RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 UNC5CLQ8IV45 518 aa21.18■□□□□ 0.98
CHGA-201ENST00000216492 SMC5Q8IY18 1101 aa21.17■□□□□ 0.98
CHGA-201ENST00000216492 SPATA31A5Q5VU36 1347 aa21.17■□□□□ 0.98
CHGA-201ENST00000216492 SPATA31A6Q5VVP1 1343 aa21.17■□□□□ 0.98
CHGA-201ENST00000216492 SPATA31A7Q8IWB4 1347 aa21.17■□□□□ 0.98
CHGA-201ENST00000216492 SLIT2O94813 1529 aa21.17■□□□□ 0.98
CHGA-201ENST00000216492 ANXA1P04083 346 aa21.17■□□□□ 0.98
CHGA-201ENST00000216492 TBC1D32Q96NH3 1257 aa21.17■□□□□ 0.98
CHGA-201ENST00000216492 HSPA1LP34931 641 aa21.16■□□□□ 0.98
CHGA-201ENST00000216492 C1orf115Q9H7X2 142 aa21.15■□□□□ 0.98
CHGA-201ENST00000216492 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
CHGA-201ENST00000216492 USP16Q9Y5T5 823 aa21.15■□□□□ 0.98
CHGA-201ENST00000216492 DDX21Q9NR30 783 aaKnown RBP eCLIP21.14■□□□□ 0.98
CHGA-201ENST00000216492 HYPKQ9NX55 129 aa21.14■□□□□ 0.98
CHGA-201ENST00000216492 DDB1Q16531 1140 aa21.14■□□□□ 0.97
CHGA-201ENST00000216492 FNBP4Q8N3X1 1017 aaPredicted RBP21.14■□□□□ 0.97
CHGA-201ENST00000216492 PLCH1Q4KWH8 1693 aa21.14■□□□□ 0.97
CHGA-201ENST00000216492 PDIA6Q15084 440 aa21.13■□□□□ 0.97
CHGA-201ENST00000216492 PROSER3Q2NL68 480 aa21.13■□□□□ 0.97
CHGA-201ENST00000216492 BARGINQ6ZT62 677 aa21.13■□□□□ 0.97
CHGA-201ENST00000216492 PI4KAP2A4QPH2 592 aa21.12■□□□□ 0.97
CHGA-201ENST00000216492 PRKCSHP14314 528 aaPredicted RBP21.12■□□□□ 0.97
CHGA-201ENST00000216492 PI4KAP1Q8N8J0 262 aa21.12■□□□□ 0.97
CHGA-201ENST00000216492 PIGBQ92521 554 aa21.12■□□□□ 0.97
CHGA-201ENST00000216492 MEIS3Q99687 375 aa21.12■□□□□ 0.97
CHGA-201ENST00000216492 PTCD1O75127 700 aaKnown RBP21.11■□□□□ 0.97
CHGA-201ENST00000216492 VPS72Q15906 364 aa21.11■□□□□ 0.97
CHGA-201ENST00000216492 SHANK3Q9BYB0 1731 aa21.1■□□□□ 0.97
CHGA-201ENST00000216492 CACNA1FO60840 1977 aa21.1■□□□□ 0.97
CHGA-201ENST00000216492 NUCB1Q02818 461 aa21.09■□□□□ 0.97
CHGA-201ENST00000216492 DNAAF4Q8WXU2 420 aa21.09■□□□□ 0.97
CHGA-201ENST00000216492 BCL9LQ86UU0 1499 aa21.09■□□□□ 0.97
CHGA-201ENST00000216492 MYL6BP14649 208 aa21.09■□□□□ 0.97
CHGA-201ENST00000216492 SIRT2Q8IXJ6 389 aa21.09■□□□□ 0.97
CHGA-201ENST00000216492 USP21Q9UK80 565 aa21.09■□□□□ 0.97
CHGA-201ENST00000216492 NRAPQ86VF7 1730 aa21.09■□□□□ 0.97
CHGA-201ENST00000216492 TNS2Q63HR2 1409 aa21.08■□□□□ 0.96
CHGA-201ENST00000216492 AIMP1Q12904 312 aaKnown RBP21.08■□□□□ 0.96
CHGA-201ENST00000216492 GSE1Q14687 1217 aa21.08■□□□□ 0.96
CHGA-201ENST00000216492 KSR2Q6VAB6 950 aa21.08■□□□□ 0.96
CHGA-201ENST00000216492 ASAP1Q9ULH1 1129 aa21.08■□□□□ 0.96
CHGA-201ENST00000216492 NWD2Q9ULI1 1742 aa21.07■□□□□ 0.96
CHGA-201ENST00000216492 FAM98CQ17RN3 349 aaKnown RBP21.07■□□□□ 0.96
CHGA-201ENST00000216492 MEX3CQ5U5Q3 659 aaKnown RBP21.07■□□□□ 0.96
CHGA-201ENST00000216492 SYTL4Q96C24 671 aaPredicted RBP21.07■□□□□ 0.96
CHGA-201ENST00000216492 GCC1Q96CN9 775 aa21.07■□□□□ 0.96
CHGA-201ENST00000216492 SRCIN1Q9C0H9 1055 aa21.07■□□□□ 0.96
CHGA-201ENST00000216492 DDX58O95786 925 aaKnown RBP21.06■□□□□ 0.96
CHGA-201ENST00000216492 RPAP2Q8IXW5 612 aaPredicted RBP21.06■□□□□ 0.96
CHGA-201ENST00000216492 GNAI3P08754 354 aa21.06■□□□□ 0.96
CHGA-201ENST00000216492 PRIM1P49642 420 aaKnown RBP21.06■□□□□ 0.96
CHGA-201ENST00000216492 BEND3Q5T5X7 828 aa21.06■□□□□ 0.96
CHGA-201ENST00000216492 MARCH10Q8NA82 808 aaPredicted RBP21.06■□□□□ 0.96
CHGA-201ENST00000216492 ATG3Q9NT62 314 aa21.06■□□□□ 0.96
CHGA-201ENST00000216492 MAP3K2Q9Y2U5 619 aa21.06■□□□□ 0.96
CHGA-201ENST00000216492 CHD1LQ86WJ1 897 aa21.05■□□□□ 0.96
CHGA-201ENST00000216492 C22orf23Q9BZE7 217 aa21.05■□□□□ 0.96
CHGA-201ENST00000216492 LRP6O75581 1613 aa21.05■□□□□ 0.96
CHGA-201ENST00000216492 ADCY9O60503 1353 aa21.05■□□□□ 0.96
CHGA-201ENST00000216492 COPS6Q7L5N1 327 aa21.05■□□□□ 0.96
CHGA-201ENST00000216492 USP44Q9H0E7 712 aa21.05■□□□□ 0.96
CHGA-201ENST00000216492 FRAT2O75474 233 aaPredicted RBP21.04■□□□□ 0.96
CHGA-201ENST00000216492 GNAI2P04899 355 aa21.04■□□□□ 0.96
CHGA-201ENST00000216492 PIP4K2AP48426 406 aaPredicted RBP21.04■□□□□ 0.96
CHGA-201ENST00000216492 ANKRD44Q8N8A2 993 aa21.04■□□□□ 0.96
CHGA-201ENST00000216492 MFAP1P55081 439 aaKnown RBP21.03■□□□□ 0.96
CHGA-201ENST00000216492 CEP85Q6P2H3 762 aa21.03■□□□□ 0.96
CHGA-201ENST00000216492 LRP10Q7Z4F1 713 aa21.03■□□□□ 0.96
CHGA-201ENST00000216492 XAGE3Q8WTP9 111 aa21.03■□□□□ 0.96
CHGA-201ENST00000216492 PXDNLA1KZ92 1463 aa21.03■□□□□ 0.96
CHGA-201ENST00000216492 BCL9O00512 1426 aa21.02■□□□□ 0.96
CHGA-201ENST00000216492 RIC3Q7Z5B4 369 aa21.02■□□□□ 0.96
CHGA-201ENST00000216492 LNPKQ9C0E8 428 aa21.02■□□□□ 0.96
CHGA-201ENST00000216492 VSIG10Q8N0Z9 540 aa21.01■□□□□ 0.95
CHGA-201ENST00000216492 RBM42Q9BTD8 480 aaKnown RBP21.01■□□□□ 0.95
CHGA-201ENST00000216492 TBC1D2Q9BYX2 928 aa21.01■□□□□ 0.95
CHGA-201ENST00000216492 ERBB4Q15303 1308 aa21.01■□□□□ 0.95
CHGA-201ENST00000216492 A1BGP04217 495 aa21.01■□□□□ 0.95
CHGA-201ENST00000216492 ANKRD13DQ6ZTN6 518 aa21.01■□□□□ 0.95
CHGA-201ENST00000216492 TEX13AQ9BXU3 409 aaPredicted RBP21.01■□□□□ 0.95
CHGA-201ENST00000216492 KCPQ6ZWJ8 1503 aa21.01■□□□□ 0.95
CHGA-201ENST00000216492 UBTFL1P0CB47 393 aaPredicted RBP21■□□□□ 0.95
CHGA-201ENST00000216492 NBPF26B4DH59 902 aa21■□□□□ 0.95
CHGA-201ENST00000216492 NBPF14Q5TI25 921 aa21■□□□□ 0.95
CHGA-201ENST00000216492 NBPF10Q6P3W6 841 aaKnown RBP21■□□□□ 0.95
CHGA-201ENST00000216492 NBPF15Q8N660 670 aa21■□□□□ 0.95
CHGA-201ENST00000216492 ACSBG1Q96GR2 724 aa21■□□□□ 0.95
CHGA-201ENST00000216492 SLKQ9H2G2 1235 aaPredicted RBP21■□□□□ 0.95
CHGA-201ENST00000216492 TOGARAM1Q9Y4F4 1720 aa21■□□□□ 0.95
CHGA-201ENST00000216492 C5P01031 1676 aa20.99■□□□□ 0.95
CHGA-201ENST00000216492 BMP2KLQ5H9B9 411 aa20.99■□□□□ 0.95
CHGA-201ENST00000216492 ATP10DQ9P241 1426 aa20.99■□□□□ 0.95
CHGA-201ENST00000216492 A0A0G2JS52 829 aa20.98■□□□□ 0.95
CHGA-201ENST00000216492 ALDH1L1O75891 902 aa20.98■□□□□ 0.95
CHGA-201ENST00000216492 ANKRD45Q5TZF3 282 aa20.98■□□□□ 0.95
CHGA-201ENST00000216492 LINS1Q8NG48 757 aa20.98■□□□□ 0.95
CHGA-201ENST00000216492 DCTPP1Q9H773 170 aa20.98■□□□□ 0.95
CHGA-201ENST00000216492 AFF2P51816 1311 aa20.97■□□□□ 0.95
CHGA-201ENST00000216492 HMMRO75330 724 aa20.97■□□□□ 0.95
CHGA-201ENST00000216492 NBPF7P0C2Y1 421 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms