RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 TXNRD1Q16881 649 aa25.96■■□□□ 1.75
SNRPA-201ENST00000243563 PROSER3Q2NL68 480 aa25.96■■□□□ 1.75
SNRPA-201ENST00000243563 DEFB132Q7Z7B7 95 aa25.96■■□□□ 1.75
SNRPA-201ENST00000243563 SSH1Q8WYL5 1049 aa25.96■■□□□ 1.75
SNRPA-201ENST00000243563 NUP188Q5SRE5 1749 aa25.95■■□□□ 1.75
SNRPA-201ENST00000243563 A1BGP04217 495 aa25.95■■□□□ 1.74
SNRPA-201ENST00000243563 CACNA1FO60840 1977 aa25.94■■□□□ 1.74
SNRPA-201ENST00000243563 BCAR3O75815 825 aa25.94■■□□□ 1.74
SNRPA-201ENST00000243563 CT47B1P0C2W7 299 aaPredicted RBP25.94■■□□□ 1.74
SNRPA-201ENST00000243563 PDIA6Q15084 440 aa25.94■■□□□ 1.74
SNRPA-201ENST00000243563 SOS1Q07889 1333 aaPredicted RBP25.93■■□□□ 1.74
SNRPA-201ENST00000243563 NBPF26B4DH59 902 aa25.93■■□□□ 1.74
SNRPA-201ENST00000243563 EZH2Q15910 746 aaKnown RBP25.93■■□□□ 1.74
SNRPA-201ENST00000243563 NBPF14Q5TI25 921 aa25.93■■□□□ 1.74
SNRPA-201ENST00000243563 NBPF10Q6P3W6 841 aaKnown RBP25.93■■□□□ 1.74
SNRPA-201ENST00000243563 NBPF15Q8N660 670 aa25.93■■□□□ 1.74
SNRPA-201ENST00000243563 CAMKK2Q96RR4 588 aa25.93■■□□□ 1.74
SNRPA-201ENST00000243563 CHPF2Q9P2E5 772 aa25.93■■□□□ 1.74
SNRPA-201ENST00000243563 RCAN3Q9UKA8 241 aa25.93■■□□□ 1.74
SNRPA-201ENST00000243563 TUBGCP6Q96RT7 1819 aa25.93■■□□□ 1.74
SNRPA-201ENST00000243563 UPF1Q92900 1129 aaKnown RBP eCLIP25.92■■□□□ 1.74
SNRPA-201ENST00000243563 INTS5Q6P9B9 1019 aaKnown RBP25.91■■□□□ 1.74
SNRPA-201ENST00000243563 UBR3Q6ZT12 1888 aa25.9■■□□□ 1.74
SNRPA-201ENST00000243563 CRKLP46109 303 aaKnown RBP25.9■■□□□ 1.74
SNRPA-201ENST00000243563 G2E3Q7L622 706 aa25.9■■□□□ 1.74
SNRPA-201ENST00000243563 LRP10Q7Z4F1 713 aa25.9■■□□□ 1.74
SNRPA-201ENST00000243563 MRPL50Q8N5N7 158 aaKnown RBP25.9■■□□□ 1.74
SNRPA-201ENST00000243563 ZBTB1Q9Y2K1 713 aa25.9■■□□□ 1.74
SNRPA-201ENST00000243563 CCDC30Q5VVM6 783 aa25.89■■□□□ 1.74
SNRPA-201ENST00000243563 TEX13AQ9BXU3 409 aaPredicted RBP25.89■■□□□ 1.74
SNRPA-201ENST00000243563 SLC27A3Q5K4L6 730 aa25.88■■□□□ 1.73
SNRPA-201ENST00000243563 SMIM5Q71RC9 77 aa25.88■■□□□ 1.73
SNRPA-201ENST00000243563 SMC4Q9NTJ3 1288 aa25.88■■□□□ 1.73
SNRPA-201ENST00000243563 SF3B2Q13435 895 aaKnown RBP25.88■■□□□ 1.73
SNRPA-201ENST00000243563 ALDH1L2Q3SY69 923 aa25.88■■□□□ 1.73
SNRPA-201ENST00000243563 AMIGO3Q86WK7 504 aa25.88■■□□□ 1.73
SNRPA-201ENST00000243563 STARD3NLO95772 234 aa25.87■■□□□ 1.73
SNRPA-201ENST00000243563 CENPBP07199 599 aaPredicted RBP25.87■■□□□ 1.73
SNRPA-201ENST00000243563 MYL6BP14649 208 aa25.87■■□□□ 1.73
SNRPA-201ENST00000243563 PHAXQ9H814 394 aaKnown RBP25.87■■□□□ 1.73
SNRPA-201ENST00000243563 SLC4A2P04920 1241 aa25.86■■□□□ 1.73
SNRPA-201ENST00000243563 BAG6P46379 1132 aa25.86■■□□□ 1.73
SNRPA-201ENST00000243563 ZNF428Q96B54 188 aa25.86■■□□□ 1.73
SNRPA-201ENST00000243563 CCDC87Q9NVE4 849 aa25.86■■□□□ 1.73
SNRPA-201ENST00000243563 CANXP27824 592 aaKnown RBP25.85■■□□□ 1.73
SNRPA-201ENST00000243563 DDX21Q9NR30 783 aaKnown RBP eCLIP25.85■■□□□ 1.73
SNRPA-201ENST00000243563 CNTNAP4Q9C0A0 1308 aa25.85■■□□□ 1.73
SNRPA-201ENST00000243563 C4AP0C0L4 1744 aa25.85■■□□□ 1.73
SNRPA-201ENST00000243563 CCDC125Q86Z20 511 aa25.85■■□□□ 1.73
SNRPA-201ENST00000243563 DBF4Q9UBU7 674 aaPredicted RBP25.85■■□□□ 1.73
SNRPA-201ENST00000243563 STK31Q9BXU1 1019 aa25.84■■□□□ 1.73
SNRPA-201ENST00000243563 TNNQ9UQP3 1299 aa25.84■■□□□ 1.73
SNRPA-201ENST00000243563 ZNF827Q17R98 1081 aa25.83■■□□□ 1.73
SNRPA-201ENST00000243563 ERBB4Q15303 1308 aa25.83■■□□□ 1.73
SNRPA-201ENST00000243563 PLIN1O60240 522 aa25.81■■□□□ 1.72
SNRPA-201ENST00000243563 ARFGEF2Q9Y6D5 1785 aa25.81■■□□□ 1.72
SNRPA-201ENST00000243563 ANO8Q9HCE9 1232 aaPredicted RBP25.81■■□□□ 1.72
SNRPA-201ENST00000243563 BRPF1P55201 1214 aaPredicted RBP25.8■■□□□ 1.72
SNRPA-201ENST00000243563 RC3H1Q5TC82 1133 aaKnown RBP25.8■■□□□ 1.72
SNRPA-201ENST00000243563 NOB1Q9ULX3 412 aaKnown RBP25.8■■□□□ 1.72
SNRPA-201ENST00000243563 ZNF330Q9Y3S2 320 aaPredicted RBP25.8■■□□□ 1.72
SNRPA-201ENST00000243563 SUPT16HQ9Y5B9 1047 aaKnown RBP25.8■■□□□ 1.72
SNRPA-201ENST00000243563 GNPATO15228 680 aa25.79■■□□□ 1.72
SNRPA-201ENST00000243563 TTLL7Q6ZT98 887 aa25.79■■□□□ 1.72
SNRPA-201ENST00000243563 XAGE3Q8WTP9 111 aa25.79■■□□□ 1.72
SNRPA-201ENST00000243563 BCORQ6W2J9 1755 aa25.79■■□□□ 1.72
SNRPA-201ENST00000243563 EIF5P55010 431 aaKnown RBP25.78■■□□□ 1.72
SNRPA-201ENST00000243563 FLIIQ13045 1269 aa25.78■■□□□ 1.72
SNRPA-201ENST00000243563 FRAT1Q92837 279 aaPredicted RBP25.78■■□□□ 1.72
SNRPA-201ENST00000243563 AKT1S1Q96B36 256 aa25.78■■□□□ 1.72
SNRPA-201ENST00000243563 HYPKQ9NX55 129 aa25.78■■□□□ 1.72
SNRPA-201ENST00000243563 AIMP1Q12904 312 aaKnown RBP25.77■■□□□ 1.72
SNRPA-201ENST00000243563 COPS6Q7L5N1 327 aa25.77■■□□□ 1.72
SNRPA-201ENST00000243563 IL6STP40189 918 aaPredicted RBP25.77■■□□□ 1.72
SNRPA-201ENST00000243563 COL15A1P39059 1388 aa25.76■■□□□ 1.71
SNRPA-201ENST00000243563 AK7Q96M32 723 aa25.76■■□□□ 1.71
SNRPA-201ENST00000243563 QSER1Q2KHR3 1735 aa25.75■■□□□ 1.71
SNRPA-201ENST00000243563 RNF123Q5XPI4 1314 aa25.75■■□□□ 1.71
SNRPA-201ENST00000243563 SCN7AQ01118 1682 aa25.75■■□□□ 1.71
SNRPA-201ENST00000243563 RPS6KA4O75676 772 aa25.75■■□□□ 1.71
SNRPA-201ENST00000243563 ADCY9O60503 1353 aa25.75■■□□□ 1.71
SNRPA-201ENST00000243563 NUP98P52948 1817 aa25.75■■□□□ 1.71
SNRPA-201ENST00000243563 N4BP2Q86UW6 1770 aaPredicted RBP25.75■■□□□ 1.71
SNRPA-201ENST00000243563 RRP1P56182 461 aaKnown RBP25.74■■□□□ 1.71
SNRPA-201ENST00000243563 CHMP4AQ9BY43 222 aa25.74■■□□□ 1.71
SNRPA-201ENST00000243563 KIF16BQ96L93 1317 aa25.74■■□□□ 1.71
SNRPA-201ENST00000243563 F6X3S4 739 aa25.74■■□□□ 1.71
SNRPA-201ENST00000243563 PHF14O94880 888 aa25.74■■□□□ 1.71
SNRPA-201ENST00000243563 TRIM27P14373 513 aa25.73■■□□□ 1.71
SNRPA-201ENST00000243563 C20orf194Q5TEA3 1177 aa25.73■■□□□ 1.71
SNRPA-201ENST00000243563 TBC1D2BQ9UPU7 963 aa25.73■■□□□ 1.71
SNRPA-201ENST00000243563 FKBP5Q13451 457 aaPredicted RBP25.72■■□□□ 1.71
SNRPA-201ENST00000243563 ANKRD36CQ5JPF3 1778 aa25.72■■□□□ 1.71
SNRPA-201ENST00000243563 RTCBQ9Y3I0 505 aaKnown RBP25.71■■□□□ 1.71
SNRPA-201ENST00000243563 RLBP1P12271 317 aa25.7■■□□□ 1.7
SNRPA-201ENST00000243563 ARHGEF1Q92888 912 aaKnown RBP25.7■■□□□ 1.7
SNRPA-201ENST00000243563 CLUAP1Q96AJ1 413 aa25.7■■□□□ 1.7
SNRPA-201ENST00000243563 ZBTB3Q9H5J0 574 aa25.7■■□□□ 1.7
SNRPA-201ENST00000243563 PTPRCP08575 1304 aa25.69■■□□□ 1.7
SNRPA-201ENST00000243563 AFDNP55196 1824 aaKnown RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms