RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 NAP1L2Q9ULW6 460 aaPredicted RBP16.3■□□□□ 0.2
VHL-201ENST00000256474 BTBD11A6QL63 1104 aa16.29■□□□□ 0.2
VHL-201ENST00000256474 USP6P35125 1406 aa16.29■□□□□ 0.2
VHL-201ENST00000256474 ZNF445P59923 1031 aa16.29■□□□□ 0.2
VHL-201ENST00000256474 CRB1P82279 1406 aa16.29■□□□□ 0.2
VHL-201ENST00000256474 C17orf53Q8N3J3 647 aaPredicted RBP16.29■□□□□ 0.2
VHL-201ENST00000256474 CLTCQ00610 1675 aaKnown RBP16.29■□□□□ 0.2
VHL-201ENST00000256474 CNTROBQ8N137 903 aa16.29■□□□□ 0.2
VHL-201ENST00000256474 MYL6BP14649 208 aa16.29■□□□□ 0.2
VHL-201ENST00000256474 AK2P54819 239 aa16.29■□□□□ 0.2
VHL-201ENST00000256474 KLHDC4Q8TBB5 520 aa16.29■□□□□ 0.2
VHL-201ENST00000256474 SETD1BQ9UPS6 1966 aaKnown RBP16.29■□□□□ 0.2
VHL-201ENST00000256474 FAM173BQ6P4H8 233 aa16.28■□□□□ 0.2
VHL-201ENST00000256474 HCLS1P14317 486 aaPredicted RBP16.28■□□□□ 0.2
VHL-201ENST00000256474 MBD3O95983 291 aa16.28■□□□□ 0.2
VHL-201ENST00000256474 AACSQ86V21 672 aa16.28■□□□□ 0.2
VHL-201ENST00000256474 CLASRPQ8N2M8 674 aaKnown RBP16.28■□□□□ 0.2
VHL-201ENST00000256474 DNAAF4Q8WXU2 420 aa16.28■□□□□ 0.2
VHL-201ENST00000256474 NBPF6Q5VWK0 638 aa16.27■□□□□ 0.2
VHL-201ENST00000256474 SYAP1Q96A49 352 aaPredicted RBP16.27■□□□□ 0.2
VHL-201ENST00000256474 NBPF4Q96M43 638 aa16.27■□□□□ 0.2
VHL-201ENST00000256474 KNDC1Q76NI1 1749 aa16.27■□□□□ 0.19
VHL-201ENST00000256474 BRD1O95696 1058 aa16.27■□□□□ 0.19
VHL-201ENST00000256474 SPC24Q8NBT2 197 aa16.27■□□□□ 0.19
VHL-201ENST00000256474 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.19
VHL-201ENST00000256474 MCM2P49736 904 aa16.26■□□□□ 0.19
VHL-201ENST00000256474 GIMAP6Q6P9H5 292 aa16.26■□□□□ 0.19
VHL-201ENST00000256474 KIF1BPQ96EK5 621 aa16.26■□□□□ 0.19
VHL-201ENST00000256474 PPP1R9BQ96SB3 815 aa16.26■□□□□ 0.19
VHL-201ENST00000256474 BOLA2Q9H3K6 86 aa16.26■□□□□ 0.19
VHL-201ENST00000256474 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
VHL-201ENST00000256474 UBE2Q2Q8WVN8 375 aa16.26■□□□□ 0.19
VHL-201ENST00000256474 PPP6R1Q9UPN7 881 aa16.26■□□□□ 0.19
VHL-201ENST00000256474 MAP3K2Q9Y2U5 619 aa16.26■□□□□ 0.19
VHL-201ENST00000256474 KIF24Q5T7B8 1368 aa16.26■□□□□ 0.19
VHL-201ENST00000256474 CAMK4Q16566 473 aa16.25■□□□□ 0.19
VHL-201ENST00000256474 PROSER3Q2NL68 480 aa16.25■□□□□ 0.19
VHL-201ENST00000256474 C1orf141Q5JVX7 400 aa16.25■□□□□ 0.19
VHL-201ENST00000256474 SNX14Q9Y5W7 946 aa16.25■□□□□ 0.19
VHL-201ENST00000256474 WDR33Q9C0J8 1336 aaKnown RBP16.25■□□□□ 0.19
VHL-201ENST00000256474 SBNO1A3KN83 1393 aa16.25■□□□□ 0.19
VHL-201ENST00000256474 LARGE1O95461 756 aa16.25■□□□□ 0.19
VHL-201ENST00000256474 SLC39A6Q13433 755 aa16.25■□□□□ 0.19
VHL-201ENST00000256474 OSBPL3Q9H4L5 887 aa16.25■□□□□ 0.19
VHL-201ENST00000256474 IBTKQ9P2D0 1353 aaPredicted RBP16.25■□□□□ 0.19
VHL-201ENST00000256474 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.24■□□□□ 0.19
VHL-201ENST00000256474 TTC12Q9H892 705 aaPredicted RBP16.24■□□□□ 0.19
VHL-201ENST00000256474 RICTORQ6R327 1708 aa16.24■□□□□ 0.19
VHL-201ENST00000256474 UQCRHLA0A096LP55 91 aa16.24■□□□□ 0.19
VHL-201ENST00000256474 UQCRHP07919 91 aa16.24■□□□□ 0.19
VHL-201ENST00000256474 PTH1RQ03431 593 aa16.24■□□□□ 0.19
VHL-201ENST00000256474 TSC1Q92574 1164 aa16.24■□□□□ 0.19
VHL-201ENST00000256474 IGSF1Q8N6C5 1336 aa16.24■□□□□ 0.19
VHL-201ENST00000256474 DLG5Q8TDM6 1919 aa16.24■□□□□ 0.19
VHL-201ENST00000256474 DNM1Q05193 864 aaKnown RBP16.23■□□□□ 0.19
VHL-201ENST00000256474 ADCK5Q3MIX3 580 aa16.23■□□□□ 0.19
VHL-201ENST00000256474 MAP3K5Q99683 1374 aa16.23■□□□□ 0.19
VHL-201ENST00000256474 ZC3H6P61129 1189 aaKnown RBP16.23■□□□□ 0.19
VHL-201ENST00000256474 FGD1P98174 961 aa16.23■□□□□ 0.19
VHL-201ENST00000256474 EDC3Q96F86 508 aaKnown RBP16.23■□□□□ 0.19
VHL-201ENST00000256474 SYT1P21579 422 aa16.23■□□□□ 0.19
VHL-201ENST00000256474 ANKRD26Q9UPS8 1709 aa16.22■□□□□ 0.19
VHL-201ENST00000256474 GJB2P29033 226 aa16.22■□□□□ 0.19
VHL-201ENST00000256474 CEBPZQ03701 1054 aaKnown RBP16.22■□□□□ 0.19
VHL-201ENST00000256474 PDRG1Q9NUG6 133 aa16.22■□□□□ 0.19
VHL-201ENST00000256474 CDC42BPGQ6DT37 1551 aa16.22■□□□□ 0.19
VHL-201ENST00000256474 STX6O43752 255 aa16.22■□□□□ 0.19
VHL-201ENST00000256474 FAM227BQ96M60 508 aa16.22■□□□□ 0.19
VHL-201ENST00000256474 FSD1Q9BTV5 496 aa16.22■□□□□ 0.19
VHL-201ENST00000256474 TFIP11Q9UBB9 837 aaKnown RBP16.22■□□□□ 0.19
VHL-201ENST00000256474 DLC1Q96QB1 1528 aa16.22■□□□□ 0.19
VHL-201ENST00000256474 RIMS1Q86UR5 1692 aaKnown RBP16.22■□□□□ 0.19
VHL-201ENST00000256474 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
VHL-201ENST00000256474 PHF8Q9UPP1 1060 aa16.22■□□□□ 0.19
VHL-201ENST00000256474 TTC21AQ8NDW8 1320 aa16.21■□□□□ 0.19
VHL-201ENST00000256474 GOLGA6L4A6NEF3 574 aa16.21■□□□□ 0.19
VHL-201ENST00000256474 CLEC17AQ6ZS10 378 aa16.21■□□□□ 0.19
VHL-201ENST00000256474 FBXW7Q969H0 707 aa16.21■□□□□ 0.19
VHL-201ENST00000256474 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.19
VHL-201ENST00000256474 ARHGEF10O15013 1369 aa16.21■□□□□ 0.19
VHL-201ENST00000256474 SGSM2O43147 1006 aa16.21■□□□□ 0.19
VHL-201ENST00000256474 G3BP1Q13283 466 aaKnown RBP eCLIP16.21■□□□□ 0.19
VHL-201ENST00000256474 RIC3Q7Z5B4 369 aa16.21■□□□□ 0.19
VHL-201ENST00000256474 ZNF330Q9Y3S2 320 aaPredicted RBP16.21■□□□□ 0.19
VHL-201ENST00000256474 RUFY3Q7L099 469 aa16.21■□□□□ 0.19
VHL-201ENST00000256474 SSH3Q8TE77 659 aa16.21■□□□□ 0.19
VHL-201ENST00000256474 CCDC39Q9UFE4 941 aa16.21■□□□□ 0.19
VHL-201ENST00000256474 LIMCH1Q9UPQ0 1083 aa16.21■□□□□ 0.19
VHL-201ENST00000256474 OVOS2A0A0J9YW53 1432 aa16.2■□□□□ 0.18
VHL-201ENST00000256474 OVOS2Q6IE36 1432 aa16.2■□□□□ 0.18
VHL-201ENST00000256474 HSPA4P34932 840 aa16.2■□□□□ 0.18
VHL-201ENST00000256474 OFD1O75665 1012 aa16.2■□□□□ 0.18
VHL-201ENST00000256474 ZKSCAN1P17029 563 aaPredicted RBP16.2■□□□□ 0.18
VHL-201ENST00000256474 EIF4A1P60842 406 aaKnown RBP16.2■□□□□ 0.18
VHL-201ENST00000256474 KIAA2012Q0VF49 1180 aa16.2■□□□□ 0.18
VHL-201ENST00000256474 ZKSCAN5Q9Y2L8 839 aa16.2■□□□□ 0.18
VHL-201ENST00000256474 RAB11FIP3O75154 756 aa16.19■□□□□ 0.18
VHL-201ENST00000256474 HSP90B1P14625 803 aaKnown RBP16.19■□□□□ 0.18
VHL-201ENST00000256474 PI4K2BQ8TCG2 481 aa16.19■□□□□ 0.18
VHL-201ENST00000256474 GPATCH3Q96I76 525 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms