RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 IFT57Q9NWB7 429 aa24.41■■□□□ 1.5
CYSTM1-201ENST00000261811 EIF4A1P60842 406 aaKnown RBP24.4■■□□□ 1.5
CYSTM1-201ENST00000261811 TRAPPC3LQ5T215 181 aa24.4■■□□□ 1.5
CYSTM1-201ENST00000261811 WWC1Q8IX03 1113 aa24.4■■□□□ 1.5
CYSTM1-201ENST00000261811 PHF14O94880 888 aa24.39■■□□□ 1.5
CYSTM1-201ENST00000261811 SALL2Q9Y467 1007 aaPredicted RBP24.39■■□□□ 1.5
CYSTM1-201ENST00000261811 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.38■■□□□ 1.49
CYSTM1-201ENST00000261811 SRCAPQ6ZRS2 3230 aa24.38■■□□□ 1.49
CYSTM1-201ENST00000261811 WDR63Q8IWG1 891 aa24.37■■□□□ 1.49
CYSTM1-201ENST00000261811 MTFR1LQ9H019 292 aa24.37■■□□□ 1.49
CYSTM1-201ENST00000261811 SPON1Q9HCB6 807 aa24.37■■□□□ 1.49
CYSTM1-201ENST00000261811 IL16Q14005 1332 aa24.37■■□□□ 1.49
CYSTM1-201ENST00000261811 COL23A1Q86Y22 540 aaPredicted RBP24.36■■□□□ 1.49
CYSTM1-201ENST00000261811 C4AP0C0L4 1744 aa24.36■■□□□ 1.49
CYSTM1-201ENST00000261811 LRP5O75197 1615 aa24.36■■□□□ 1.49
CYSTM1-201ENST00000261811 SENP3-EIF4A1A0A087X0R7 540 aa24.35■■□□□ 1.49
CYSTM1-201ENST00000261811 GIGYF1O75420 1035 aaPredicted RBP24.35■■□□□ 1.49
CYSTM1-201ENST00000261811 RFC4P35249 363 aa24.35■■□□□ 1.49
CYSTM1-201ENST00000261811 INTS5Q6P9B9 1019 aaKnown RBP24.35■■□□□ 1.49
CYSTM1-201ENST00000261811 CANXP27824 592 aaKnown RBP24.35■■□□□ 1.49
CYSTM1-201ENST00000261811 USP16Q9Y5T5 823 aa24.35■■□□□ 1.49
CYSTM1-201ENST00000261811 A0A087WZG4 1122 aa24.34■■□□□ 1.49
CYSTM1-201ENST00000261811 ZBTB7AO95365 584 aa24.34■■□□□ 1.49
CYSTM1-201ENST00000261811 ZNF853P0CG23 659 aa24.34■■□□□ 1.49
CYSTM1-201ENST00000261811 CHMP4AQ9BY43 222 aa24.34■■□□□ 1.49
CYSTM1-201ENST00000261811 PDGFDQ9GZP0 370 aaPredicted RBP24.33■■□□□ 1.48
CYSTM1-201ENST00000261811 MBIPQ9NS73 344 aa24.33■■□□□ 1.48
CYSTM1-201ENST00000261811 ZBTB1Q9Y2K1 713 aa24.33■■□□□ 1.48
CYSTM1-201ENST00000261811 COL24A1Q17RW2 1714 aa24.32■■□□□ 1.48
CYSTM1-201ENST00000261811 IL6STP40189 918 aaPredicted RBP24.32■■□□□ 1.48
CYSTM1-201ENST00000261811 ARHGEF1Q92888 912 aaKnown RBP24.32■■□□□ 1.48
CYSTM1-201ENST00000261811 POLD1P28340 1107 aa24.31■■□□□ 1.48
CYSTM1-201ENST00000261811 ATF5Q9Y2D1 282 aaPredicted RBP24.31■■□□□ 1.48
CYSTM1-201ENST00000261811 SOS1Q07889 1333 aaPredicted RBP24.31■■□□□ 1.48
CYSTM1-201ENST00000261811 PRAMEF22A3QJZ6 481 aa24.3■■□□□ 1.48
CYSTM1-201ENST00000261811 ZPR1O75312 459 aa24.3■■□□□ 1.48
CYSTM1-201ENST00000261811 A1BGP04217 495 aa24.3■■□□□ 1.48
CYSTM1-201ENST00000261811 HOXB7P09629 217 aa24.3■■□□□ 1.48
CYSTM1-201ENST00000261811 COL15A1P39059 1388 aa24.3■■□□□ 1.48
CYSTM1-201ENST00000261811 ERBB4Q15303 1308 aa24.29■■□□□ 1.48
CYSTM1-201ENST00000261811 ZNF330Q9Y3S2 320 aaPredicted RBP24.29■■□□□ 1.48
CYSTM1-201ENST00000261811 AMIGO3Q86WK7 504 aa24.28■■□□□ 1.48
CYSTM1-201ENST00000261811 MYH16Q9H6N6 1097 aa24.28■■□□□ 1.48
CYSTM1-201ENST00000261811 PPP1R1BQ9UD71 204 aaPredicted RBP24.28■■□□□ 1.48
CYSTM1-201ENST00000261811 EIF2S2P20042 333 aaKnown RBP24.27■■□□□ 1.48
CYSTM1-201ENST00000261811 EIF5P55010 431 aaKnown RBP24.27■■□□□ 1.48
CYSTM1-201ENST00000261811 NLGN1Q8N2Q7 840 aa24.27■■□□□ 1.48
CYSTM1-201ENST00000261811 CACNA1FO60840 1977 aa24.26■■□□□ 1.47
CYSTM1-201ENST00000261811 SMIM5Q71RC9 77 aa24.26■■□□□ 1.47
CYSTM1-201ENST00000261811 ARXQ96QS3 562 aa24.26■■□□□ 1.47
CYSTM1-201ENST00000261811 GOLGA2Q08379 1002 aa24.25■■□□□ 1.47
CYSTM1-201ENST00000261811 DUSP27Q5VZP5 1158 aa24.25■■□□□ 1.47
CYSTM1-201ENST00000261811 USP42Q9H9J4 1324 aaKnown RBP24.24■■□□□ 1.47
CYSTM1-201ENST00000261811 NARFQ9UHQ1 456 aa24.24■■□□□ 1.47
CYSTM1-201ENST00000261811 TSR2Q969E8 191 aaKnown RBP24.23■■□□□ 1.47
CYSTM1-201ENST00000261811 HDGFL1Q5TGJ6 251 aa24.22■■□□□ 1.47
CYSTM1-201ENST00000261811 MSL1Q68DK7 614 aa24.22■■□□□ 1.47
CYSTM1-201ENST00000261811 BCORQ6W2J9 1755 aa24.22■■□□□ 1.47
CYSTM1-201ENST00000261811 SCN7AQ01118 1682 aa24.21■■□□□ 1.47
CYSTM1-201ENST00000261811 ZNF521Q96K83 1311 aa24.2■■□□□ 1.47
CYSTM1-201ENST00000261811 FANCIQ9NVI1 1328 aa24.2■■□□□ 1.47
CYSTM1-201ENST00000261811 GYS1P13807 737 aa24.2■■□□□ 1.46
CYSTM1-201ENST00000261811 MYL6BP14649 208 aa24.2■■□□□ 1.46
CYSTM1-201ENST00000261811 PIP4K2AP48426 406 aaPredicted RBP24.2■■□□□ 1.46
CYSTM1-201ENST00000261811 KRT24Q2M2I5 525 aa24.2■■□□□ 1.46
CYSTM1-201ENST00000261811 USPL1Q5W0Q7 1092 aa24.2■■□□□ 1.46
CYSTM1-201ENST00000261811 DZIP3Q86Y13 1208 aaKnown RBP24.2■■□□□ 1.46
CYSTM1-201ENST00000261811 NBPF26B4DH59 902 aa24.19■■□□□ 1.46
CYSTM1-201ENST00000261811 E9PSI1 815 aa24.19■■□□□ 1.46
CYSTM1-201ENST00000261811 PTGER2P43116 358 aa24.19■■□□□ 1.46
CYSTM1-201ENST00000261811 NBPF10Q6P3W6 841 aaKnown RBP24.19■■□□□ 1.46
CYSTM1-201ENST00000261811 NBPF15Q8N660 670 aa24.19■■□□□ 1.46
CYSTM1-201ENST00000261811 DBF4Q9UBU7 674 aaPredicted RBP24.19■■□□□ 1.46
CYSTM1-201ENST00000261811 SRP68Q9UHB9 627 aaKnown RBP24.19■■□□□ 1.46
CYSTM1-201ENST00000261811 TBC1D2BQ9UPU7 963 aa24.19■■□□□ 1.46
CYSTM1-201ENST00000261811 ZNF652Q9Y2D9 606 aa24.19■■□□□ 1.46
CYSTM1-201ENST00000261811 NUP98P52948 1817 aa24.19■■□□□ 1.46
CYSTM1-201ENST00000261811 ELL2O00472 640 aaPredicted RBP24.18■■□□□ 1.46
CYSTM1-201ENST00000261811 KIF6Q6ZMV9 814 aa24.18■■□□□ 1.46
CYSTM1-201ENST00000261811 NECTIN2Q92692 538 aa24.18■■□□□ 1.46
CYSTM1-201ENST00000261811 HNRNPUQ00839 825 aaKnown RBP eCLIP24.17■■□□□ 1.46
CYSTM1-201ENST00000261811 TWISTNBQ3B726 338 aaPredicted RBP24.17■■□□□ 1.46
CYSTM1-201ENST00000261811 CCDC30Q5VVM6 783 aa24.17■■□□□ 1.46
CYSTM1-201ENST00000261811 C8orf58Q8NAV2 365 aa24.17■■□□□ 1.46
CYSTM1-201ENST00000261811 SGIP1Q9BQI5 828 aa24.17■■□□□ 1.46
CYSTM1-201ENST00000261811 DDX21Q9NR30 783 aaKnown RBP eCLIP24.17■■□□□ 1.46
CYSTM1-201ENST00000261811 PARP3Q9Y6F1 533 aa24.16■■□□□ 1.46
CYSTM1-201ENST00000261811 RGL2O15211 777 aa24.15■■□□□ 1.46
CYSTM1-201ENST00000261811 HYPKQ9NX55 129 aa24.15■■□□□ 1.46
CYSTM1-201ENST00000261811 MMP10P09238 476 aa24.14■■□□□ 1.46
CYSTM1-201ENST00000261811 CLEC4GQ6UXB4 293 aa24.14■■□□□ 1.46
CYSTM1-201ENST00000261811 STK31Q9BXU1 1019 aa24.14■■□□□ 1.46
CYSTM1-201ENST00000261811 FKBP8Q14318 412 aa24.13■■□□□ 1.45
CYSTM1-201ENST00000261811 CHPF2Q9P2E5 772 aa24.13■■□□□ 1.45
CYSTM1-201ENST00000261811 EXOSC9Q06265 439 aaKnown RBP24.12■■□□□ 1.45
CYSTM1-201ENST00000261811 AFDNP55196 1824 aaKnown RBP24.12■■□□□ 1.45
CYSTM1-201ENST00000261811 ERVV-1B6SEH8 477 aa24.11■■□□□ 1.45
CYSTM1-201ENST00000261811 CAMTA2O94983 1202 aa24.11■■□□□ 1.45
CYSTM1-201ENST00000261811 SLFN5Q08AF3 891 aa24.11■■□□□ 1.45
CYSTM1-201ENST00000261811 PDIA6Q15084 440 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms