RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 SULT6B1Q6IMI4 303 aa17.93■□□□□ 0.46
XRCC1-201ENST00000262887 WAPLQ7Z5K2 1190 aa17.93■□□□□ 0.46
XRCC1-201ENST00000262887 VGLL3A8MV65 326 aa17.93■□□□□ 0.46
XRCC1-201ENST00000262887 SYT1P21579 422 aa17.93■□□□□ 0.46
XRCC1-201ENST00000262887 G2E3Q7L622 706 aa17.93■□□□□ 0.46
XRCC1-201ENST00000262887 F13A1P00488 732 aa17.92■□□□□ 0.46
XRCC1-201ENST00000262887 IL25Q9H293 177 aa17.92■□□□□ 0.46
XRCC1-201ENST00000262887 ALKQ9UM73 1620 aa17.92■□□□□ 0.46
XRCC1-201ENST00000262887 ZNF771Q7L3S4 317 aaPredicted RBP17.92■□□□□ 0.46
XRCC1-201ENST00000262887 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.92■□□□□ 0.46
XRCC1-201ENST00000262887 NCBP1Q09161 790 aaKnown RBP17.91■□□□□ 0.46
XRCC1-201ENST00000262887 STAP2Q9UGK3 403 aa17.91■□□□□ 0.46
XRCC1-201ENST00000262887 PNMA6EA0A0J9YXQ4 647 aa17.91■□□□□ 0.46
XRCC1-201ENST00000262887 EPB41L2O43491 1005 aaKnown RBP17.91■□□□□ 0.46
XRCC1-201ENST00000262887 SMC3Q9UQE7 1217 aa17.91■□□□□ 0.46
XRCC1-201ENST00000262887 TMEM131LA2VDJ0 1609 aa17.9■□□□□ 0.46
XRCC1-201ENST00000262887 SYCP1Q15431 976 aa17.9■□□□□ 0.46
XRCC1-201ENST00000262887 AK2P54819 239 aa17.9■□□□□ 0.46
XRCC1-201ENST00000262887 LARP6Q9BRS8 491 aaKnown RBP17.9■□□□□ 0.46
XRCC1-201ENST00000262887 CCDC192P0DO97 292 aa17.89■□□□□ 0.45
XRCC1-201ENST00000262887 MIS18AQ9NYP9 233 aa17.89■□□□□ 0.45
XRCC1-201ENST00000262887 PTGS1P23219 599 aa17.89■□□□□ 0.45
XRCC1-201ENST00000262887 LIMCH1Q9UPQ0 1083 aa17.89■□□□□ 0.45
XRCC1-201ENST00000262887 GNAI3P08754 354 aa17.88■□□□□ 0.45
XRCC1-201ENST00000262887 GABPB1Q06547 395 aaPredicted RBP17.88■□□□□ 0.45
XRCC1-201ENST00000262887 CTNNA3Q9UI47 895 aa17.88■□□□□ 0.45
XRCC1-201ENST00000262887 DNM1Q05193 864 aaKnown RBP17.88■□□□□ 0.45
XRCC1-201ENST00000262887 EIF4A2Q14240 407 aaKnown RBP17.88■□□□□ 0.45
XRCC1-201ENST00000262887 TTC14Q96N46 770 aa17.88■□□□□ 0.45
XRCC1-201ENST00000262887 SNX14Q9Y5W7 946 aa17.88■□□□□ 0.45
XRCC1-201ENST00000262887 RAD50Q92878 1312 aa17.88■□□□□ 0.45
XRCC1-201ENST00000262887 SMTNL1A8MU46 457 aa17.87■□□□□ 0.45
XRCC1-201ENST00000262887 ATP8B2P98198 1209 aa17.87■□□□□ 0.45
XRCC1-201ENST00000262887 PLCD3Q8N3E9 789 aa17.87■□□□□ 0.45
XRCC1-201ENST00000262887 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
XRCC1-201ENST00000262887 RUFY3Q7L099 469 aa17.87■□□□□ 0.45
XRCC1-201ENST00000262887 CGNQ9P2M7 1197 aaKnown RBP17.86■□□□□ 0.45
XRCC1-201ENST00000262887 AOX1Q06278 1338 aa17.86■□□□□ 0.45
XRCC1-201ENST00000262887 MAP4K4O95819 1239 aaPredicted RBP17.86■□□□□ 0.45
XRCC1-201ENST00000262887 IL1RAPL2Q9NP60 686 aa17.86■□□□□ 0.45
XRCC1-201ENST00000262887 TSPYL4Q9UJ04 414 aa17.86■□□□□ 0.45
XRCC1-201ENST00000262887 PAXIP1Q6ZW49 1069 aaPredicted RBP17.85■□□□□ 0.45
XRCC1-201ENST00000262887 FAM200AQ8TCP9 573 aa17.85■□□□□ 0.45
XRCC1-201ENST00000262887 DLC1Q96QB1 1528 aa17.85■□□□□ 0.45
XRCC1-201ENST00000262887 C16orf45Q96MC5 204 aaPredicted RBP17.85■□□□□ 0.45
XRCC1-201ENST00000262887 STK31Q9BXU1 1019 aa17.85■□□□□ 0.45
XRCC1-201ENST00000262887 CRB1P82279 1406 aa17.85■□□□□ 0.45
XRCC1-201ENST00000262887 SGSM2O43147 1006 aa17.85■□□□□ 0.45
XRCC1-201ENST00000262887 STAG3Q9UJ98 1225 aa17.85■□□□□ 0.45
XRCC1-201ENST00000262887 DDX41Q9UJV9 622 aaKnown RBP17.85■□□□□ 0.45
XRCC1-201ENST00000262887 CPS1P31327 1500 aa17.84■□□□□ 0.45
XRCC1-201ENST00000262887 GJB2P29033 226 aa17.84■□□□□ 0.45
XRCC1-201ENST00000262887 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
XRCC1-201ENST00000262887 RASEFQ8IZ41 740 aa17.84■□□□□ 0.45
XRCC1-201ENST00000262887 WASLO00401 505 aaPredicted RBP17.84■□□□□ 0.45
XRCC1-201ENST00000262887 CDK11BP21127 795 aaKnown RBP17.84■□□□□ 0.45
XRCC1-201ENST00000262887 CCDC186Q7Z3E2 898 aa17.84■□□□□ 0.45
XRCC1-201ENST00000262887 CCDC83Q8IWF9 413 aa17.84■□□□□ 0.45
XRCC1-201ENST00000262887 RTF1Q92541 710 aaKnown RBP17.84■□□□□ 0.45
XRCC1-201ENST00000262887 LRRFIP2Q9Y608 721 aaKnown RBP17.84■□□□□ 0.45
XRCC1-201ENST00000262887 TNNT1P13805 278 aa17.83■□□□□ 0.45
XRCC1-201ENST00000262887 MTMR6Q9Y217 621 aa17.83■□□□□ 0.45
XRCC1-201ENST00000262887 PAXBP1Q9Y5B6 917 aa17.83■□□□□ 0.45
XRCC1-201ENST00000262887 VPS37CA5D8V6 355 aaPredicted RBP17.82■□□□□ 0.44
XRCC1-201ENST00000262887 ZBTB22O15209 634 aa17.82■□□□□ 0.44
XRCC1-201ENST00000262887 LARGE1O95461 756 aa17.82■□□□□ 0.44
XRCC1-201ENST00000262887 CASTP20810 708 aaKnown RBP17.82■□□□□ 0.44
XRCC1-201ENST00000262887 DRC7Q8IY82 874 aa17.82■□□□□ 0.44
XRCC1-201ENST00000262887 NRKQ7Z2Y5 1582 aa17.82■□□□□ 0.44
XRCC1-201ENST00000262887 ARHGEF10O15013 1369 aa17.82■□□□□ 0.44
XRCC1-201ENST00000262887 PREX1Q8TCU6 1659 aa17.82■□□□□ 0.44
XRCC1-201ENST00000262887 NCKAP5LQ9HCH0 1330 aa17.82■□□□□ 0.44
XRCC1-201ENST00000262887 FLIIQ13045 1269 aa17.82■□□□□ 0.44
XRCC1-201ENST00000262887 CCDC112Q8NEF3 446 aa17.82■□□□□ 0.44
XRCC1-201ENST00000262887 LSG1Q9H089 658 aaKnown RBP17.82■□□□□ 0.44
XRCC1-201ENST00000262887 MORC2Q9Y6X9 1032 aaPredicted RBP17.82■□□□□ 0.44
XRCC1-201ENST00000262887 DTNBO60941 627 aa17.81■□□□□ 0.44
XRCC1-201ENST00000262887 SLFN14P0C7P3 912 aa17.81■□□□□ 0.44
XRCC1-201ENST00000262887 CPA1P15085 419 aa17.81■□□□□ 0.44
XRCC1-201ENST00000262887 LRMPQ12912 555 aa17.81■□□□□ 0.44
XRCC1-201ENST00000262887 MAP3K11Q16584 847 aa17.81■□□□□ 0.44
XRCC1-201ENST00000262887 LUZP1Q86V48 1076 aa17.81■□□□□ 0.44
XRCC1-201ENST00000262887 CHMP3Q9Y3E7 222 aa17.81■□□□□ 0.44
XRCC1-201ENST00000262887 MRVI1Q9Y6F6 885 aa17.81■□□□□ 0.44
XRCC1-201ENST00000262887 SOS1Q07889 1333 aaPredicted RBP17.81■□□□□ 0.44
XRCC1-201ENST00000262887 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
XRCC1-201ENST00000262887 NUP62CLQ9H1M0 184 aa17.81■□□□□ 0.44
XRCC1-201ENST00000262887 TYRO3Q06418 890 aa17.8■□□□□ 0.44
XRCC1-201ENST00000262887 CAMK4Q16566 473 aa17.8■□□□□ 0.44
XRCC1-201ENST00000262887 AEBP2Q6ZN18 517 aaPredicted RBP17.8■□□□□ 0.44
XRCC1-201ENST00000262887 HYPKQ9NX55 129 aa17.8■□□□□ 0.44
XRCC1-201ENST00000262887 DIP2CQ9Y2E4 1556 aa17.8■□□□□ 0.44
XRCC1-201ENST00000262887 NAA30Q147X3 362 aaPredicted RBP17.8■□□□□ 0.44
XRCC1-201ENST00000262887 ZSCAN25Q6NSZ9 544 aa17.8■□□□□ 0.44
XRCC1-201ENST00000262887 CNTROBQ8N137 903 aa17.8■□□□□ 0.44
XRCC1-201ENST00000262887 KIF18AQ8NI77 898 aa17.8■□□□□ 0.44
XRCC1-201ENST00000262887 CWC27Q6UX04 472 aaKnown RBP17.79■□□□□ 0.44
XRCC1-201ENST00000262887 PI4K2BQ8TCG2 481 aa17.79■□□□□ 0.44
XRCC1-201ENST00000262887 SPG7Q9UQ90 795 aa17.79■□□□□ 0.44
XRCC1-201ENST00000262887 NRBP1Q9UHY1 535 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms