RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Dlg5E9Q9R9 1921 aa15.6■□□□□ 0.09
Nup88-203ENSMUST00000108531 Erbb4Q61527 1308 aa15.6■□□□□ 0.09
Nup88-203ENSMUST00000108531 Tmem132eQ6IEE6 982 aa15.59■□□□□ 0.09
Nup88-203ENSMUST00000108531 Brpf1B2RRD7 1212 aa15.59■□□□□ 0.09
Nup88-203ENSMUST00000108531 Pank2Q3U4S0 443 aa15.58■□□□□ 0.09
Nup88-203ENSMUST00000108531 Tex2Q6ZPJ0 1128 aaKnown RBP15.58■□□□□ 0.09
Nup88-203ENSMUST00000108531 E4f1Q8CCE9 783 aa15.58■□□□□ 0.09
Nup88-203ENSMUST00000108531 Amotl1Q9D4H4 968 aa15.58■□□□□ 0.09
Nup88-203ENSMUST00000108531 Alpk3Q924C5 1678 aa15.58■□□□□ 0.09
Nup88-203ENSMUST00000108531 Slc4a10Q5DTL9 1118 aa15.58■□□□□ 0.08
Nup88-203ENSMUST00000108531 Ccar2Q8VDP4 922 aaKnown RBP15.58■□□□□ 0.08
Nup88-203ENSMUST00000108531 Tlr7P58681 1050 aa15.57■□□□□ 0.08
Nup88-203ENSMUST00000108531 Gjb2Q00977 226 aa15.57■□□□□ 0.08
Nup88-203ENSMUST00000108531 Eif4a1P60843 406 aaKnown RBP15.57■□□□□ 0.08
Nup88-203ENSMUST00000108531 Gse1Q3U3C9 1213 aa15.57■□□□□ 0.08
Nup88-203ENSMUST00000108531 Bend3Q6PAL0 825 aa15.57■□□□□ 0.08
Nup88-203ENSMUST00000108531 Safb2Q80YR5 991 aaKnown RBP15.57■□□□□ 0.08
Nup88-203ENSMUST00000108531 Echdc1Q9D9V3 322 aa15.57■□□□□ 0.08
Nup88-203ENSMUST00000108531 Stk3Q9JI10 497 aa15.57■□□□□ 0.08
Nup88-203ENSMUST00000108531 Zap70P43404 618 aa15.56■□□□□ 0.08
Nup88-203ENSMUST00000108531 Dnajc5gQ8C632 165 aa15.56■□□□□ 0.08
Nup88-203ENSMUST00000108531 Pnma3Q8JZW8 466 aa15.56■□□□□ 0.08
Nup88-203ENSMUST00000108531 Chd1lQ9CXF7 900 aa15.56■□□□□ 0.08
Nup88-203ENSMUST00000108531 Irx6Q9ER75 438 aa15.56■□□□□ 0.08
Nup88-203ENSMUST00000108531 Kdm6aO70546 1401 aa15.56■□□□□ 0.08
Nup88-203ENSMUST00000108531 Abcc12Q80WJ6 1366 aa15.56■□□□□ 0.08
Nup88-203ENSMUST00000108531 Fyb1O35601 819 aa15.56■□□□□ 0.08
Nup88-203ENSMUST00000108531 Pdia4P08003 638 aaKnown RBP15.56■□□□□ 0.08
Nup88-203ENSMUST00000108531 Mknk2Q8CDB0 459 aa15.56■□□□□ 0.08
Nup88-203ENSMUST00000108531 Ccdc173A0JLY1 547 aa15.55■□□□□ 0.08
Nup88-203ENSMUST00000108531 Wdr93Q402B2 695 aa15.55■□□□□ 0.08
Nup88-203ENSMUST00000108531 Gzf1Q4VBD9 706 aa15.55■□□□□ 0.08
Nup88-203ENSMUST00000108531 Rtn4Q99P72 1162 aaKnown RBP15.55■□□□□ 0.08
Nup88-203ENSMUST00000108531 Ripk4Q9ERK0 786 aa15.55■□□□□ 0.08
Nup88-203ENSMUST00000108531 Robo1O89026 1612 aa15.55■□□□□ 0.08
Nup88-203ENSMUST00000108531 Exoc6bA6H5Z3 810 aa15.55■□□□□ 0.08
Nup88-203ENSMUST00000108531 Tbc1d30Q69ZT9 766 aa15.55■□□□□ 0.08
Nup88-203ENSMUST00000108531 Casc1Q6TDU8 730 aa15.55■□□□□ 0.08
Nup88-203ENSMUST00000108531 Nol12Q8BG17 217 aa15.55■□□□□ 0.08
Nup88-203ENSMUST00000108531 Pof1bQ8K4L4 587 aa15.55■□□□□ 0.08
Nup88-203ENSMUST00000108531 Rufy3Q9D394 469 aa15.55■□□□□ 0.08
Nup88-203ENSMUST00000108531 Lmtk3Q5XJV6 1424 aa15.54■□□□□ 0.08
Nup88-203ENSMUST00000108531 Mindy4Q3UQI9 744 aa15.54■□□□□ 0.08
Nup88-203ENSMUST00000108531 Brf1Q8CFK2 676 aa15.54■□□□□ 0.08
Nup88-203ENSMUST00000108531 BcorQ8CGN4 1759 aa15.54■□□□□ 0.08
Nup88-203ENSMUST00000108531 Zfp804bA0A0G2JGH6 1343 aa15.54■□□□□ 0.08
Nup88-203ENSMUST00000108531 Fam184aE9PW83 1143 aa15.54■□□□□ 0.08
Nup88-203ENSMUST00000108531 Arhgef1Q61210 920 aaKnown RBP15.54■□□□□ 0.08
Nup88-203ENSMUST00000108531 Anp32cQ64G17 123 aa15.54■□□□□ 0.08
Nup88-203ENSMUST00000108531 Slc35g1Q8BY79 368 aa15.54■□□□□ 0.08
Nup88-203ENSMUST00000108531 Top1mtQ8R4U6 593 aa15.54■□□□□ 0.08
Nup88-203ENSMUST00000108531 Tceal9Q9DD24 104 aa15.54■□□□□ 0.08
Nup88-203ENSMUST00000108531 Nphp3Q7TNH6 1325 aa15.54■□□□□ 0.08
Nup88-203ENSMUST00000108531 Adcy9P51830 1353 aa15.53■□□□□ 0.08
Nup88-203ENSMUST00000108531 Cfdp1O88271 295 aaKnown RBP15.53■□□□□ 0.08
Nup88-203ENSMUST00000108531 Olfml1Q8BSH2 233 aa15.53■□□□□ 0.08
Nup88-203ENSMUST00000108531 Amotl2Q8K371 772 aa15.53■□□□□ 0.08
Nup88-203ENSMUST00000108531 Smc3Q9CW03 1217 aaKnown RBP15.53■□□□□ 0.08
Nup88-203ENSMUST00000108531 Stx6Q9JKK1 255 aa15.53■□□□□ 0.08
Nup88-203ENSMUST00000108531 Add2Q9QYB8 725 aa15.53■□□□□ 0.08
Nup88-203ENSMUST00000108531 Col1a2Q01149 1372 aa15.53■□□□□ 0.08
Nup88-203ENSMUST00000108531 Nid2O88322 1403 aa15.53■□□□□ 0.08
Nup88-203ENSMUST00000108531 Bms1Q6PGF5 1284 aaKnown RBP15.53■□□□□ 0.08
Nup88-203ENSMUST00000108531 Rbm10Q99KG3 930 aaKnown RBP15.53■□□□□ 0.08
Nup88-203ENSMUST00000108531 Mphosph10Q810V0 681 aaKnown RBP15.52■□□□□ 0.08
Nup88-203ENSMUST00000108531 Nfat5Q9WV30 1534 aa15.52■□□□□ 0.07
Nup88-203ENSMUST00000108531 Ppfia1B2RXQ2 1266 aa15.52■□□□□ 0.07
Nup88-203ENSMUST00000108531 Tti2Q8BGV4 512 aa15.52■□□□□ 0.07
Nup88-203ENSMUST00000108531 Abcc4E9Q236 1325 aa15.52■□□□□ 0.07
Nup88-203ENSMUST00000108531 Tmem94Q7TSH8 1360 aa15.52■□□□□ 0.07
Nup88-203ENSMUST00000108531 Syt1P46096 421 aa15.51■□□□□ 0.07
Nup88-203ENSMUST00000108531 Ube2hP62257 183 aa15.51■□□□□ 0.07
Nup88-203ENSMUST00000108531 Cchcr1Q8K2I2 770 aa15.51■□□□□ 0.07
Nup88-203ENSMUST00000108531 SrrtQ99MR6 875 aaKnown RBP15.51■□□□□ 0.07
Nup88-203ENSMUST00000108531 Atp10bB1AWN4 1474 aa15.51■□□□□ 0.07
Nup88-203ENSMUST00000108531 Fkbp4P30416 458 aa15.51■□□□□ 0.07
Nup88-203ENSMUST00000108531 Pde3bQ61409 1100 aa15.51■□□□□ 0.07
Nup88-203ENSMUST00000108531 Med4Q9CQA5 270 aa15.51■□□□□ 0.07
Nup88-203ENSMUST00000108531 C3P01027 1663 aa15.5■□□□□ 0.07
Nup88-203ENSMUST00000108531 1700006A11RikB9EHI3 544 aa15.5■□□□□ 0.07
Nup88-203ENSMUST00000108531 EspnlQ3UYR4 1005 aa15.5■□□□□ 0.07
Nup88-203ENSMUST00000108531 Eif3aP23116 1344 aaKnown RBP15.5■□□□□ 0.07
Nup88-203ENSMUST00000108531 Fam228bQ497Q6 232 aa15.5■□□□□ 0.07
Nup88-203ENSMUST00000108531 Ccdc178Q8CDV0 866 aa15.5■□□□□ 0.07
Nup88-203ENSMUST00000108531 Map3k13Q1HKZ5 959 aa15.49■□□□□ 0.07
Nup88-203ENSMUST00000108531 Tgfb1i1Q62219 461 aa15.49■□□□□ 0.07
Nup88-203ENSMUST00000108531 Ifit2Q64112 472 aa15.49■□□□□ 0.07
Nup88-203ENSMUST00000108531 Btbd11Q6GQW0 1109 aa15.49■□□□□ 0.07
Nup88-203ENSMUST00000108531 TatQ8QZR1 454 aa15.49■□□□□ 0.07
Nup88-203ENSMUST00000108531 Taf5lQ91WQ5 589 aa15.49■□□□□ 0.07
Nup88-203ENSMUST00000108531 Flt4P35917 1363 aa15.49■□□□□ 0.07
Nup88-203ENSMUST00000108531 Samm50Q8BGH2 469 aa15.49■□□□□ 0.07
Nup88-203ENSMUST00000108531 Zfp51Q3U4L8 781 aa15.48■□□□□ 0.07
Nup88-203ENSMUST00000108531 Zscan22Q8BGS5 496 aa15.48■□□□□ 0.07
Nup88-203ENSMUST00000108531 DpydQ8CHR6 1025 aa15.48■□□□□ 0.07
Nup88-203ENSMUST00000108531 Q9D9S1 216 aa15.48■□□□□ 0.07
Nup88-203ENSMUST00000108531 PsapQ61207 557 aaKnown RBP15.48■□□□□ 0.07
Nup88-203ENSMUST00000108531 Tbc1d31Q6NXY1 996 aa15.48■□□□□ 0.07
Nup88-203ENSMUST00000108531 Aox2Q5SGK3 1345 aa15.47■□□□□ 0.07
Nup88-203ENSMUST00000108531 Mybbp1aQ7TPV4 1344 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms