RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 SNRPA1P09661 255 aaKnown RBP19.63■□□□□ 0.73
FOXRED1-201ENST00000263578 PI4KAP1Q8N8J0 262 aa19.63■□□□□ 0.73
FOXRED1-201ENST00000263578 SRCIN1Q9C0H9 1055 aa19.63■□□□□ 0.73
FOXRED1-201ENST00000263578 ANKRD45Q5TZF3 282 aa19.63■□□□□ 0.73
FOXRED1-201ENST00000263578 DCTPP1Q9H773 170 aa19.63■□□□□ 0.73
FOXRED1-201ENST00000263578 HMMRO75330 724 aa19.62■□□□□ 0.73
FOXRED1-201ENST00000263578 NWD2Q9ULI1 1742 aa19.61■□□□□ 0.73
FOXRED1-201ENST00000263578 PDIA6Q15084 440 aa19.61■□□□□ 0.73
FOXRED1-201ENST00000263578 KCPQ6ZWJ8 1503 aa19.6■□□□□ 0.73
FOXRED1-201ENST00000263578 ADAMTS2O95450 1211 aa19.6■□□□□ 0.73
FOXRED1-201ENST00000263578 BEND3Q5T5X7 828 aa19.6■□□□□ 0.73
FOXRED1-201ENST00000263578 USP44Q9H0E7 712 aa19.6■□□□□ 0.73
FOXRED1-201ENST00000263578 UBAP1LF5GYI3 381 aa19.59■□□□□ 0.73
FOXRED1-201ENST00000263578 UBTFL1P0CB47 393 aaPredicted RBP19.59■□□□□ 0.73
FOXRED1-201ENST00000263578 KSR2Q6VAB6 950 aa19.59■□□□□ 0.73
FOXRED1-201ENST00000263578 NPM2Q86SE8 214 aaKnown RBP19.59■□□□□ 0.73
FOXRED1-201ENST00000263578 TNS2Q63HR2 1409 aa19.59■□□□□ 0.73
FOXRED1-201ENST00000263578 DDX58O95786 925 aaKnown RBP19.59■□□□□ 0.73
FOXRED1-201ENST00000263578 LRP6O75581 1613 aa19.58■□□□□ 0.73
FOXRED1-201ENST00000263578 MAP3K2Q9Y2U5 619 aa19.58■□□□□ 0.73
FOXRED1-201ENST00000263578 ITGB4P16144 1822 aa19.58■□□□□ 0.72
FOXRED1-201ENST00000263578 USP16Q9Y5T5 823 aa19.57■□□□□ 0.72
FOXRED1-201ENST00000263578 LRRFIP2Q9Y608 721 aaKnown RBP19.57■□□□□ 0.72
FOXRED1-201ENST00000263578 ZBTB47Q9UFB7 747 aaPredicted RBP19.56■□□□□ 0.72
FOXRED1-201ENST00000263578 NUTM2BA6NNL0 878 aaPredicted RBP19.55■□□□□ 0.72
FOXRED1-201ENST00000263578 NUTM2EB1AL46 878 aaPredicted RBP19.55■□□□□ 0.72
FOXRED1-201ENST00000263578 ALDH1L1O75891 902 aa19.55■□□□□ 0.72
FOXRED1-201ENST00000263578 MYL6BP14649 208 aa19.55■□□□□ 0.72
FOXRED1-201ENST00000263578 NUTM2AQ8IVF1 878 aaPredicted RBP19.55■□□□□ 0.72
FOXRED1-201ENST00000263578 TMOD3Q9NYL9 352 aa19.55■□□□□ 0.72
FOXRED1-201ENST00000263578 ATP8B2P98198 1209 aa19.54■□□□□ 0.72
FOXRED1-201ENST00000263578 AIMP1Q12904 312 aaKnown RBP19.54■□□□□ 0.72
FOXRED1-201ENST00000263578 SLIT2O94813 1529 aa19.54■□□□□ 0.72
FOXRED1-201ENST00000263578 ERBB4Q15303 1308 aa19.54■□□□□ 0.72
FOXRED1-201ENST00000263578 SPATA31A1Q5TZJ5 1347 aa19.54■□□□□ 0.72
FOXRED1-201ENST00000263578 LRP10Q7Z4F1 713 aa19.53■□□□□ 0.72
FOXRED1-201ENST00000263578 XAGE3Q8WTP9 111 aa19.53■□□□□ 0.72
FOXRED1-201ENST00000263578 CDCA7Q9BWT1 371 aaPredicted RBP19.53■□□□□ 0.72
FOXRED1-201ENST00000263578 THRAP3Q9Y2W1 955 aaKnown RBP19.53■□□□□ 0.72
FOXRED1-201ENST00000263578 ARFGEF2Q9Y6D5 1785 aa19.53■□□□□ 0.72
FOXRED1-201ENST00000263578 PNMA6EA0A0J9YXQ4 647 aa19.52■□□□□ 0.72
FOXRED1-201ENST00000263578 EXOC5O00471 708 aa19.52■□□□□ 0.72
FOXRED1-201ENST00000263578 LINS1Q8NG48 757 aa19.52■□□□□ 0.72
FOXRED1-201ENST00000263578 IPO9Q96P70 1041 aaKnown RBP19.52■□□□□ 0.72
FOXRED1-201ENST00000263578 NBPF7P0C2Y1 421 aaPredicted RBP19.52■□□□□ 0.71
FOXRED1-201ENST00000263578 COPS6Q7L5N1 327 aa19.52■□□□□ 0.71
FOXRED1-201ENST00000263578 RIC3Q7Z5B4 369 aa19.52■□□□□ 0.71
FOXRED1-201ENST00000263578 MSH5O43196 834 aa19.51■□□□□ 0.71
FOXRED1-201ENST00000263578 BMP2KLQ5H9B9 411 aa19.51■□□□□ 0.71
FOXRED1-201ENST00000263578 IBTKQ9P2D0 1353 aaPredicted RBP19.51■□□□□ 0.71
FOXRED1-201ENST00000263578 DOT1LQ8TEK3 1739 aa19.51■□□□□ 0.71
FOXRED1-201ENST00000263578 JCADQ9P266 1359 aa19.5■□□□□ 0.71
FOXRED1-201ENST00000263578 PTCD1O75127 700 aaKnown RBP19.5■□□□□ 0.71
FOXRED1-201ENST00000263578 CWF19L2Q2TBE0 894 aaKnown RBP19.5■□□□□ 0.71
FOXRED1-201ENST00000263578 AFDNP55196 1824 aaKnown RBP19.49■□□□□ 0.71
FOXRED1-201ENST00000263578 APBB1O00213 710 aa19.49■□□□□ 0.71
FOXRED1-201ENST00000263578 PIP4K2AP48426 406 aaPredicted RBP19.49■□□□□ 0.71
FOXRED1-201ENST00000263578 NEXNQ0ZGT2 675 aa19.49■□□□□ 0.71
FOXRED1-201ENST00000263578 SSH3Q8TE77 659 aa19.49■□□□□ 0.71
FOXRED1-201ENST00000263578 PIGBQ92521 554 aa19.49■□□□□ 0.71
FOXRED1-201ENST00000263578 C9orf78Q9NZ63 289 aaPredicted RBP19.49■□□□□ 0.71
FOXRED1-201ENST00000263578 SPATA31A5Q5VU36 1347 aa19.49■□□□□ 0.71
FOXRED1-201ENST00000263578 SPATA31A7Q8IWB4 1347 aa19.49■□□□□ 0.71
FOXRED1-201ENST00000263578 SEC24BO95487 1268 aa19.48■□□□□ 0.71
FOXRED1-201ENST00000263578 PLEKHM2Q8IWE5 1019 aa19.48■□□□□ 0.71
FOXRED1-201ENST00000263578 HDAC5Q9UQL6 1122 aa19.48■□□□□ 0.71
FOXRED1-201ENST00000263578 EXOC6BQ9Y2D4 811 aa19.48■□□□□ 0.71
FOXRED1-201ENST00000263578 BCL9O00512 1426 aa19.48■□□□□ 0.71
FOXRED1-201ENST00000263578 ANKRD13DQ6ZTN6 518 aa19.48■□□□□ 0.71
FOXRED1-201ENST00000263578 NUP188Q5SRE5 1749 aa19.47■□□□□ 0.71
FOXRED1-201ENST00000263578 KAT6BQ8WYB5 2073 aa19.47■□□□□ 0.71
FOXRED1-201ENST00000263578 SMARCA5O60264 1052 aaPredicted RBP19.47■□□□□ 0.71
FOXRED1-201ENST00000263578 PPP1R42Q7Z4L9 355 aa19.47■□□□□ 0.71
FOXRED1-201ENST00000263578 METTL22Q9BUU2 404 aaPredicted RBP19.47■□□□□ 0.71
FOXRED1-201ENST00000263578 GRM8O00222 908 aa19.46■□□□□ 0.71
FOXRED1-201ENST00000263578 IGKV5-2P06315 115 aa19.46■□□□□ 0.71
FOXRED1-201ENST00000263578 POLA2Q14181 598 aa19.46■□□□□ 0.71
FOXRED1-201ENST00000263578 UPF2Q9HAU5 1272 aaKnown RBP19.46■□□□□ 0.71
FOXRED1-201ENST00000263578 UTYO14607 1347 aa19.46■□□□□ 0.71
FOXRED1-201ENST00000263578 NBPF26B4DH59 902 aa19.46■□□□□ 0.71
FOXRED1-201ENST00000263578 NBPF14Q5TI25 921 aa19.46■□□□□ 0.71
FOXRED1-201ENST00000263578 NBPF10Q6P3W6 841 aaKnown RBP19.46■□□□□ 0.71
FOXRED1-201ENST00000263578 NBPF15Q8N660 670 aa19.46■□□□□ 0.71
FOXRED1-201ENST00000263578 ASAP1Q9ULH1 1129 aa19.46■□□□□ 0.71
FOXRED1-201ENST00000263578 SRGAP3O43295 1099 aa19.45■□□□□ 0.7
FOXRED1-201ENST00000263578 DDB1Q16531 1140 aa19.45■□□□□ 0.7
FOXRED1-201ENST00000263578 C16orf71Q8IYS4 520 aaPredicted RBP19.45■□□□□ 0.7
FOXRED1-201ENST00000263578 VSIG10Q8N0Z9 540 aa19.45■□□□□ 0.7
FOXRED1-201ENST00000263578 DDRGK1Q96HY6 314 aa19.45■□□□□ 0.7
FOXRED1-201ENST00000263578 MYD88Q99836 296 aa19.45■□□□□ 0.7
FOXRED1-201ENST00000263578 LRRCC1Q9C099 1032 aa19.45■□□□□ 0.7
FOXRED1-201ENST00000263578 ATG3Q9NT62 314 aa19.45■□□□□ 0.7
FOXRED1-201ENST00000263578 NEURL1BA8MQ27 555 aa19.44■□□□□ 0.7
FOXRED1-201ENST00000263578 MTX1Q13505 466 aa19.44■□□□□ 0.7
FOXRED1-201ENST00000263578 BARGINQ6ZT62 677 aa19.44■□□□□ 0.7
FOXRED1-201ENST00000263578 PLBD2Q8NHP8 589 aa19.44■□□□□ 0.7
FOXRED1-201ENST00000263578 CCDC9Q9Y3X0 531 aaKnown RBP19.44■□□□□ 0.7
FOXRED1-201ENST00000263578 BCL11AQ9H165 835 aa19.44■□□□□ 0.7
FOXRED1-201ENST00000263578 A1BGP04217 495 aa19.43■□□□□ 0.7
FOXRED1-201ENST00000263578 TTC22Q5TAA0 569 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms