RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 RIPK4P57078 832 aa27.99■■■□□ 2.07
CCNE1-201ENST00000262643 HNRNPUQ00839 825 aaKnown RBP eCLIP27.99■■■□□ 2.07
CCNE1-201ENST00000262643 SYT17Q9BSW7 474 aa27.99■■■□□ 2.07
CCNE1-201ENST00000262643 RFC4P35249 363 aa27.98■■■□□ 2.07
CCNE1-201ENST00000262643 MIS18AQ9NYP9 233 aa27.98■■■□□ 2.07
CCNE1-201ENST00000262643 RRP7AQ9Y3A4 280 aaKnown RBP27.98■■■□□ 2.07
CCNE1-201ENST00000262643 TAF7Q15545 349 aaPredicted RBP27.97■■■□□ 2.07
CCNE1-201ENST00000262643 TMPOP42166 694 aaKnown RBP27.97■■■□□ 2.07
CCNE1-201ENST00000262643 NEUROD2Q15784 382 aa27.97■■■□□ 2.07
CCNE1-201ENST00000262643 RUNDC1Q96C34 613 aa27.97■■■□□ 2.07
CCNE1-201ENST00000262643 ZBTB1Q9Y2K1 713 aa27.96■■■□□ 2.07
CCNE1-201ENST00000262643 STARD3NLO95772 234 aa27.95■■■□□ 2.06
CCNE1-201ENST00000262643 C4AP0C0L4 1744 aa27.95■■■□□ 2.06
CCNE1-201ENST00000262643 CANXP27824 592 aaKnown RBP27.93■■■□□ 2.06
CCNE1-201ENST00000262643 TEX13AQ9BXU3 409 aaPredicted RBP27.93■■■□□ 2.06
CCNE1-201ENST00000262643 SOS1Q07889 1333 aaPredicted RBP27.92■■■□□ 2.06
CCNE1-201ENST00000262643 SRP68Q9UHB9 627 aaKnown RBP27.92■■■□□ 2.06
CCNE1-201ENST00000262643 GYS1P13807 737 aa27.91■■■□□ 2.06
CCNE1-201ENST00000262643 GOLGB1Q14789 3259 aaKnown RBP27.9■■■□□ 2.06
CCNE1-201ENST00000262643 PRAMEF22A3QJZ6 481 aa27.9■■■□□ 2.06
CCNE1-201ENST00000262643 LMOD3Q0VAK6 560 aa27.9■■■□□ 2.06
CCNE1-201ENST00000262643 MMP10P09238 476 aa27.89■■■□□ 2.06
CCNE1-201ENST00000262643 NLGN1Q8N2Q7 840 aa27.89■■■□□ 2.06
CCNE1-201ENST00000262643 UTRNP46939 3433 aa27.89■■■□□ 2.06
CCNE1-201ENST00000262643 COL15A1P39059 1388 aa27.88■■■□□ 2.05
CCNE1-201ENST00000262643 USP42Q9H9J4 1324 aaKnown RBP27.88■■■□□ 2.05
CCNE1-201ENST00000262643 USP16Q9Y5T5 823 aa27.88■■■□□ 2.05
CCNE1-201ENST00000262643 SNRPA1P09661 255 aaKnown RBP27.87■■■□□ 2.05
CCNE1-201ENST00000262643 ZNF330Q9Y3S2 320 aaPredicted RBP27.87■■■□□ 2.05
CCNE1-201ENST00000262643 A1BGP04217 495 aa27.87■■■□□ 2.05
CCNE1-201ENST00000262643 ZPR1O75312 459 aa27.86■■■□□ 2.05
CCNE1-201ENST00000262643 NLGN2Q8NFZ4 835 aa27.86■■■□□ 2.05
CCNE1-201ENST00000262643 KDM3BQ7LBC6 1761 aa27.86■■■□□ 2.05
CCNE1-201ENST00000262643 DCAF8L1A6NGE4 600 aa27.85■■■□□ 2.05
CCNE1-201ENST00000262643 USPL1Q5W0Q7 1092 aa27.85■■■□□ 2.05
CCNE1-201ENST00000262643 FKBP8Q14318 412 aa27.84■■■□□ 2.05
CCNE1-201ENST00000262643 TRIM35Q9UPQ4 493 aa27.84■■■□□ 2.05
CCNE1-201ENST00000262643 PIP4K2AP48426 406 aaPredicted RBP27.84■■■□□ 2.05
CCNE1-201ENST00000262643 EIF5P55010 431 aaKnown RBP27.83■■■□□ 2.05
CCNE1-201ENST00000262643 TSPYL4Q9UJ04 414 aa27.83■■■□□ 2.05
CCNE1-201ENST00000262643 APAF1O14727 1248 aa27.82■■■□□ 2.04
CCNE1-201ENST00000262643 NARFQ9UHQ1 456 aa27.82■■■□□ 2.04
CCNE1-201ENST00000262643 EIF4A1P60842 406 aaKnown RBP27.81■■■□□ 2.04
CCNE1-201ENST00000262643 CD2APQ9Y5K6 639 aa27.8■■■□□ 2.04
CCNE1-201ENST00000262643 IL6STP40189 918 aaPredicted RBP27.8■■■□□ 2.04
CCNE1-201ENST00000262643 NPM2Q86SE8 214 aaKnown RBP27.8■■■□□ 2.04
CCNE1-201ENST00000262643 PARP3Q9Y6F1 533 aa27.79■■■□□ 2.04
CCNE1-201ENST00000262643 SENP3-EIF4A1A0A087X0R7 540 aa27.79■■■□□ 2.04
CCNE1-201ENST00000262643 LAS1LQ9Y4W2 734 aaKnown RBP27.79■■■□□ 2.04
CCNE1-201ENST00000262643 A0A087WZG4 1122 aa27.78■■■□□ 2.04
CCNE1-201ENST00000262643 GIGYF1O75420 1035 aaPredicted RBP27.78■■■□□ 2.04
CCNE1-201ENST00000262643 TBC1D2BQ9UPU7 963 aa27.78■■■□□ 2.04
CCNE1-201ENST00000262643 PELP1Q8IZL8 1130 aaKnown RBP27.77■■■□□ 2.04
CCNE1-201ENST00000262643 BCL2L12Q9HB09 334 aa27.75■■■□□ 2.03
CCNE1-201ENST00000262643 GTF3C3Q9Y5Q9 886 aa27.75■■■□□ 2.03
CCNE1-201ENST00000262643 DDR1Q08345 913 aa27.75■■■□□ 2.03
CCNE1-201ENST00000262643 GPR162Q16538 588 aa27.75■■■□□ 2.03
CCNE1-201ENST00000262643 LAMB4A4D0S4 1761 aa27.75■■■□□ 2.03
CCNE1-201ENST00000262643 BABAM1Q9NWV8 329 aa27.74■■■□□ 2.03
CCNE1-201ENST00000262643 NBPF26B4DH59 902 aa27.74■■■□□ 2.03
CCNE1-201ENST00000262643 NBPF10Q6P3W6 841 aaKnown RBP27.74■■■□□ 2.03
CCNE1-201ENST00000262643 NBPF15Q8N660 670 aa27.74■■■□□ 2.03
CCNE1-201ENST00000262643 ZBED9Q6R2W3 1325 aa27.73■■■□□ 2.03
CCNE1-201ENST00000262643 TM4SF1P30408 202 aa27.72■■■□□ 2.03
CCNE1-201ENST00000262643 DZIP3Q86Y13 1208 aaKnown RBP27.72■■■□□ 2.03
CCNE1-201ENST00000262643 NFIXQ14938 502 aa27.72■■■□□ 2.03
CCNE1-201ENST00000262643 CHL1O00533 1208 aa27.71■■■□□ 2.03
CCNE1-201ENST00000262643 BICDL1Q6ZP65 573 aa27.71■■■□□ 2.03
CCNE1-201ENST00000262643 WWC3Q9ULE0 1092 aa27.71■■■□□ 2.03
CCNE1-201ENST00000262643 POLRMTO00411 1230 aaKnown RBP27.7■■■□□ 2.03
CCNE1-201ENST00000262643 C10orf71Q711Q0 1435 aa27.69■■■□□ 2.02
CCNE1-201ENST00000262643 SCN7AQ01118 1682 aa27.69■■■□□ 2.02
CCNE1-201ENST00000262643 CAMTA2O94983 1202 aa27.68■■■□□ 2.02
CCNE1-201ENST00000262643 NGEFQ8N5V2 710 aa27.68■■■□□ 2.02
CCNE1-201ENST00000262643 KIF13BQ9NQT8 1826 aa27.67■■■□□ 2.02
CCNE1-201ENST00000262643 EIF2S2P20042 333 aaKnown RBP27.67■■■□□ 2.02
CCNE1-201ENST00000262643 KRT24Q2M2I5 525 aa27.67■■■□□ 2.02
CCNE1-201ENST00000262643 TBC1D9BQ66K14 1250 aa27.67■■■□□ 2.02
CCNE1-201ENST00000262643 MYL6BP14649 208 aa27.67■■■□□ 2.02
CCNE1-201ENST00000262643 CFAP44Q96MT7 982 aa27.67■■■□□ 2.02
CCNE1-201ENST00000262643 YBX3P16989 372 aaKnown RBP eCLIP27.65■■■□□ 2.02
CCNE1-201ENST00000262643 SERPINB2P05120 415 aa27.64■■■□□ 2.02
CCNE1-201ENST00000262643 PXDNLA1KZ92 1463 aa27.64■■■□□ 2.01
CCNE1-201ENST00000262643 A0A0G2JLW4 131 aa27.63■■■□□ 2.01
CCNE1-201ENST00000262643 CALD1Q05682 793 aaKnown RBP27.63■■■□□ 2.01
CCNE1-201ENST00000262643 NECTIN2Q92692 538 aa27.63■■■□□ 2.01
CCNE1-201ENST00000262643 MBIPQ9NS73 344 aa27.63■■■□□ 2.01
CCNE1-201ENST00000262643 BCORQ6W2J9 1755 aa27.63■■■□□ 2.01
CCNE1-201ENST00000262643 N4BP2Q86UW6 1770 aaPredicted RBP27.63■■■□□ 2.01
CCNE1-201ENST00000262643 AFDNP55196 1824 aaKnown RBP27.63■■■□□ 2.01
CCNE1-201ENST00000262643 TGFB2P61812 414 aa27.63■■■□□ 2.01
CCNE1-201ENST00000262643 IFT57Q9NWB7 429 aa27.62■■■□□ 2.01
CCNE1-201ENST00000262643 SALL2Q9Y467 1007 aaPredicted RBP27.62■■■□□ 2.01
CCNE1-201ENST00000262643 ZNF853P0CG23 659 aa27.6■■■□□ 2.01
CCNE1-201ENST00000262643 DPEP1P16444 411 aa27.6■■■□□ 2.01
CCNE1-201ENST00000262643 GNAI1P63096 354 aa27.6■■■□□ 2.01
CCNE1-201ENST00000262643 KIAA1551Q9HCM1 1747 aa27.6■■■□□ 2.01
CCNE1-201ENST00000262643 SETDB2Q96T68 719 aa27.6■■■□□ 2.01
CCNE1-201ENST00000262643 ZNF652Q9Y2D9 606 aa27.6■■■□□ 2.01
CCNE1-201ENST00000262643 ERBB4Q15303 1308 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms