RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 THUMPD2Q9BTF0 503 aaKnown RBP12.9□□□□□ -0.34
KNOP1-201ENST00000219837 CCDC8Q9H0W5 538 aaPredicted RBP12.9□□□□□ -0.34
KNOP1-201ENST00000219837 NAIPQ13075 1403 aa12.9□□□□□ -0.34
KNOP1-201ENST00000219837 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
KNOP1-201ENST00000219837 C6orf229H3BNL8 230 aa12.9□□□□□ -0.34
KNOP1-201ENST00000219837 CTCFLQ8NI51 663 aaPredicted RBP12.9□□□□□ -0.34
KNOP1-201ENST00000219837 GRPEL1Q9HAV7 217 aa12.9□□□□□ -0.34
KNOP1-201ENST00000219837 A0A087WZG4 1122 aa12.89□□□□□ -0.35
KNOP1-201ENST00000219837 UQCRHLA0A096LP55 91 aa12.89□□□□□ -0.35
KNOP1-201ENST00000219837 GOLGA8AA7E2F4 631 aa12.89□□□□□ -0.35
KNOP1-201ENST00000219837 GOLGA8BA8MQT2 603 aa12.89□□□□□ -0.35
KNOP1-201ENST00000219837 UQCRHP07919 91 aa12.89□□□□□ -0.35
KNOP1-201ENST00000219837 MAP3K11Q16584 847 aa12.89□□□□□ -0.35
KNOP1-201ENST00000219837 AMOTQ4VCS5 1084 aa12.89□□□□□ -0.35
KNOP1-201ENST00000219837 TRMT1LQ7Z2T5 733 aaKnown RBP12.89□□□□□ -0.35
KNOP1-201ENST00000219837 PHAXQ9H814 394 aaKnown RBP12.89□□□□□ -0.35
KNOP1-201ENST00000219837 CATIPQ7Z7H3 387 aa12.89□□□□□ -0.35
KNOP1-201ENST00000219837 LRPPRCP42704 1394 aaKnown RBP12.89□□□□□ -0.35
KNOP1-201ENST00000219837 TIAM1Q13009 1591 aa12.89□□□□□ -0.35
KNOP1-201ENST00000219837 ARHGAP29Q52LW3 1261 aa12.89□□□□□ -0.35
KNOP1-201ENST00000219837 VAT1LQ9HCJ6 419 aa12.89□□□□□ -0.35
KNOP1-201ENST00000219837 TROQ12816 1431 aaPredicted RBP12.88□□□□□ -0.35
KNOP1-201ENST00000219837 MAP2K1Q02750 393 aaPredicted RBP12.88□□□□□ -0.35
KNOP1-201ENST00000219837 RPAP2Q8IXW5 612 aaPredicted RBP12.88□□□□□ -0.35
KNOP1-201ENST00000219837 DYDC1Q8WWB3 177 aa12.88□□□□□ -0.35
KNOP1-201ENST00000219837 FEZ1Q99689 392 aa12.88□□□□□ -0.35
KNOP1-201ENST00000219837 ARHGEF11O15085 1522 aa12.88□□□□□ -0.35
KNOP1-201ENST00000219837 IQCA1Q86XH1 822 aa12.88□□□□□ -0.35
KNOP1-201ENST00000219837 PSMD1Q99460 953 aa12.88□□□□□ -0.35
KNOP1-201ENST00000219837 FILIP1Q7Z7B0 1213 aa12.88□□□□□ -0.35
KNOP1-201ENST00000219837 FGFR1OPO95684 399 aaKnown RBP12.88□□□□□ -0.35
KNOP1-201ENST00000219837 RFC4P35249 363 aa12.88□□□□□ -0.35
KNOP1-201ENST00000219837 DNA2P51530 1060 aa12.88□□□□□ -0.35
KNOP1-201ENST00000219837 NBPF8Q3BBV2 869 aa12.88□□□□□ -0.35
KNOP1-201ENST00000219837 MAP3K2Q9Y2U5 619 aa12.88□□□□□ -0.35
KNOP1-201ENST00000219837 EXOC5O00471 708 aa12.88□□□□□ -0.35
KNOP1-201ENST00000219837 C8orf76Q96K31 380 aa12.88□□□□□ -0.35
KNOP1-201ENST00000219837 CCDC141Q6ZP82 1450 aa12.87□□□□□ -0.35
KNOP1-201ENST00000219837 IFIT3O14879 490 aaKnown RBP12.87□□□□□ -0.35
KNOP1-201ENST00000219837 HMGN5P82970 282 aaKnown RBP12.87□□□□□ -0.35
KNOP1-201ENST00000219837 NME9Q86XW9 330 aa12.87□□□□□ -0.35
KNOP1-201ENST00000219837 NUP88Q99567 741 aaPredicted RBP12.87□□□□□ -0.35
KNOP1-201ENST00000219837 RAB34Q9BZG1 259 aa12.87□□□□□ -0.35
KNOP1-201ENST00000219837 PTPN23Q9H3S7 1636 aa12.87□□□□□ -0.35
KNOP1-201ENST00000219837 CCDC196A0A1B0GTZ2 297 aa12.87□□□□□ -0.35
KNOP1-201ENST00000219837 PLCD3Q8N3E9 789 aa12.87□□□□□ -0.35
KNOP1-201ENST00000219837 HYPKQ9NX55 129 aa12.87□□□□□ -0.35
KNOP1-201ENST00000219837 BCCIPQ9P287 314 aaKnown RBP eCLIP12.87□□□□□ -0.35
KNOP1-201ENST00000219837 SAMM50Q9Y512 469 aa12.87□□□□□ -0.35
KNOP1-201ENST00000219837 SYCE3A1L190 88 aa12.86□□□□□ -0.35
KNOP1-201ENST00000219837 GLRX3O76003 335 aaKnown RBP12.86□□□□□ -0.35
KNOP1-201ENST00000219837 CCT2P78371 535 aaKnown RBP12.86□□□□□ -0.35
KNOP1-201ENST00000219837 CAMSAP2Q08AD1 1489 aa12.86□□□□□ -0.35
KNOP1-201ENST00000219837 GRM1Q13255 1194 aa12.86□□□□□ -0.35
KNOP1-201ENST00000219837 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
KNOP1-201ENST00000219837 KAT14Q9H8E8 782 aa12.86□□□□□ -0.35
KNOP1-201ENST00000219837 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
KNOP1-201ENST00000219837 ZBTB3Q9H5J0 574 aa12.86□□□□□ -0.35
KNOP1-201ENST00000219837 COMMD10Q9Y6G5 202 aa12.86□□□□□ -0.35
KNOP1-201ENST00000219837 F6X3S4 739 aa12.86□□□□□ -0.35
KNOP1-201ENST00000219837 MYO1BO43795 1136 aa12.86□□□□□ -0.35
KNOP1-201ENST00000219837 MPHOSPH6Q99547 160 aaKnown RBP12.86□□□□□ -0.35
KNOP1-201ENST00000219837 RNF41Q9H4P4 317 aaPredicted RBP12.86□□□□□ -0.35
KNOP1-201ENST00000219837 MMRN2Q9H8L6 949 aa12.86□□□□□ -0.35
KNOP1-201ENST00000219837 BRPF3Q9ULD4 1205 aa12.86□□□□□ -0.35
KNOP1-201ENST00000219837 CTNNA2P26232 953 aa12.85□□□□□ -0.35
KNOP1-201ENST00000219837 VPS36Q86VN1 386 aa12.85□□□□□ -0.35
KNOP1-201ENST00000219837 BICD1Q96G01 975 aa12.85□□□□□ -0.35
KNOP1-201ENST00000219837 HMGB1P09429 215 aaKnown RBP12.85□□□□□ -0.35
KNOP1-201ENST00000219837 KRT28Q7Z3Y7 464 aa12.85□□□□□ -0.35
KNOP1-201ENST00000219837 FERMT3Q86UX7 667 aa12.85□□□□□ -0.35
KNOP1-201ENST00000219837 CALML4Q96GE6 196 aa12.85□□□□□ -0.35
KNOP1-201ENST00000219837 PUF60Q9UHX1 559 aaKnown RBP12.85□□□□□ -0.35
KNOP1-201ENST00000219837 TOPBP1Q92547 1522 aa12.85□□□□□ -0.35
KNOP1-201ENST00000219837 SPTY2D1Q68D10 685 aaPredicted RBP12.85□□□□□ -0.35
KNOP1-201ENST00000219837 SYCP3Q8IZU3 236 aa12.85□□□□□ -0.35
KNOP1-201ENST00000219837 CABP5Q9NP86 173 aa12.85□□□□□ -0.35
KNOP1-201ENST00000219837 PRKCSHP14314 528 aaPredicted RBP12.85□□□□□ -0.35
KNOP1-201ENST00000219837 STAMBPO95630 424 aa12.85□□□□□ -0.35
KNOP1-201ENST00000219837 TTF1Q15361 905 aaPredicted RBP12.84□□□□□ -0.35
KNOP1-201ENST00000219837 MACROD2A1Z1Q3 448 aa12.84□□□□□ -0.35
KNOP1-201ENST00000219837 LARP6Q9BRS8 491 aaKnown RBP12.84□□□□□ -0.35
KNOP1-201ENST00000219837 CD109Q6YHK3 1445 aa12.84□□□□□ -0.35
KNOP1-201ENST00000219837 POLA1P09884 1462 aaPredicted RBP12.84□□□□□ -0.35
KNOP1-201ENST00000219837 KIF5CO60282 957 aa12.84□□□□□ -0.35
KNOP1-201ENST00000219837 HLA-DOAP06340 250 aa12.84□□□□□ -0.35
KNOP1-201ENST00000219837 HOMER2Q9NSB8 354 aa12.84□□□□□ -0.35
KNOP1-201ENST00000219837 TOP2BQ02880 1626 aa12.84□□□□□ -0.35
KNOP1-201ENST00000219837 CNNM3Q8NE01 707 aa12.84□□□□□ -0.35
KNOP1-201ENST00000219837 SLFN5Q08AF3 891 aa12.84□□□□□ -0.35
KNOP1-201ENST00000219837 IFFO1Q0D2I5 559 aa12.84□□□□□ -0.35
KNOP1-201ENST00000219837 PPP1R42Q7Z4L9 355 aa12.84□□□□□ -0.35
KNOP1-201ENST00000219837 DNAAF4Q8WXU2 420 aa12.84□□□□□ -0.35
KNOP1-201ENST00000219837 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
KNOP1-201ENST00000219837 GSTTP1A0A1W2PQM5 241 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 TTC16Q8NEE8 873 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 VTI1AQ96AJ9 217 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 ANO10Q9NW15 660 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 CWC25Q9NXE8 425 aaPredicted RBP12.83□□□□□ -0.36
KNOP1-201ENST00000219837 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms