 1.36
CSPG5-201ENST00000264723 TTC12Q9H892 705 aaPredicted RBP23.56■■□□□ 1.36
CSPG5-201ENST00000264723 RNF17Q9BXT8 1623 aaKnown RBP23.56■■□□□ 1.36
CSPG5-201ENST00000264723 NRDCO43847 1150 aa23.56■■□□□ 1.36
CSPG5-201ENST00000264723 AK2P54819 239 aa23.56■■□□□ 1.36
CSPG5-201ENST00000264723 AKAP4Q5JQC9 854 aa23.56■■□□□ 1.36
CSPG5-201ENST00000264723 KRT85P78386 507 aa23.55■■□□□ 1.36
CSPG5-201ENST00000264723 TTC39AQ5SRH9 613 aa23.55■■□□□ 1.36
CSPG5-201ENST00000264723 FAM173BQ6P4H8 233 aa23.55■■□□□ 1.36
CSPG5-201ENST00000264723 CPLX2Q6PUV4 134 aaKnown RBP23.55■■□□□ 1.36
CSPG5-201ENST00000264723 C19orf44Q9H6X5 657 aa23.55■■□□□ 1.36
CSPG5-201ENST00000264723 ECHDC1Q9NTX5 307 aa23.55■■□□□ 1.36
CSPG5-201ENST00000264723 KCNQ3O43525 872 aa23.55■■□□□ 1.36
CSPG5-201ENST00000264723 LRRC2Q9BYS8 371 aa23.55■■□□□ 1.36
CSPG5-201ENST00000264723 TMOD3Q9NYL9 352 aa23.55■■□□□ 1.36
CSPG5-201ENST00000264723 HIP1O00291 1037 aa23.54■■□□□ 1.36
CSPG5-201ENST00000264723 DNM1Q05193 864 aaKnown RBP23.54■■□□□ 1.36
CSPG5-201ENST00000264723 CCDC158Q5M9N0 1113 aa23.54■■□□□ 1.36
CSPG5-201ENST00000264723 ANKRD13DQ6ZTN6 518 aa23.54■■□□□ 1.36
CSPG5-201ENST00000264723 GUCY1B3Q02153 619 aa23.54■■□□□ 1.36
CSPG5-201ENST00000264723 SYNE3Q6ZMZ3 975 aa23.54■■□□□ 1.36
CSPG5-201ENST00000264723 KLHDC4Q8TBB5 520 aa23.54■■□□□ 1.36
CSPG5-201ENST00000264723 TNMDQ9H2S6 317 aa23.54■■□□□ 1.36
CSPG5-201ENST00000264723 RRP12Q5JTH9 1297 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms