RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
APOA1-201ENST00000236850 MIER1Q8N108 512 aa20.31■□□□□ 0.84
APOA1-201ENST00000236850 NPM2Q86SE8 214 aaKnown RBP20.3■□□□□ 0.84
APOA1-201ENST00000236850 SOS1Q07889 1333 aaPredicted RBP20.29■□□□□ 0.84
APOA1-201ENST00000236850 GYS1P13807 737 aa20.29■□□□□ 0.84
APOA1-201ENST00000236850 A0A087WZG4 1122 aa20.28■□□□□ 0.84
APOA1-201ENST00000236850 MMP10P09238 476 aa20.28■□□□□ 0.84
APOA1-201ENST00000236850 SNRPA1P09661 255 aaKnown RBP20.28■□□□□ 0.84
APOA1-201ENST00000236850 USP42Q9H9J4 1324 aaKnown RBP20.27■□□□□ 0.84
APOA1-201ENST00000236850 C4AP0C0L4 1744 aa20.27■□□□□ 0.84
APOA1-201ENST00000236850 RIPK4P57078 832 aa20.27■□□□□ 0.84
APOA1-201ENST00000236850 RUNDC1Q96C34 613 aa20.27■□□□□ 0.84
APOA1-201ENST00000236850 ZBTB1Q9Y2K1 713 aa20.27■□□□□ 0.84
APOA1-201ENST00000236850 PARP3Q9Y6F1 533 aa20.27■□□□□ 0.84
APOA1-201ENST00000236850 COL15A1P39059 1388 aa20.26■□□□□ 0.83
APOA1-201ENST00000236850 CANXP27824 592 aaKnown RBP20.26■□□□□ 0.83
APOA1-201ENST00000236850 GPR162Q16538 588 aa20.26■□□□□ 0.83
APOA1-201ENST00000236850 NARFQ9UHQ1 456 aa20.26■□□□□ 0.83
APOA1-201ENST00000236850 KCNQ3O43525 872 aa20.25■□□□□ 0.83
APOA1-201ENST00000236850 TMPOP42166 694 aaKnown RBP20.25■□□□□ 0.83
APOA1-201ENST00000236850 IL6STP40189 918 aaPredicted RBP20.24■□□□□ 0.83
APOA1-201ENST00000236850 EIF5P55010 431 aaKnown RBP20.24■□□□□ 0.83
APOA1-201ENST00000236850 NLGN2Q8NFZ4 835 aa20.24■□□□□ 0.83
APOA1-201ENST00000236850 SRP68Q9UHB9 627 aaKnown RBP20.24■□□□□ 0.83
APOA1-201ENST00000236850 ADAMTS8Q9UP79 889 aa20.24■□□□□ 0.83
APOA1-201ENST00000236850 BABAM1Q9NWV8 329 aa20.23■□□□□ 0.83
APOA1-201ENST00000236850 USPL1Q5W0Q7 1092 aa20.22■□□□□ 0.83
APOA1-201ENST00000236850 CCDC146Q8IYE0 955 aa20.22■□□□□ 0.83
APOA1-201ENST00000236850 GRIN3BO60391 1043 aa20.21■□□□□ 0.83
APOA1-201ENST00000236850 FKBP8Q14318 412 aa20.21■□□□□ 0.83
APOA1-201ENST00000236850 PELP1Q8IZL8 1130 aaKnown RBP20.21■□□□□ 0.83
APOA1-201ENST00000236850 A1BGP04217 495 aa20.2■□□□□ 0.82
APOA1-201ENST00000236850 THUMPD2Q9BTF0 503 aaKnown RBP20.2■□□□□ 0.82
APOA1-201ENST00000236850 MIS18AQ9NYP9 233 aa20.2■□□□□ 0.82
APOA1-201ENST00000236850 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
APOA1-201ENST00000236850 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
APOA1-201ENST00000236850 KDM3BQ7LBC6 1761 aa20.19■□□□□ 0.82
APOA1-201ENST00000236850 TGFB2P61812 414 aa20.19■□□□□ 0.82
APOA1-201ENST00000236850 NEUROD2Q15784 382 aa20.19■□□□□ 0.82
APOA1-201ENST00000236850 CCDC184Q52MB2 194 aa20.19■□□□□ 0.82
APOA1-201ENST00000236850 TM4SF1P30408 202 aa20.18■□□□□ 0.82
APOA1-201ENST00000236850 TSPYL4Q9UJ04 414 aa20.18■□□□□ 0.82
APOA1-201ENST00000236850 EIF4A1P60842 406 aaKnown RBP20.17■□□□□ 0.82
APOA1-201ENST00000236850 RRP7AQ9Y3A4 280 aaKnown RBP20.17■□□□□ 0.82
APOA1-201ENST00000236850 KIF13BQ9NQT8 1826 aa20.17■□□□□ 0.82
APOA1-201ENST00000236850 GIGYF1O75420 1035 aaPredicted RBP20.16■□□□□ 0.82
APOA1-201ENST00000236850 ZNF784Q8NCA9 323 aaPredicted RBP20.16■□□□□ 0.82
APOA1-201ENST00000236850 C10orf71Q711Q0 1435 aa20.16■□□□□ 0.82
APOA1-201ENST00000236850 MRS2Q9HD23 443 aa20.15■□□□□ 0.82
APOA1-201ENST00000236850 TBC1D2BQ9UPU7 963 aa20.15■□□□□ 0.82
APOA1-201ENST00000236850 SENP3-EIF4A1A0A087X0R7 540 aa20.14■□□□□ 0.81
APOA1-201ENST00000236850 PRAMEF22A3QJZ6 481 aa20.14■□□□□ 0.81
APOA1-201ENST00000236850 CCER2I3L3R5 266 aa20.14■□□□□ 0.81
APOA1-201ENST00000236850 POLRMTO00411 1230 aaKnown RBP20.14■□□□□ 0.81
APOA1-201ENST00000236850 DDR1Q08345 913 aa20.14■□□□□ 0.81
APOA1-201ENST00000236850 NFIXQ14938 502 aa20.14■□□□□ 0.81
APOA1-201ENST00000236850 DZIP3Q86Y13 1208 aaKnown RBP20.14■□□□□ 0.81
APOA1-201ENST00000236850 LAMB4A4D0S4 1761 aa20.13■□□□□ 0.81
APOA1-201ENST00000236850 CALD1Q05682 793 aaKnown RBP20.13■□□□□ 0.81
APOA1-201ENST00000236850 BCL2L12Q9HB09 334 aa20.13■□□□□ 0.81
APOA1-201ENST00000236850 ZNF652Q9Y2D9 606 aa20.13■□□□□ 0.81
APOA1-201ENST00000236850 RGL2O15211 777 aa20.12■□□□□ 0.81
APOA1-201ENST00000236850 CLEC4GQ6UXB4 293 aa20.12■□□□□ 0.81
APOA1-201ENST00000236850 TRIM35Q9UPQ4 493 aa20.12■□□□□ 0.81
APOA1-201ENST00000236850 ERBB4Q15303 1308 aa20.11■□□□□ 0.81
APOA1-201ENST00000236850 APAF1O14727 1248 aa20.11■□□□□ 0.81
APOA1-201ENST00000236850 SERPINB2P05120 415 aa20.11■□□□□ 0.81
APOA1-201ENST00000236850 YBX3P16989 372 aaKnown RBP eCLIP20.11■□□□□ 0.81
APOA1-201ENST00000236850 SCN7AQ01118 1682 aa20.1■□□□□ 0.81
APOA1-201ENST00000236850 CHL1O00533 1208 aa20.1■□□□□ 0.81
APOA1-201ENST00000236850 CAMTA2O94983 1202 aa20.1■□□□□ 0.81
APOA1-201ENST00000236850 SETDB2Q96T68 719 aa20.1■□□□□ 0.81
APOA1-201ENST00000236850 PXDNLA1KZ92 1463 aa20.1■□□□□ 0.81
APOA1-201ENST00000236850 AFDNP55196 1824 aaKnown RBP20.09■□□□□ 0.81
APOA1-201ENST00000236850 A0A0G2JLW4 131 aa20.09■□□□□ 0.81
APOA1-201ENST00000236850 NBPF26B4DH59 902 aa20.09■□□□□ 0.81
APOA1-201ENST00000236850 NBPF10Q6P3W6 841 aaKnown RBP20.09■□□□□ 0.81
APOA1-201ENST00000236850 BICDL1Q6ZP65 573 aa20.09■□□□□ 0.81
APOA1-201ENST00000236850 NBPF15Q8N660 670 aa20.09■□□□□ 0.81
APOA1-201ENST00000236850 LAS1LQ9Y4W2 734 aaKnown RBP20.09■□□□□ 0.81
APOA1-201ENST00000236850 CARMIL3Q8ND23 1372 aa20.08■□□□□ 0.81
APOA1-201ENST00000236850 GOLGB1Q14789 3259 aaKnown RBP20.08■□□□□ 0.81
APOA1-201ENST00000236850 DPEP1P16444 411 aa20.08■□□□□ 0.81
APOA1-201ENST00000236850 PIP4K2AP48426 406 aaPredicted RBP20.08■□□□□ 0.81
APOA1-201ENST00000236850 TBC1D9BQ66K14 1250 aa20.08■□□□□ 0.81
APOA1-201ENST00000236850 CFAP44Q96MT7 982 aa20.08■□□□□ 0.81
APOA1-201ENST00000236850 PDZRN3Q9UPQ7 1066 aa20.08■□□□□ 0.81
APOA1-201ENST00000236850 N4BP2Q86UW6 1770 aaPredicted RBP20.08■□□□□ 0.8
APOA1-201ENST00000236850 PIM2Q9P1W9 311 aa20.07■□□□□ 0.8
APOA1-201ENST00000236850 UTRNP46939 3433 aa20.07■□□□□ 0.8
APOA1-201ENST00000236850 NRXN2Q9P2S2 1712 aa20.07■□□□□ 0.8
APOA1-201ENST00000236850 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
APOA1-201ENST00000236850 NPHP1O15259 732 aa20.06■□□□□ 0.8
APOA1-201ENST00000236850 KIF6Q6ZMV9 814 aa20.06■□□□□ 0.8
APOA1-201ENST00000236850 GNAI1P63096 354 aa20.05■□□□□ 0.8
APOA1-201ENST00000236850 BCS1LQ9Y276 419 aa20.05■□□□□ 0.8
APOA1-201ENST00000236850 KIAA1551Q9HCM1 1747 aa20.05■□□□□ 0.8
APOA1-201ENST00000236850 ERVV-1B6SEH8 477 aa20.04■□□□□ 0.8
APOA1-201ENST00000236850 HOXB7P09629 217 aa20.04■□□□□ 0.8
APOA1-201ENST00000236850 EIF2S2P20042 333 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms