RNA–Protein interactions for RNA: ENST00000264637.8

THRA-201, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene THRA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-201ENST00000264637 SSH3Q8TE77 659 aa27.54■■■□□ 2
THRA-201ENST00000264637 LTV1Q96GA3 475 aaPredicted RBP27.54■■■□□ 2
THRA-201ENST00000264637 MPNDQ8N594 471 aa27.54■■■□□ 2
THRA-201ENST00000264637 TCHHQ07283 1943 aa27.53■■■□□ 2
THRA-201ENST00000264637 PI4K2BQ8TCG2 481 aa27.52■■■□□ 2
THRA-201ENST00000264637 HTATSF1O43719 755 aaKnown RBP27.52■■■□□ 2
THRA-201ENST00000264637 DTNBO60941 627 aa27.52■■■□□ 2
THRA-201ENST00000264637 RPAP1Q9BWH6 1393 aaPredicted RBP27.52■■■□□ 2
THRA-201ENST00000264637 WDR33Q9C0J8 1336 aaKnown RBP27.52■■■□□ 2
THRA-201ENST00000264637 TERF1P54274 439 aa27.51■■■□□ 2
THRA-201ENST00000264637 UBR1Q8IWV7 1749 aa27.51■■■□□ 2
THRA-201ENST00000264637 NLRP6P59044 892 aa27.51■■□□□ 1.99
THRA-201ENST00000264637 HDGFL1Q5TGJ6 251 aa27.51■■□□□ 1.99
THRA-201ENST00000264637 SYAP1Q96A49 352 aaPredicted RBP27.51■■□□□ 1.99
THRA-201ENST00000264637 TAF7Q15545 349 aaPredicted RBP27.5■■□□□ 1.99
THRA-201ENST00000264637 RASEFQ8IZ41 740 aa27.5■■□□□ 1.99
THRA-201ENST00000264637 RHPN1Q8TCX5 695 aa27.5■■□□□ 1.99
THRA-201ENST00000264637 SNX14Q9Y5W7 946 aa27.5■■□□□ 1.99
THRA-201ENST00000264637 AOX1Q06278 1338 aa27.5■■□□□ 1.99
THRA-201ENST00000264637 FAM13BQ9NYF5 915 aa27.5■■□□□ 1.99
THRA-201ENST00000264637 CNPY2Q9Y2B0 182 aa27.5■■□□□ 1.99
THRA-201ENST00000264637 AMOTL2Q9Y2J4 779 aa27.5■■□□□ 1.99
THRA-201ENST00000264637 USHBP1Q8N6Y0 703 aa27.49■■□□□ 1.99
THRA-201ENST00000264637 UQCRHLA0A096LP55 91 aa27.49■■□□□ 1.99
THRA-201ENST00000264637 ZBTB7CA1YPR0 619 aa27.49■■□□□ 1.99
THRA-201ENST00000264637 SGSM2O43147 1006 aa27.49■■□□□ 1.99
THRA-201ENST00000264637 PTMAP06454 111 aaKnown RBP27.49■■□□□ 1.99
THRA-201ENST00000264637 UQCRHP07919 91 aa27.49■■□□□ 1.99
THRA-201ENST00000264637 MCM5P33992 734 aa27.49■■□□□ 1.99
THRA-201ENST00000264637 LRRC37A3O60309 1634 aa27.49■■□□□ 1.99
THRA-201ENST00000264637 SRGAP3O43295 1099 aa27.48■■□□□ 1.99
THRA-201ENST00000264637 NBPF7P0C2Y1 421 aaPredicted RBP27.48■■□□□ 1.99
THRA-201ENST00000264637 EIF2S2P20042 333 aaKnown RBP27.48■■□□□ 1.99
THRA-201ENST00000264637 HOXC9P31274 260 aa27.48■■□□□ 1.99
THRA-201ENST00000264637 MAP3K5Q99683 1374 aa27.48■■□□□ 1.99
THRA-201ENST00000264637 CPA1P15085 419 aa27.48■■□□□ 1.99
THRA-201ENST00000264637 RAD50Q92878 1312 aa27.48■■□□□ 1.99
THRA-201ENST00000264637 PLEKHG5O94827 1062 aa27.47■■□□□ 1.99
THRA-201ENST00000264637 AK2P54819 239 aa27.47■■□□□ 1.99
THRA-201ENST00000264637 POLA2Q14181 598 aa27.47■■□□□ 1.99
THRA-201ENST00000264637 SPG7Q9UQ90 795 aa27.47■■□□□ 1.99
THRA-201ENST00000264637 PLEKHG1Q9ULL1 1385 aa27.47■■□□□ 1.99
THRA-201ENST00000264637 CWC27Q6UX04 472 aaKnown RBP27.46■■□□□ 1.99
THRA-201ENST00000264637 TTC14Q96N46 770 aa27.46■■□□□ 1.99
THRA-201ENST00000264637 LSG1Q9H089 658 aaKnown RBP27.46■■□□□ 1.99
THRA-201ENST00000264637 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.46■■□□□ 1.993e-6■□□□□ 8.4
THRA-201ENST00000264637 RGPD8O14715 1765 aaPredicted RBP27.46■■□□□ 1.99
THRA-201ENST00000264637 RUFY3Q7L099 469 aa27.45■■□□□ 1.99
THRA-201ENST00000264637 RAB11FIP3O75154 756 aa27.45■■□□□ 1.98
THRA-201ENST00000264637 ZNF830Q96NB3 372 aaPredicted RBP27.44■■□□□ 1.98
THRA-201ENST00000264637 PIK3C2AO00443 1686 aa27.44■■□□□ 1.98
THRA-201ENST00000264637 CSPP1Q1MSJ5 1256 aa27.44■■□□□ 1.98
THRA-201ENST00000264637 PHF14O94880 888 aa27.43■■□□□ 1.98
THRA-201ENST00000264637 USP25Q9UHP3 1055 aa27.43■■□□□ 1.98
THRA-201ENST00000264637 ZSCAN22P10073 491 aaPredicted RBP27.43■■□□□ 1.98
THRA-201ENST00000264637 SYT1P21579 422 aa27.43■■□□□ 1.98
THRA-201ENST00000264637 PXDNLA1KZ92 1463 aa27.43■■□□□ 1.98
THRA-201ENST00000264637 NWD1Q149M9 1564 aa27.42■■□□□ 1.98
THRA-201ENST00000264637 LARGE1O95461 756 aa27.42■■□□□ 1.98
THRA-201ENST00000264637 ANXA1P04083 346 aa27.42■■□□□ 1.98
THRA-201ENST00000264637 CEBPAP49715 358 aaPredicted RBP27.42■■□□□ 1.98
THRA-201ENST00000264637 KIF1BPQ96EK5 621 aa27.42■■□□□ 1.98
THRA-201ENST00000264637 EPB41L2O43491 1005 aaKnown RBP27.41■■□□□ 1.98
THRA-201ENST00000264637 CACNA1FO60840 1977 aa27.41■■□□□ 1.98
THRA-201ENST00000264637 STX6O43752 255 aa27.41■■□□□ 1.98
THRA-201ENST00000264637 CNTROBQ8N137 903 aa27.41■■□□□ 1.98
THRA-201ENST00000264637 TMEM87AQ8NBN3 555 aa27.41■■□□□ 1.98
THRA-201ENST00000264637 CHPF2Q9P2E5 772 aa27.4■■□□□ 1.98
THRA-201ENST00000264637 HCLS1P14317 486 aaPredicted RBP27.4■■□□□ 1.98
THRA-201ENST00000264637 CCDC183Q5T5S1 534 aa27.4■■□□□ 1.98
THRA-201ENST00000264637 LIMCH1Q9UPQ0 1083 aa27.4■■□□□ 1.98
THRA-201ENST00000264637 PI4KAP2A4QPH2 592 aa27.39■■□□□ 1.98
THRA-201ENST00000264637 FIBPO43427 364 aa27.39■■□□□ 1.98
THRA-201ENST00000264637 PI4KAP1Q8N8J0 262 aa27.39■■□□□ 1.98
THRA-201ENST00000264637 CASTP20810 708 aaKnown RBP27.39■■□□□ 1.97
THRA-201ENST00000264637 KCNQ3O43525 872 aa27.38■■□□□ 1.97
THRA-201ENST00000264637 PLPPR3Q6T4P5 718 aa27.38■■□□□ 1.97
THRA-201ENST00000264637 LGR6Q9HBX8 967 aa27.38■■□□□ 1.97
THRA-201ENST00000264637 N4BP2Q86UW6 1770 aaPredicted RBP27.38■■□□□ 1.97
THRA-201ENST00000264637 KIAA2012Q0VF49 1180 aa27.38■■□□□ 1.97
THRA-201ENST00000264637 BEND3Q5T5X7 828 aa27.38■■□□□ 1.97
THRA-201ENST00000264637 SMC3Q9UQE7 1217 aa27.37■■□□□ 1.97
THRA-201ENST00000264637 PTH1RQ03431 593 aa27.37■■□□□ 1.97
THRA-201ENST00000264637 DDX54Q8TDD1 881 aaKnown RBP27.37■■□□□ 1.97
THRA-201ENST00000264637 F13A1P00488 732 aa27.36■■□□□ 1.97
THRA-201ENST00000264637 ADCK5Q3MIX3 580 aa27.36■■□□□ 1.97
THRA-201ENST00000264637 SASS6Q6UVJ0 657 aa27.36■■□□□ 1.97
THRA-201ENST00000264637 ADCY5O95622 1261 aa27.36■■□□□ 1.97
THRA-201ENST00000264637 CCDC83Q8IWF9 413 aa27.36■■□□□ 1.97
THRA-201ENST00000264637 ABTB2Q8N961 1025 aa27.36■■□□□ 1.97
THRA-201ENST00000264637 DNAAF4Q8WXU2 420 aa27.36■■□□□ 1.97
THRA-201ENST00000264637 BABAM1Q9NWV8 329 aa27.36■■□□□ 1.97
THRA-201ENST00000264637 DIP2AQ14689 1571 aa27.35■■□□□ 1.97
THRA-201ENST00000264637 EIF4A1P60842 406 aaKnown RBP27.35■■□□□ 1.97
THRA-201ENST00000264637 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.35■■□□□ 1.97
THRA-201ENST00000264637 UBE2HP62256 183 aa27.35■■□□□ 1.97
THRA-201ENST00000264637 OS9Q13438 667 aaPredicted RBP27.35■■□□□ 1.97
THRA-201ENST00000264637 C17orf53Q8N3J3 647 aaPredicted RBP27.35■■□□□ 1.97
THRA-201ENST00000264637 FAM184AQ8NB25 1140 aa27.35■■□□□ 1.97
THRA-201ENST00000264637 TTC12Q9H892 705 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms