RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 STARD3NLO95772 234 aa26.73■■□□□ 1.87
RTCA-201ENST00000260563 CNTNAP4Q9C0A0 1308 aa26.73■■□□□ 1.87
RTCA-201ENST00000260563 HOXB7P09629 217 aa26.71■■□□□ 1.87
RTCA-201ENST00000260563 CYP19A1P11511 503 aaPredicted RBP26.71■■□□□ 1.87
RTCA-201ENST00000260563 AK7Q96M32 723 aa26.7■■□□□ 1.87
RTCA-201ENST00000260563 USP16Q9Y5T5 823 aa26.7■■□□□ 1.87
RTCA-201ENST00000260563 CRKLP46109 303 aaKnown RBP26.7■■□□□ 1.86
RTCA-201ENST00000260563 NBPF14Q5TI25 921 aa26.7■■□□□ 1.86
RTCA-201ENST00000260563 C8orf58Q8NAV2 365 aa26.7■■□□□ 1.86
RTCA-201ENST00000260563 ANO8Q9HCE9 1232 aaPredicted RBP26.7■■□□□ 1.86
RTCA-201ENST00000260563 EXOSC9Q06265 439 aaKnown RBP26.69■■□□□ 1.86
RTCA-201ENST00000260563 ZNF827Q17R98 1081 aa26.69■■□□□ 1.86
RTCA-201ENST00000260563 STK32BQ9NY57 414 aa26.69■■□□□ 1.86
RTCA-201ENST00000260563 SOS1Q07889 1333 aaPredicted RBP26.69■■□□□ 1.86
RTCA-201ENST00000260563 ELL2O00472 640 aaPredicted RBP26.68■■□□□ 1.86
RTCA-201ENST00000260563 RC3H1Q5TC82 1133 aaKnown RBP26.68■■□□□ 1.86
RTCA-201ENST00000260563 AKT1S1Q96B36 256 aa26.68■■□□□ 1.86
RTCA-201ENST00000260563 CCDC87Q9NVE4 849 aa26.68■■□□□ 1.86
RTCA-201ENST00000260563 C4AP0C0L4 1744 aa26.68■■□□□ 1.86
RTCA-201ENST00000260563 TWISTNBQ3B726 338 aaPredicted RBP26.67■■□□□ 1.86
RTCA-201ENST00000260563 TSPYL6Q8N831 410 aa26.67■■□□□ 1.86
RTCA-201ENST00000260563 CACNA1FO60840 1977 aa26.67■■□□□ 1.86
RTCA-201ENST00000260563 EIF2S2P20042 333 aaKnown RBP26.66■■□□□ 1.86
RTCA-201ENST00000260563 GNPATO15228 680 aa26.65■■□□□ 1.86
RTCA-201ENST00000260563 SLC15A2Q16348 729 aa26.65■■□□□ 1.86
RTCA-201ENST00000260563 HDGFL1Q5TGJ6 251 aa26.65■■□□□ 1.86
RTCA-201ENST00000260563 ZBTB1Q9Y2K1 713 aa26.65■■□□□ 1.86
RTCA-201ENST00000260563 INTS5Q6P9B9 1019 aaKnown RBP26.64■■□□□ 1.85
RTCA-201ENST00000260563 TFCP2L1Q9NZI6 479 aa26.64■■□□□ 1.85
RTCA-201ENST00000260563 ERBB4Q15303 1308 aa26.63■■□□□ 1.85
RTCA-201ENST00000260563 A1BGP04217 495 aa26.63■■□□□ 1.85
RTCA-201ENST00000260563 NECTIN2Q92692 538 aa26.63■■□□□ 1.85
RTCA-201ENST00000260563 CANXP27824 592 aaKnown RBP26.62■■□□□ 1.85
RTCA-201ENST00000260563 CHMP4AQ9BY43 222 aa26.62■■□□□ 1.85
RTCA-201ENST00000260563 RTCBQ9Y3I0 505 aaKnown RBP26.62■■□□□ 1.85
RTCA-201ENST00000260563 COL15A1P39059 1388 aa26.6■■□□□ 1.85
RTCA-201ENST00000260563 CASZ1Q86V15 1759 aa26.6■■□□□ 1.85
RTCA-201ENST00000260563 RPS6KA4O75676 772 aa26.6■■□□□ 1.85
RTCA-201ENST00000260563 PHF14O94880 888 aa26.6■■□□□ 1.85
RTCA-201ENST00000260563 SSFA2P28290 1259 aa26.6■■□□□ 1.85
RTCA-201ENST00000260563 PIP4K2AP48426 406 aaPredicted RBP26.6■■□□□ 1.85
RTCA-201ENST00000260563 RCAN3Q9UKA8 241 aa26.6■■□□□ 1.85
RTCA-201ENST00000260563 BCORQ6W2J9 1755 aa26.59■■□□□ 1.85
RTCA-201ENST00000260563 VAMP4O75379 141 aa26.59■■□□□ 1.85
RTCA-201ENST00000260563 IL6STP40189 918 aaPredicted RBP26.59■■□□□ 1.85
RTCA-201ENST00000260563 CCDC30Q5VVM6 783 aa26.59■■□□□ 1.85
RTCA-201ENST00000260563 SCN7AQ01118 1682 aa26.58■■□□□ 1.85
RTCA-201ENST00000260563 CHPF2Q9P2E5 772 aa26.58■■□□□ 1.85
RTCA-201ENST00000260563 ZNF330Q9Y3S2 320 aaPredicted RBP26.58■■□□□ 1.85
RTCA-201ENST00000260563 NBPF26B4DH59 902 aa26.57■■□□□ 1.84
RTCA-201ENST00000260563 CT47B1P0C2W7 299 aaPredicted RBP26.57■■□□□ 1.84
RTCA-201ENST00000260563 NBPF10Q6P3W6 841 aaKnown RBP26.57■■□□□ 1.84
RTCA-201ENST00000260563 NPM2Q86SE8 214 aaKnown RBP26.57■■□□□ 1.84
RTCA-201ENST00000260563 AMIGO3Q86WK7 504 aa26.57■■□□□ 1.84
RTCA-201ENST00000260563 NBPF15Q8N660 670 aa26.57■■□□□ 1.84
RTCA-201ENST00000260563 PNPLA7Q6ZV29 1317 aa26.57■■□□□ 1.84
RTCA-201ENST00000260563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.56■■□□□ 1.84
RTCA-201ENST00000260563 MYL6BP14649 208 aa26.56■■□□□ 1.84
RTCA-201ENST00000260563 ADRA2BP18089 450 aa26.56■■□□□ 1.84
RTCA-201ENST00000260563 FLAD1Q8NFF5 587 aa26.56■■□□□ 1.84
RTCA-201ENST00000260563 DBF4Q9UBU7 674 aaPredicted RBP26.56■■□□□ 1.84
RTCA-201ENST00000260563 R3HDM1Q15032 1099 aaKnown RBP26.55■■□□□ 1.84
RTCA-201ENST00000260563 DDX21Q9NR30 783 aaKnown RBP eCLIP26.55■■□□□ 1.84
RTCA-201ENST00000260563 EIF5P55010 431 aaKnown RBP26.55■■□□□ 1.84
RTCA-201ENST00000260563 PDIA6Q15084 440 aa26.55■■□□□ 1.84
RTCA-201ENST00000260563 TRAPPC3LQ5T215 181 aa26.55■■□□□ 1.84
RTCA-201ENST00000260563 STK31Q9BXU1 1019 aa26.55■■□□□ 1.84
RTCA-201ENST00000260563 SMIM5Q71RC9 77 aa26.54■■□□□ 1.84
RTCA-201ENST00000260563 ANXA1P04083 346 aa26.53■■□□□ 1.84
RTCA-201ENST00000260563 PROSER3Q2NL68 480 aa26.53■■□□□ 1.84
RTCA-201ENST00000260563 SUPT16HQ9Y5B9 1047 aaKnown RBP26.53■■□□□ 1.84
RTCA-201ENST00000260563 A0A087WZG4 1122 aa26.52■■□□□ 1.84
RTCA-201ENST00000260563 ZNF428Q96B54 188 aa26.52■■□□□ 1.84
RTCA-201ENST00000260563 PSDA5PKW4 1024 aaPredicted RBP26.51■■□□□ 1.83
RTCA-201ENST00000260563 TCERG1O14776 1098 aaKnown RBP26.51■■□□□ 1.83
RTCA-201ENST00000260563 COL23A1Q86Y22 540 aaPredicted RBP26.51■■□□□ 1.83
RTCA-201ENST00000260563 MSH5O43196 834 aa26.5■■□□□ 1.83
RTCA-201ENST00000260563 RFC4P35249 363 aa26.5■■□□□ 1.83
RTCA-201ENST00000260563 ARHGEF1Q92888 912 aaKnown RBP26.5■■□□□ 1.83
RTCA-201ENST00000260563 HYPKQ9NX55 129 aa26.5■■□□□ 1.83
RTCA-201ENST00000260563 NUP98P52948 1817 aa26.5■■□□□ 1.83
RTCA-201ENST00000260563 ARFGEF2Q9Y6D5 1785 aa26.5■■□□□ 1.83
RTCA-201ENST00000260563 LRP10Q7Z4F1 713 aa26.49■■□□□ 1.83
RTCA-201ENST00000260563 ARXQ96QS3 562 aa26.49■■□□□ 1.83
RTCA-201ENST00000260563 ANKRD36CQ5JPF3 1778 aa26.48■■□□□ 1.83
RTCA-201ENST00000260563 DZIP3Q86Y13 1208 aaKnown RBP26.48■■□□□ 1.83
RTCA-201ENST00000260563 SLC4A2P04920 1241 aa26.47■■□□□ 1.83
RTCA-201ENST00000260563 RARSP54136 660 aaKnown RBP26.47■■□□□ 1.83
RTCA-201ENST00000260563 USP42Q9H9J4 1324 aaKnown RBP26.47■■□□□ 1.83
RTCA-201ENST00000260563 ZPR1O75312 459 aa26.46■■□□□ 1.83
RTCA-201ENST00000260563 ALDH1L2Q3SY69 923 aa26.46■■□□□ 1.83
RTCA-201ENST00000260563 KIF6Q6ZMV9 814 aa26.46■■□□□ 1.83
RTCA-201ENST00000260563 TBC1D2BQ9UPU7 963 aa26.46■■□□□ 1.83
RTCA-201ENST00000260563 AIMP1Q12904 312 aaKnown RBP26.45■■□□□ 1.83
RTCA-201ENST00000260563 XAGE3Q8WTP9 111 aa26.45■■□□□ 1.83
RTCA-201ENST00000260563 NARFQ9UHQ1 456 aa26.45■■□□□ 1.83
RTCA-201ENST00000260563 COL24A1Q17RW2 1714 aa26.45■■□□□ 1.82
RTCA-201ENST00000260563 COPS6Q7L5N1 327 aa26.44■■□□□ 1.82
RTCA-201ENST00000260563 PDGFDQ9GZP0 370 aaPredicted RBP26.44■■□□□ 1.82
RTCA-201ENST00000260563 PHAXQ9H814 394 aaKnown RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms