RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 ATG3Q9NT62 314 aa3.12□□□□□ -1.91
PRKD3-201ENST00000234179 ZNF652Q9Y2D9 606 aa3.12□□□□□ -1.91
PRKD3-201ENST00000234179 ARHGEF1Q92888 912 aaKnown RBP3.12□□□□□ -1.91
PRKD3-201ENST00000234179 TMX4Q9H1E5 349 aaPredicted RBP3.12□□□□□ -1.91
PRKD3-201ENST00000234179 CDHR2Q9BYE9 1310 aa3.12□□□□□ -1.91
PRKD3-201ENST00000234179 ST5P78524 1137 aa3.12□□□□□ -1.91
PRKD3-201ENST00000234179 AKAP4Q5JQC9 854 aa3.12□□□□□ -1.91
PRKD3-201ENST00000234179 RTKN2Q8IZC4 609 aa3.12□□□□□ -1.91
PRKD3-201ENST00000234179 TAOK3Q9H2K8 898 aa3.12□□□□□ -1.91
PRKD3-201ENST00000234179 CNTNAP1P78357 1384 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 SOS1Q07889 1333 aaPredicted RBP3.11□□□□□ -1.91
PRKD3-201ENST00000234179 ST20-MTHFSA0A0A6YYL1 179 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 TM4SF1P30408 202 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 MTHFSP49914 203 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 HSP90AB2PQ58FF8 381 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 HHIPL1Q96JK4 782 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 GGNBP2Q9H3C7 697 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 ITPK1Q13572 414 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 CCDC93Q567U6 631 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 C2CD5Q86YS7 1000 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 EYA1Q99502 592 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 CARMIL3Q8ND23 1372 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 KIF20BQ96Q89 1820 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 A0A0G2JLW4 131 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 TMEM88BA6NKF7 163 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 CLEC4GQ6UXB4 293 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 TTC5Q8N0Z6 440 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 SPDYE1Q8NFV5 336 aaPredicted RBP3.11□□□□□ -1.91
PRKD3-201ENST00000234179 GCC1Q96CN9 775 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 RRAGCQ9HB90 399 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 MAP2P11137 1827 aaKnown RBP3.11□□□□□ -1.91
PRKD3-201ENST00000234179 POLRMTO00411 1230 aaKnown RBP3.11□□□□□ -1.91
PRKD3-201ENST00000234179 MAP2K2P36507 400 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 CRKLP46109 303 aaKnown RBP3.11□□□□□ -1.91
PRKD3-201ENST00000234179 KCPQ6ZWJ8 1503 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 LMOD1P29536 600 aaPredicted RBP3.11□□□□□ -1.91
PRKD3-201ENST00000234179 RGS19P49795 217 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 NEUROD1Q13562 356 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 RRS1Q15050 365 aaKnown RBP3.11□□□□□ -1.91
PRKD3-201ENST00000234179 SUPT20HQ8NEM7 779 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 GAS2L2Q8NHY3 880 aa3.11□□□□□ -1.91
PRKD3-201ENST00000234179 RIC1Q4ADV7 1423 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 TOGARAM1Q9Y4F4 1720 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 SERPINB2P05120 415 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 ALDH1B1P30837 517 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 IL6STP40189 918 aaPredicted RBP3.1□□□□□ -1.91
PRKD3-201ENST00000234179 MASTLQ96GX5 879 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 ASAP1Q9ULH1 1129 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 IBTKQ9P2D0 1353 aaPredicted RBP3.1□□□□□ -1.91
PRKD3-201ENST00000234179 MRC1P22897 1456 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 RNF123Q5XPI4 1314 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 RASSF10A6NK89 507 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 HACL1Q9UJ83 578 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 COL15A1P39059 1388 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 TMC4Q7Z404 712 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 NPR1P16066 1061 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 MLLT1Q03111 559 aaPredicted RBP3.1□□□□□ -1.91
PRKD3-201ENST00000234179 ERFEQ4G0M1 354 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 COL13A1Q5TAT6 717 aaPredicted RBP3.1□□□□□ -1.91
PRKD3-201ENST00000234179 JDP2Q8WYK2 163 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 WBP1LQ9NX94 342 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 ITGB4P16144 1822 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 KIAA1551Q9HCM1 1747 aa3.1□□□□□ -1.91
PRKD3-201ENST00000234179 NPHP1O15259 732 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 EIF6P56537 245 aaKnown RBP3.09□□□□□ -1.91
PRKD3-201ENST00000234179 EIF4A2Q14240 407 aaKnown RBP3.09□□□□□ -1.91
PRKD3-201ENST00000234179 USHBP1Q8N6Y0 703 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 NECTIN2Q92692 538 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 NYXQ9GZU5 481 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 SLC52A2Q9HAB3 445 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 POLKQ9UBT6 870 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 KCNA3P22001 575 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 MMP14P50281 582 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 EIF4G2P78344 907 aaKnown RBP eCLIP3.09□□□□□ -1.91
PRKD3-201ENST00000234179 FKBP4Q02790 459 aaKnown RBP eCLIP3.09□□□□□ -1.91
PRKD3-201ENST00000234179 DDR1Q08345 913 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 DEFB115Q30KQ5 88 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 CNBD1Q8NA66 436 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 COL5A3P25940 1745 aaPredicted RBP3.09□□□□□ -1.91
PRKD3-201ENST00000234179 KCNQ4P56696 695 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 MORC1Q86VD1 984 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 PNISRQ8TF01 805 aaKnown RBP3.09□□□□□ -1.91
PRKD3-201ENST00000234179 SETDB2Q96T68 719 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 CHMP4AQ9BY43 222 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 EMILIN1Q9Y6C2 1016 aa3.09□□□□□ -1.91
PRKD3-201ENST00000234179 HSP90B1P14625 803 aaKnown RBP3.09□□□□□ -1.92
PRKD3-201ENST00000234179 NFIXQ14938 502 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 USP50Q70EL3 339 aaPredicted RBP3.09□□□□□ -1.92
PRKD3-201ENST00000234179 ZC3H15Q8WU90 426 aaKnown RBP3.09□□□□□ -1.92
PRKD3-201ENST00000234179 PSMD1Q99460 953 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 ERBB4Q15303 1308 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 PASKQ96RG2 1323 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 NPC1L1Q9UHC9 1359 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 PPM1GO15355 546 aaPredicted RBP3.09□□□□□ -1.92
PRKD3-201ENST00000234179 NEFMP07197 916 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 CYP19A1P11511 503 aaPredicted RBP3.09□□□□□ -1.92
PRKD3-201ENST00000234179 EIF5P55010 431 aaKnown RBP3.09□□□□□ -1.92
PRKD3-201ENST00000234179 TEFQ10587 303 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 USPL1Q5W0Q7 1092 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 TPTE2Q6XPS3 522 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms