RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Elp1Q7TT37 1333 aaKnown RBP31.96■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Tiam2Q6ZPF3 1715 aa31.96■■■□□ 2.71
Tpm1-216ENSMUST00000113707 PappaQ8R4K8 1624 aa31.95■■■□□ 2.71
Tpm1-216ENSMUST00000113707 ChgaP26339 463 aaKnown RBP31.95■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Atg4a-psA0A0G2JFS9 396 aa31.95■■■□□ 2.7
Tpm1-216ENSMUST00000113707 Atg4aQ8C9S8 396 aa31.95■■■□□ 2.7
Tpm1-216ENSMUST00000113707 CanxP35564 591 aaKnown RBP31.94■■■□□ 2.7
Tpm1-216ENSMUST00000113707 Bicc1Q99MQ1 977 aaKnown RBP31.92■■■□□ 2.7
Tpm1-216ENSMUST00000113707 Ier5O89113 308 aa31.91■■■□□ 2.7
Tpm1-216ENSMUST00000113707 Mum1Q6DID5 682 aa31.9■■■□□ 2.7
Tpm1-216ENSMUST00000113707 Dnai1Q8C0M8 701 aa31.9■■■□□ 2.7
Tpm1-216ENSMUST00000113707 Cyp46a1Q9WVK8 500 aa31.9■■■□□ 2.7
Tpm1-216ENSMUST00000113707 Mfap1aC0HKD8 439 aaKnown RBP31.89■■■□□ 2.7
Tpm1-216ENSMUST00000113707 Mfap1bC0HKD9 439 aaKnown RBP31.89■■■□□ 2.7
Tpm1-216ENSMUST00000113707 Mcmdc2E9Q956 681 aa31.89■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Igfbp6P47880 238 aa31.89■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Tceal9Q9DD24 104 aa31.88■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Crb1Q8VHS2 1405 aa31.88■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Erbb4Q61527 1308 aa31.87■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Hoxa7P02830 229 aa31.87■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Ppm1mQ8BU27 406 aa31.87■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Eif2s2Q99L45 331 aaKnown RBP31.87■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Map3k13Q1HKZ5 959 aa31.86■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Ddx60E9PZQ1 1711 aa31.86■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Tlr7P58681 1050 aa31.86■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Ankle2Q6P1H6 964 aa31.86■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Ginm1Q91WR6 327 aa31.86■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Slc39a6Q8C145 765 aa31.85■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Trim52Q8CDV4 233 aa31.85■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Shank2Q80Z38 1476 aa31.85■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Sik1Q60670 779 aa31.84■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Ttll7A4Q9F0 912 aa31.84■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Ccnl1Q52KE7 532 aaKnown RBP31.84■■■□□ 2.69
Tpm1-216ENSMUST00000113707 CenppQ9CZ92 286 aa31.84■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Cers3Q1A3B0 383 aa31.83■■■□□ 2.69
Tpm1-216ENSMUST00000113707 ApobrQ8VBT6 942 aa31.83■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Nek4Q9Z1J2 792 aa31.83■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Rabep1O35551 862 aa31.82■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Grm8P47743 908 aa31.82■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Tbc1d9Q3UYK3 1264 aa31.82■■■□□ 2.69
Tpm1-216ENSMUST00000113707 Mst1rQ62190 1378 aa31.82■■■□□ 2.68
Tpm1-216ENSMUST00000113707 Kat6bQ8BRB7 1872 aa31.82■■■□□ 2.68
Tpm1-216ENSMUST00000113707 Shank3Q4ACU6 1730 aa31.82■■■□□ 2.68
Tpm1-216ENSMUST00000113707 Hspa1lP16627 641 aa31.8■■■□□ 2.68
Tpm1-216ENSMUST00000113707 Ppp1r9bQ6R891 817 aaKnown RBP31.8■■■□□ 2.68
Tpm1-216ENSMUST00000113707 Slc4a10Q5DTL9 1118 aa31.79■■■□□ 2.68
Tpm1-216ENSMUST00000113707 Lmbr1lQ9D1E5 489 aa31.79■■■□□ 2.68
Tpm1-216ENSMUST00000113707 Anapc15-psA0A140T8L6 141 aa31.78■■■□□ 2.68
Tpm1-216ENSMUST00000113707 Mylk2Q8VCR8 613 aa31.78■■■□□ 2.68
Tpm1-216ENSMUST00000113707 Exoc5Q3TPX4 708 aa31.77■■■□□ 2.68
Tpm1-216ENSMUST00000113707 MypnQ5DTJ9 1315 aa31.77■■■□□ 2.68
Tpm1-216ENSMUST00000113707 Ddx58Q6Q899 926 aa31.76■■■□□ 2.68
Tpm1-216ENSMUST00000113707 Smg7Q5RJH6 1138 aaKnown RBP31.76■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Tgfb1i1Q62219 461 aa31.76■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Pm20d1Q8C165 503 aa31.76■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Bcar3Q9QZK2 820 aa31.76■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Zkscan2G3X952 960 aa31.75■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Slc5a4bQ91ZP4 660 aa31.75■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Lrp6O88572 1613 aa31.75■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Ccdc129Q14B48 1034 aa31.74■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Zbtb40Q6PCS8 1258 aa31.74■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Ankrd23Q812A3 306 aa31.73■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Cap2Q9CYT6 476 aa31.73■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Cct4P80315 539 aaKnown RBP31.72■■■□□ 2.67
Tpm1-216ENSMUST00000113707 VgfQ0VGU4 617 aa31.72■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Ptpdc1Q6NZK8 747 aa31.72■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Hdac6Q9Z2V5 1149 aa31.72■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Sptbn5F6UCX4 1208 aa31.71■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Hspa2P17156 633 aa31.71■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Gm12185Q5NCB2 835 aa31.71■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Fer1l6E0CZ42 1862 aa31.71■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Ripor2Q80U16 1078 aa31.7■■■□□ 2.67
Tpm1-216ENSMUST00000113707 Pdia3P27773 505 aaKnown RBP31.69■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Syde2E9PUP1 1314 aa31.69■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Col4a1P02463 1669 aa31.69■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Vps33bP59016 617 aa31.68■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Ggt6Q6PDE7 497 aa31.67■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Nav1Q8CH77 1875 aa31.67■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Kif2cQ922S8 721 aa31.67■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Fkbp5Q64378 456 aa31.67■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Myt1Q8CFC2 1127 aa31.67■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Mast2Q60592 1734 aa31.66■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Kiaa0232Q80U59 1396 aaKnown RBP31.66■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Nucb1Q02819 459 aaKnown RBP31.65■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Ppp6r3Q922D4 844 aa31.65■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Abcc4E9Q236 1325 aa31.65■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Nlrp9bQ66X22 1003 aa31.65■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Psrc1Q9D0P7 329 aa31.65■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Nwd2Q6P5U7 1742 aa31.64■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Hmox1P14901 289 aa31.64■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Tnpo1Q8BFY9 898 aaKnown RBP31.64■■■□□ 2.66
Tpm1-216ENSMUST00000113707 Soga3Q6NZL0 945 aa31.63■■■□□ 2.65
Tpm1-216ENSMUST00000113707 Jmjd4Q8BFT6 427 aa31.63■■■□□ 2.65
Tpm1-216ENSMUST00000113707 Pa2g4P50580 394 aaKnown RBP31.62■■■□□ 2.65
Tpm1-216ENSMUST00000113707 Noc3lQ8VI84 807 aaKnown RBP31.62■■■□□ 2.65
Tpm1-216ENSMUST00000113707 Q9D2X8 372 aa31.62■■■□□ 2.65
Tpm1-216ENSMUST00000113707 InsrrQ9WTL4 1300 aa31.62■■■□□ 2.65
Tpm1-216ENSMUST00000113707 NmiO35309 314 aa31.61■■■□□ 2.65
Tpm1-216ENSMUST00000113707 Ddb1Q3U1J4 1140 aaKnown RBP31.61■■■□□ 2.65
Tpm1-216ENSMUST00000113707 Dcaf5Q80T85 946 aa31.61■■■□□ 2.65
Retrieved 100 of 22,080 RNA–protein pairs in 78.2 ms