RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 CCDC69A6NI79 296 aa5.06□□□□□ -1.6
CFTR-201ENST00000003084 RBM5P52756 815 aaKnown RBP eCLIP5.06□□□□□ -1.6
CFTR-201ENST00000003084 PPP1R15BQ5SWA1 713 aa5.06□□□□□ -1.6
CFTR-201ENST00000003084 PPP1R42Q7Z4L9 355 aa5.06□□□□□ -1.6
CFTR-201ENST00000003084 AACSQ86V21 672 aa5.06□□□□□ -1.6
CFTR-201ENST00000003084 LRRC59Q96AG4 307 aaKnown RBP5.06□□□□□ -1.6
CFTR-201ENST00000003084 LMTK3Q96Q04 1460 aa5.06□□□□□ -1.6
CFTR-201ENST00000003084 NCKAP5LQ9HCH0 1330 aa5.06□□□□□ -1.6
CFTR-201ENST00000003084 MYO5CQ9NQX4 1742 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 IFIT1P09914 478 aaKnown RBP5.05□□□□□ -1.6
CFTR-201ENST00000003084 SLC5A1P13866 664 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 ST5P78524 1137 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 CCDC73Q6ZRK6 1079 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 NKTRP30414 1462 aaKnown RBP5.05□□□□□ -1.6
CFTR-201ENST00000003084 CDKL5O76039 1030 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 PDCP20941 246 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 KRT32Q14532 448 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 DBF4Q9UBU7 674 aaPredicted RBP5.05□□□□□ -1.6
CFTR-201ENST00000003084 PDZRN3Q9UPQ7 1066 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 PCDHB9Q9Y5E1 797 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 MAGI2Q86UL8 1455 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 ANKRD18BA2A2Z9 1011 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 TTC24A2A3L6 582 aaPredicted RBP5.05□□□□□ -1.6
CFTR-201ENST00000003084 PES1O00541 588 aaKnown RBP5.05□□□□□ -1.6
CFTR-201ENST00000003084 FOXD4L5Q5VV16 416 aaPredicted RBP5.05□□□□□ -1.6
CFTR-201ENST00000003084 FOXD4L4Q8WXT5 416 aaPredicted RBP5.05□□□□□ -1.6
CFTR-201ENST00000003084 ANKK1Q8NFD2 765 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 ZCRB1Q8TBF4 217 aaKnown RBP5.05□□□□□ -1.6
CFTR-201ENST00000003084 BICD2Q8TD16 824 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 MYD88Q99836 296 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 RSPH6AQ9H0K4 717 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 EMILIN1Q9Y6C2 1016 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 DISP3Q9P2K9 1392 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 SRGAP3O43295 1099 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 TXLNAP40222 546 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 WASF1Q92558 559 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 CDCA7LQ96GN5 454 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 NAT10Q9H0A0 1025 aaKnown RBP5.05□□□□□ -1.6
CFTR-201ENST00000003084 RAI14Q9P0K7 980 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 DDX49Q9Y6V7 483 aaKnown RBP5.05□□□□□ -1.6
CFTR-201ENST00000003084 ABCA8O94911 1581 aa5.05□□□□□ -1.6
CFTR-201ENST00000003084 WDHD1O75717 1129 aaPredicted RBP5.04□□□□□ -1.6
CFTR-201ENST00000003084 SNRPA1P09661 255 aaKnown RBP5.04□□□□□ -1.6
CFTR-201ENST00000003084 METTL24Q5JXM2 366 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 OLFM4Q6UX06 510 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 MPRIPQ6WCQ1 1025 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 MCM10Q7L590 875 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 CYP46A1Q9Y6A2 500 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 PIK3R4Q99570 1358 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 YTHDC2Q9H6S0 1430 aaKnown RBP5.04□□□□□ -1.6
CFTR-201ENST00000003084 KCNA6P17658 529 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 CCDC70Q6NSX1 233 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 TRIM22Q8IYM9 498 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 KIF1BPQ96EK5 621 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 ZSCAN31Q96LW9 406 aaPredicted RBP5.04□□□□□ -1.6
CFTR-201ENST00000003084 GZF1Q9H116 711 aaPredicted RBP5.04□□□□□ -1.6
CFTR-201ENST00000003084 SEMA3FQ13275 785 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 AKAP4Q5JQC9 854 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 SOGA3Q5TF21 947 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 SASS6Q6UVJ0 657 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 CHD1LQ86WJ1 897 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 USHBP1Q8N6Y0 703 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 VPS37CA5D8V6 355 aaPredicted RBP5.04□□□□□ -1.6
CFTR-201ENST00000003084 C11orf95C9JLR9 678 aaPredicted RBP5.04□□□□□ -1.6
CFTR-201ENST00000003084 PCSK2P16519 638 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 PIP4K2AP48426 406 aaPredicted RBP5.04□□□□□ -1.6
CFTR-201ENST00000003084 IFIT5Q13325 482 aaKnown RBP5.04□□□□□ -1.6
CFTR-201ENST00000003084 DNAAF4Q8WXU2 420 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 CDK5RAP3Q96JB5 506 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 CDC5LQ99459 802 aaKnown RBP5.04□□□□□ -1.6
CFTR-201ENST00000003084 SIL1Q9H173 461 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 PTPRKQ15262 1439 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 SOS1Q07889 1333 aaPredicted RBP5.04□□□□□ -1.6
CFTR-201ENST00000003084 ABL1P00519 1130 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 AXDND1Q5T1B0 1012 aaPredicted RBP5.04□□□□□ -1.6
CFTR-201ENST00000003084 C1orf115Q9H7X2 142 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 LRP2BPQ9P2M1 347 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 WASF2Q9Y6W5 498 aa5.04□□□□□ -1.6
CFTR-201ENST00000003084 NPATQ14207 1427 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 IPO7O95373 1038 aaKnown RBP5.03□□□□□ -1.6
CFTR-201ENST00000003084 SIRT1Q96EB6 747 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 TRMT112Q9UI30 125 aaKnown RBP5.03□□□□□ -1.6
CFTR-201ENST00000003084 BOLA1Q9Y3E2 137 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 FLT4P35916 1363 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 BCAR3O75815 825 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 RFC4P35249 363 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 TTF1Q15361 905 aaPredicted RBP5.03□□□□□ -1.6
CFTR-201ENST00000003084 JMYQ8N9B5 988 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 SSU72Q9NP77 194 aaKnown RBP5.03□□□□□ -1.6
CFTR-201ENST00000003084 CWC25Q9NXE8 425 aaPredicted RBP5.03□□□□□ -1.6
CFTR-201ENST00000003084 NOL7Q9UMY1 257 aaKnown RBP5.03□□□□□ -1.6
CFTR-201ENST00000003084 FAM205CA6NFA0 338 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 IL2RBP14784 551 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 TDO2P48775 406 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 RRP12Q5JTH9 1297 aaKnown RBP5.03□□□□□ -1.6
CFTR-201ENST00000003084 SPTY2D1Q68D10 685 aaPredicted RBP5.03□□□□□ -1.6
CFTR-201ENST00000003084 PLPP6Q8IY26 295 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 ANKIB1Q9P2G1 1089 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 ARHGEF10O15013 1369 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 KDM5DQ9BY66 1539 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms