RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 BRINP3Q76B58 766 aa6.84□□□□□ -1.31
TRAPPC13-201ENST00000231526 DZIP1LQ8IYY4 767 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-201ENST00000231526 REPIN1Q9BWE0 567 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-201ENST00000231526 NOB1Q9ULX3 412 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-201ENST00000231526 KIF16BQ96L93 1317 aa6.84□□□□□ -1.31
TRAPPC13-201ENST00000231526 USP54Q70EL1 1684 aa6.84□□□□□ -1.31
TRAPPC13-201ENST00000231526 NFAT5O94916 1531 aa6.84□□□□□ -1.31
TRAPPC13-201ENST00000231526 CARNS1A5YM72 827 aa6.84□□□□□ -1.32
TRAPPC13-201ENST00000231526 GNAT3A8MTJ3 354 aa6.84□□□□□ -1.32
TRAPPC13-201ENST00000231526 VAMP4O75379 141 aa6.84□□□□□ -1.32
TRAPPC13-201ENST00000231526 MS4A1P11836 297 aa6.84□□□□□ -1.32
TRAPPC13-201ENST00000231526 TRIM27P14373 513 aa6.84□□□□□ -1.32
TRAPPC13-201ENST00000231526 ALDH1L2Q3SY69 923 aa6.84□□□□□ -1.32
TRAPPC13-201ENST00000231526 TEX2Q8IWB9 1127 aa6.84□□□□□ -1.32
TRAPPC13-201ENST00000231526 MIS18AQ9NYP9 233 aa6.84□□□□□ -1.32
TRAPPC13-201ENST00000231526 AXIN2Q9Y2T1 843 aa6.84□□□□□ -1.32
TRAPPC13-201ENST00000231526 IPO8O15397 1037 aaKnown RBP6.83□□□□□ -1.32
TRAPPC13-201ENST00000231526 ATF7IPQ6VMQ6 1270 aa6.83□□□□□ -1.32
TRAPPC13-201ENST00000231526 C8orf58Q8NAV2 365 aa6.83□□□□□ -1.32
TRAPPC13-201ENST00000231526 ANKRD24Q8TF21 1146 aa6.83□□□□□ -1.32
TRAPPC13-201ENST00000231526 USP19O94966 1318 aa6.83□□□□□ -1.32
TRAPPC13-201ENST00000231526 FAM161AQ3B820 660 aa6.83□□□□□ -1.32
TRAPPC13-201ENST00000231526 TSPYL4Q9UJ04 414 aa6.83□□□□□ -1.32
TRAPPC13-201ENST00000231526 CHL1O00533 1208 aa6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 KRT24Q2M2I5 525 aa6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 ITPRIPQ8IWB1 547 aa6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 SLC39A7Q92504 469 aa6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 TRPM3Q9HCF6 1732 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 GPR37O15354 613 aa6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 MVPQ14764 893 aaKnown RBP6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 CHRNA2Q15822 529 aa6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 CENPQQ7L2Z9 268 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 CNPY4Q8N129 248 aa6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 SGIP1Q9BQI5 828 aa6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 RBM19Q9Y4C8 960 aaKnown RBP6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 SPATA31A3Q5VYP0 1347 aa6.82□□□□□ -1.32
TRAPPC13-201ENST00000231526 CSB-PGBD3P0DP91 1061 aa6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 C7P10643 843 aa6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 RBM10P98175 930 aaKnown RBP6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 CCDC125Q86Z20 511 aa6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 DDX27Q96GQ7 796 aaKnown RBP6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 XIRP1Q702N8 1843 aaKnown RBP6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 ERBB3P21860 1342 aa6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 TNS3Q68CZ2 1445 aa6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 SLIT3O75094 1523 aa6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 GRXCR2A6NFK2 248 aa6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 HTATSF1O43719 755 aaKnown RBP6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 PRIM1P49642 420 aaKnown RBP6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 PARP9Q8IXQ6 854 aa6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 NLRP2Q9NX02 1062 aa6.81□□□□□ -1.32
TRAPPC13-201ENST00000231526 PLEKHO1Q53GL0 409 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 ZNF530Q6P9A1 599 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 SKAP1Q86WV1 359 aa6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 IL17REQ8NFR9 667 aa6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 DDX19BQ9UMR2 479 aa6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 MAP3K5Q99683 1374 aa6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 RGPD2P0DJD1 1756 aa6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 ALS2Q96Q42 1657 aa6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 KDM2BQ8NHM5 1336 aa6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 AMOTQ4VCS5 1084 aa6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 C1orf141Q5JVX7 400 aa6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 TMEM57Q8N5G2 664 aa6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 MRPL50Q8N5N7 158 aaKnown RBP6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 CRISPLD2Q9H0B8 497 aa6.8□□□□□ -1.32
TRAPPC13-201ENST00000231526 CRB1P82279 1406 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 KIAA0232Q92628 1395 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 TEFQ10587 303 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 TAF7Q15545 349 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 RAPGEF4Q8WZA2 1011 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 PHF12Q96QT6 1004 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 PRDM11Q9NQV5 511 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 PCDHB15Q9Y5E8 787 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 MED1Q15648 1581 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 SOS2Q07890 1332 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 IGHDP01880 384 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 POTEIP0CG38 1075 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 RGS3P49796 1198 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 MPRIPQ6WCQ1 1025 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 PLCD4Q9BRC7 762 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 PXDNQ92626 1479 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 RGPD5Q99666 1765 aa6.79□□□□□ -1.32
TRAPPC13-201ENST00000231526 LGR6Q9HBX8 967 aa6.78□□□□□ -1.32
TRAPPC13-201ENST00000231526 PHRF1Q9P1Y6 1649 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-201ENST00000231526 AKAP4Q5JQC9 854 aa6.78□□□□□ -1.32
TRAPPC13-201ENST00000231526 ARHGAP45Q92619 1136 aa6.78□□□□□ -1.32
TRAPPC13-201ENST00000231526 CCDC102AQ96A19 550 aa6.78□□□□□ -1.32
TRAPPC13-201ENST00000231526 AK7Q96M32 723 aa6.78□□□□□ -1.32
TRAPPC13-201ENST00000231526 STK31Q9BXU1 1019 aa6.78□□□□□ -1.32
TRAPPC13-201ENST00000231526 API5Q9BZZ5 524 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-201ENST00000231526 TATP17735 454 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC13-201ENST00000231526 DSG2Q14126 1118 aa6.77□□□□□ -1.33
TRAPPC13-201ENST00000231526 ZNF467Q7Z7K2 595 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC13-201ENST00000231526 UPF1Q92900 1129 aaKnown RBP eCLIP6.77□□□□□ -1.33
TRAPPC13-201ENST00000231526 RWDD1Q9H446 243 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC13-201ENST00000231526 BTBD11A6QL63 1104 aa6.77□□□□□ -1.33
TRAPPC13-201ENST00000231526 TOM1L2Q6ZVM7 507 aa6.77□□□□□ -1.33
TRAPPC13-201ENST00000231526 DDX12PQ92771 950 aa6.77□□□□□ -1.33
TRAPPC13-201ENST00000231526 CHMP4BQ9H444 224 aaKnown RBP6.76□□□□□ -1.33
TRAPPC13-201ENST00000231526 ZBTB40Q9NUA8 1239 aa6.76□□□□□ -1.33
TRAPPC13-201ENST00000231526 RYDENQ9NUL5 291 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms