RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 PPP1R42Q7Z4L9 355 aa25.67■■□□□ 1.7
CCDC130-201ENST00000221554 KIF1AQ12756 1690 aa25.67■■□□□ 1.7
CCDC130-201ENST00000221554 CAMTA1Q9Y6Y1 1673 aa25.67■■□□□ 1.7
CCDC130-201ENST00000221554 TRIM6-TRIM34B2RNG4 842 aa25.67■■□□□ 1.7
CCDC130-201ENST00000221554 ALDH1L1O75891 902 aa25.67■■□□□ 1.7
CCDC130-201ENST00000221554 CHPF2Q9P2E5 772 aa25.67■■□□□ 1.7
CCDC130-201ENST00000221554 XRCC6P12956 609 aaKnown RBP eCLIP25.66■■□□□ 1.7
CCDC130-201ENST00000221554 CERKQ8TCT0 537 aa25.66■■□□□ 1.7
CCDC130-201ENST00000221554 SURF6O75683 361 aaKnown RBP25.65■■□□□ 1.7
CCDC130-201ENST00000221554 CYP2E1P05181 493 aaPredicted RBP25.65■■□□□ 1.7
CCDC130-201ENST00000221554 SSFA2P28290 1259 aa25.65■■□□□ 1.7
CCDC130-201ENST00000221554 ANKRD24Q8TF21 1146 aa25.65■■□□□ 1.7
CCDC130-201ENST00000221554 ZBTB7CA1YPR0 619 aa25.64■■□□□ 1.7
CCDC130-201ENST00000221554 BAG4O95429 457 aaKnown RBP25.64■■□□□ 1.7
CCDC130-201ENST00000221554 RILPL2Q969X0 211 aa25.64■■□□□ 1.7
CCDC130-201ENST00000221554 HEG1Q9ULI3 1381 aa25.64■■□□□ 1.69
CCDC130-201ENST00000221554 PI4KAP2A4QPH2 592 aa25.64■■□□□ 1.69
CCDC130-201ENST00000221554 PI4KAP1Q8N8J0 262 aa25.64■■□□□ 1.69
CCDC130-201ENST00000221554 RHPN1Q8TCX5 695 aa25.64■■□□□ 1.69
CCDC130-201ENST00000221554 LRRC59Q96AG4 307 aaKnown RBP25.64■■□□□ 1.69
CCDC130-201ENST00000221554 MTX1Q13505 466 aa25.63■■□□□ 1.69
CCDC130-201ENST00000221554 RGPD2P0DJD1 1756 aa25.62■■□□□ 1.69
CCDC130-201ENST00000221554 SRGAP3O43295 1099 aa25.62■■□□□ 1.69
CCDC130-201ENST00000221554 MPRIPQ6WCQ1 1025 aa25.62■■□□□ 1.69
CCDC130-201ENST00000221554 KRT28Q7Z3Y7 464 aa25.62■■□□□ 1.69
CCDC130-201ENST00000221554 ORAI2Q96SN7 254 aa25.62■■□□□ 1.69
CCDC130-201ENST00000221554 PLEKHG2Q9H7P9 1386 aa25.62■■□□□ 1.69
CCDC130-201ENST00000221554 KLHL40Q2TBA0 621 aa25.61■■□□□ 1.69
CCDC130-201ENST00000221554 HYPKQ9NX55 129 aa25.61■■□□□ 1.69
CCDC130-201ENST00000221554 TRPM3Q9HCF6 1732 aaPredicted RBP25.61■■□□□ 1.69
CCDC130-201ENST00000221554 GRPEL1Q9HAV7 217 aa25.61■■□□□ 1.69
CCDC130-201ENST00000221554 GIGYF1O75420 1035 aaPredicted RBP25.6■■□□□ 1.69
CCDC130-201ENST00000221554 C19orf44Q9H6X5 657 aa25.6■■□□□ 1.69
CCDC130-201ENST00000221554 TTC41PQ6P2S7 1318 aa25.6■■□□□ 1.69
CCDC130-201ENST00000221554 USP42Q9H9J4 1324 aaKnown RBP25.6■■□□□ 1.69
CCDC130-201ENST00000221554 NEK4P51957 841 aa25.59■■□□□ 1.69
CCDC130-201ENST00000221554 KSR2Q6VAB6 950 aa25.59■■□□□ 1.69
CCDC130-201ENST00000221554 ERC1Q8IUD2 1116 aa25.59■■□□□ 1.69
CCDC130-201ENST00000221554 INTS4Q96HW7 963 aaKnown RBP25.59■■□□□ 1.69
CCDC130-201ENST00000221554 ANO2Q9NQ90 1003 aa25.59■■□□□ 1.69
CCDC130-201ENST00000221554 DDX58O95786 925 aaKnown RBP25.59■■□□□ 1.69
CCDC130-201ENST00000221554 CNTROBQ8N137 903 aa25.59■■□□□ 1.69
CCDC130-201ENST00000221554 RTN4Q9NQC3 1192 aaKnown RBP25.59■■□□□ 1.69
CCDC130-201ENST00000221554 ADCY9O60503 1353 aa25.58■■□□□ 1.69
CCDC130-201ENST00000221554 KCNQ3O43525 872 aa25.58■■□□□ 1.69
CCDC130-201ENST00000221554 NBPF7P0C2Y1 421 aaPredicted RBP25.58■■□□□ 1.69
CCDC130-201ENST00000221554 ADAMTS7Q9UKP4 1686 aa25.57■■□□□ 1.68
CCDC130-201ENST00000221554 C1orf167Q5SNV9 1468 aa25.57■■□□□ 1.68
CCDC130-201ENST00000221554 TSHZ3Q63HK5 1081 aa25.56■■□□□ 1.68
CCDC130-201ENST00000221554 IL1RAPL2Q9NP60 686 aa25.56■■□□□ 1.68
CCDC130-201ENST00000221554 CUL4AQ13619 759 aa25.56■■□□□ 1.68
CCDC130-201ENST00000221554 DDX49Q9Y6V7 483 aaKnown RBP25.56■■□□□ 1.68
CCDC130-201ENST00000221554 LMOD2Q6P5Q4 547 aa25.55■■□□□ 1.68
CCDC130-201ENST00000221554 PI4K2BQ8TCG2 481 aa25.55■■□□□ 1.68
CCDC130-201ENST00000221554 C9orf78Q9NZ63 289 aaPredicted RBP25.55■■□□□ 1.68
CCDC130-201ENST00000221554 GPATCH3Q96I76 525 aa25.54■■□□□ 1.68
CCDC130-201ENST00000221554 TMX3Q96JJ7 454 aa25.54■■□□□ 1.68
CCDC130-201ENST00000221554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.54■■□□□ 1.68
CCDC130-201ENST00000221554 ABCC6O95255 1503 aa25.54■■□□□ 1.68
CCDC130-201ENST00000221554 GLRX3O76003 335 aaKnown RBP25.54■■□□□ 1.68
CCDC130-201ENST00000221554 NUTM1Q86Y26 1132 aa25.54■■□□□ 1.68
CCDC130-201ENST00000221554 MAP3K2Q9Y2U5 619 aa25.54■■□□□ 1.68
CCDC130-201ENST00000221554 SIPA1L3O60292 1781 aaPredicted RBP25.54■■□□□ 1.68
CCDC130-201ENST00000221554 DCCP43146 1447 aa25.53■■□□□ 1.68
CCDC130-201ENST00000221554 PXDNQ92626 1479 aa25.53■■□□□ 1.68
CCDC130-201ENST00000221554 HSPA4P34932 840 aa25.53■■□□□ 1.68
CCDC130-201ENST00000221554 CLASRPQ8N2M8 674 aaKnown RBP25.53■■□□□ 1.68
CCDC130-201ENST00000221554 LINS1Q8NG48 757 aa25.53■■□□□ 1.68
CCDC130-201ENST00000221554 DDX21Q9NR30 783 aaKnown RBP eCLIP25.53■■□□□ 1.68
CCDC130-201ENST00000221554 ERBB3P21860 1342 aa25.52■■□□□ 1.68
CCDC130-201ENST00000221554 ATF3P18847 181 aa25.51■■□□□ 1.67
CCDC130-201ENST00000221554 OS9Q13438 667 aaPredicted RBP25.51■■□□□ 1.67
CCDC130-201ENST00000221554 RUFY2Q8WXA3 655 aa25.51■■□□□ 1.67
CCDC130-201ENST00000221554 RAPGEF4Q8WZA2 1011 aa25.51■■□□□ 1.67
CCDC130-201ENST00000221554 UTYO14607 1347 aa25.51■■□□□ 1.67
CCDC130-201ENST00000221554 MCTP1Q6DN14 999 aa25.51■■□□□ 1.67
CCDC130-201ENST00000221554 UNC5CLQ8IV45 518 aa25.51■■□□□ 1.67
CCDC130-201ENST00000221554 SPG7Q9UQ90 795 aa25.51■■□□□ 1.67
CCDC130-201ENST00000221554 SGSM2O43147 1006 aa25.5■■□□□ 1.67
CCDC130-201ENST00000221554 XPCQ01831 940 aaPredicted RBP25.5■■□□□ 1.67
CCDC130-201ENST00000221554 KIAA1211Q6ZU35 1233 aa25.5■■□□□ 1.67
CCDC130-201ENST00000221554 ZGPATQ8N5A5 531 aaKnown RBP25.5■■□□□ 1.67
CCDC130-201ENST00000221554 CADPS2Q86UW7 1296 aa25.49■■□□□ 1.67
CCDC130-201ENST00000221554 AXIN2Q9Y2T1 843 aa25.49■■□□□ 1.67
CCDC130-201ENST00000221554 ALS2Q96Q42 1657 aa25.49■■□□□ 1.67
CCDC130-201ENST00000221554 AK9Q5TCS8 1911 aa25.49■■□□□ 1.67
CCDC130-201ENST00000221554 LMBRD1Q9NUN5 540 aa25.49■■□□□ 1.67
CCDC130-201ENST00000221554 RAD50Q92878 1312 aa25.48■■□□□ 1.67
CCDC130-201ENST00000221554 TATP17735 454 aaPredicted RBP25.47■■□□□ 1.67
CCDC130-201ENST00000221554 PALD1Q9ULE6 856 aa25.47■■□□□ 1.67
CCDC130-201ENST00000221554 UBAP1LF5GYI3 381 aa25.46■■□□□ 1.67
CCDC130-201ENST00000221554 ZNF445P59923 1031 aa25.46■■□□□ 1.67
CCDC130-201ENST00000221554 LARP1Q6PKG0 1096 aaKnown RBP25.46■■□□□ 1.67
CCDC130-201ENST00000221554 ECHDC1Q9NTX5 307 aa25.46■■□□□ 1.67
CCDC130-201ENST00000221554 CRYBG1Q9Y4K1 1723 aa25.46■■□□□ 1.67
CCDC130-201ENST00000221554 GRM8O00222 908 aa25.46■■□□□ 1.67
CCDC130-201ENST00000221554 ANXA1P04083 346 aa25.46■■□□□ 1.67
CCDC130-201ENST00000221554 SLC52A2Q9HAB3 445 aa25.46■■□□□ 1.67
CCDC130-201ENST00000221554 SLAIN2Q9P270 581 aa25.46■■□□□ 1.67
CCDC130-201ENST00000221554 ROBO1Q9Y6N7 1651 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms