RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Ppp1r21Q3TDD9 780 aa18.21■□□□□ 0.51
Shank1-201ENSMUST00000107934 Efcab2Q9CQ46 164 aa18.21■□□□□ 0.51
Shank1-201ENSMUST00000107934 Ces1aE9PYP1 563 aa18.21■□□□□ 0.51
Shank1-201ENSMUST00000107934 Nip7Q9CXK8 180 aaKnown RBP18.21■□□□□ 0.51
Shank1-201ENSMUST00000107934 Ankle2Q6P1H6 964 aa18.2■□□□□ 0.5
Shank1-201ENSMUST00000107934 Znf653Q6YND2 615 aa18.2■□□□□ 0.5
Shank1-201ENSMUST00000107934 Txndc16Q7TN22 820 aa18.2■□□□□ 0.5
Shank1-201ENSMUST00000107934 Tacc1Q6Y685 774 aa18.2■□□□□ 0.5
Shank1-201ENSMUST00000107934 Thoc2B1AZI6 1594 aaKnown RBP18.2■□□□□ 0.5
Shank1-201ENSMUST00000107934 Hs1bp3Q3TC93 395 aa18.2■□□□□ 0.5
Shank1-201ENSMUST00000107934 Ddx19aQ61655 478 aaKnown RBP18.2■□□□□ 0.5
Shank1-201ENSMUST00000107934 Tmem132eQ6IEE6 982 aa18.2■□□□□ 0.5
Shank1-201ENSMUST00000107934 Cc2d1bQ8BRN9 848 aa18.2■□□□□ 0.5
Shank1-201ENSMUST00000107934 Luzp1Q8R4U7 1068 aaKnown RBP18.2■□□□□ 0.5
Shank1-201ENSMUST00000107934 ParvgQ9ERD8 331 aa18.2■□□□□ 0.5
Shank1-201ENSMUST00000107934 RalgapbQ8BQZ4 1484 aa18.2■□□□□ 0.5
Shank1-201ENSMUST00000107934 Ppm1eQ80TL0 749 aa18.19■□□□□ 0.5
Shank1-201ENSMUST00000107934 RarsQ9D0I9 660 aaKnown RBP18.19■□□□□ 0.5
Shank1-201ENSMUST00000107934 Jakmip2D3YXK0 820 aa18.19■□□□□ 0.5
Shank1-201ENSMUST00000107934 Pet2A2AHY8 747 aa18.19■□□□□ 0.5
Shank1-201ENSMUST00000107934 Limch1Q3UH68 1057 aa18.19■□□□□ 0.5
Shank1-201ENSMUST00000107934 Fam184aE9PW83 1143 aa18.19■□□□□ 0.5
Shank1-201ENSMUST00000107934 Klhdc4Q921I2 584 aa18.19■□□□□ 0.5
Shank1-201ENSMUST00000107934 Speer4dL7N216 212 aa18.19■□□□□ 0.5
Shank1-201ENSMUST00000107934 Matr3Q8K310 846 aaKnown RBP18.18■□□□□ 0.5
Shank1-201ENSMUST00000107934 Tmc2Q8R4P4 888 aa18.18■□□□□ 0.5
Shank1-201ENSMUST00000107934 Ift57Q8BXG3 429 aa18.18■□□□□ 0.5
Shank1-201ENSMUST00000107934 Izumo3A6PWV3 263 aa18.18■□□□□ 0.5
Shank1-201ENSMUST00000107934 Zbtb21E9Q444 1094 aa18.18■□□□□ 0.5
Shank1-201ENSMUST00000107934 Def6Q8C2K1 630 aa18.18■□□□□ 0.5
Shank1-201ENSMUST00000107934 Smc5Q8CG46 1101 aaKnown RBP18.18■□□□□ 0.5
Shank1-201ENSMUST00000107934 Nphp3Q7TNH6 1325 aa18.18■□□□□ 0.5
Shank1-201ENSMUST00000107934 Ncoa1P70365 1447 aa18.18■□□□□ 0.5
Shank1-201ENSMUST00000107934 Naip7Q9JIB3 1402 aa18.18■□□□□ 0.5
Shank1-201ENSMUST00000107934 Naip6Q9JIB6 1403 aa18.18■□□□□ 0.5
Shank1-201ENSMUST00000107934 Atp7aQ64430 1491 aa18.18■□□□□ 0.5
Shank1-201ENSMUST00000107934 St5Q924W7 1134 aa18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 DroshaQ5HZJ0 1373 aaKnown RBP18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Zc3h12cQ5DTV4 884 aa18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Kdm5bQ80Y84 1544 aa18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Map9Q3TRR0 646 aa18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Mctp2Q5RJH2 878 aa18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Hand2Q61039 217 aa18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Fbf1A2A870 1173 aa18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Cep120Q7TSG1 988 aa18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Ccdc150Q8CDI7 1110 aa18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Phf14Q9D4H9 881 aa18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Gpatch8A2A6A1 1505 aa18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Rprd2Q6NXI6 1469 aaKnown RBP18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Dnaaf4Q8R368 420 aa18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Mcm3P25206 812 aaKnown RBP18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Trim25Q61510 634 aaKnown RBP18.17■□□□□ 0.5
Shank1-201ENSMUST00000107934 Gm7347D3YYI9 267 aa18.16■□□□□ 0.5
Shank1-201ENSMUST00000107934 Speer4aF8VPX6 267 aa18.16■□□□□ 0.5
Shank1-201ENSMUST00000107934 Bag4Q8CI61 457 aa18.16■□□□□ 0.5
Shank1-201ENSMUST00000107934 TxlnaQ6PAM1 554 aaKnown RBP18.16■□□□□ 0.5
Shank1-201ENSMUST00000107934 Kdm3aQ6PCM1 1323 aa18.16■□□□□ 0.5
Shank1-201ENSMUST00000107934 Tbc1d9Q3UYK3 1264 aa18.16■□□□□ 0.5
Shank1-201ENSMUST00000107934 Ankrd13dQ6PD24 605 aa18.16■□□□□ 0.5
Shank1-201ENSMUST00000107934 Zmym4A2A791 1549 aaKnown RBP18.16■□□□□ 0.5
Shank1-201ENSMUST00000107934 Otud6bQ8K2H2 294 aa18.16■□□□□ 0.5
Shank1-201ENSMUST00000107934 Plekho1Q9JIY0 408 aa18.16■□□□□ 0.5
Shank1-201ENSMUST00000107934 Gbp4Q61107 620 aa18.15■□□□□ 0.5
Shank1-201ENSMUST00000107934 Jade2Q6ZQF7 829 aa18.15■□□□□ 0.5
Shank1-201ENSMUST00000107934 Echdc1Q9D9V3 322 aa18.15■□□□□ 0.5
Shank1-201ENSMUST00000107934 Zranb1Q7M760 708 aa18.15■□□□□ 0.5
Shank1-201ENSMUST00000107934 Pik3c2gO70167 1506 aa18.15■□□□□ 0.5
Shank1-201ENSMUST00000107934 Zap70P43404 618 aa18.15■□□□□ 0.5
Shank1-201ENSMUST00000107934 Tshz3Q8CGV9 1081 aa18.15■□□□□ 0.5
Shank1-201ENSMUST00000107934 Rbm19Q8R3C6 952 aaKnown RBP18.15■□□□□ 0.5
Shank1-201ENSMUST00000107934 PaskQ8CEE6 1383 aa18.14■□□□□ 0.5
Shank1-201ENSMUST00000107934 Ift74Q8BKE9 600 aa18.14■□□□□ 0.49
Shank1-201ENSMUST00000107934 Ccdc158Q8CDI6 1109 aa18.14■□□□□ 0.49
Shank1-201ENSMUST00000107934 Zbtb3Q91X45 518 aa18.14■□□□□ 0.49
Shank1-201ENSMUST00000107934 Rbm26Q6NZN0 1012 aaKnown RBP18.14■□□□□ 0.49
Shank1-201ENSMUST00000107934 Tom1O88746 492 aa18.14■□□□□ 0.49
Shank1-201ENSMUST00000107934 Nap1l2P51860 460 aa18.14■□□□□ 0.49
Shank1-201ENSMUST00000107934 Dydc1Q9D9T0 175 aa18.14■□□□□ 0.49
Shank1-201ENSMUST00000107934 Ankrd44B2RXR6 993 aa18.14■□□□□ 0.49
Shank1-201ENSMUST00000107934 Api5O35841 504 aaKnown RBP18.14■□□□□ 0.49
Shank1-201ENSMUST00000107934 Ncapg2Q6DFV1 1138 aa18.14■□□□□ 0.49
Shank1-201ENSMUST00000107934 Smtnl1Q99LM3 459 aa18.14■□□□□ 0.49
Shank1-201ENSMUST00000107934 WizO88286 1684 aaKnown RBP18.13■□□□□ 0.49
Shank1-201ENSMUST00000107934 Metap2O08663 478 aaKnown RBP18.13■□□□□ 0.49
Shank1-201ENSMUST00000107934 Rnf216P58283 853 aa18.13■□□□□ 0.49
Shank1-201ENSMUST00000107934 Tbc1d2bQ3U0J8 965 aa18.13■□□□□ 0.49
Shank1-201ENSMUST00000107934 MicalclQ9D5U9 680 aa18.13■□□□□ 0.49
Shank1-201ENSMUST00000107934 Cetn1P41209 172 aa18.13■□□□□ 0.49
Shank1-201ENSMUST00000107934 Triml1Q8BVP1 470 aa18.13■□□□□ 0.49
Shank1-201ENSMUST00000107934 Mrpl44Q9CY73 333 aaKnown RBP18.13■□□□□ 0.49
Shank1-201ENSMUST00000107934 Tmod2Q9JKK7 351 aa18.13■□□□□ 0.49
Shank1-201ENSMUST00000107934 BC005561E9Q5E2 1589 aa18.12■□□□□ 0.49
Shank1-201ENSMUST00000107934 Ccnl1Q52KE7 532 aaKnown RBP18.12■□□□□ 0.49
Shank1-201ENSMUST00000107934 Rnf34Q99KR6 376 aa18.12■□□□□ 0.49
Shank1-201ENSMUST00000107934 ImpactO55091 318 aa18.12■□□□□ 0.49
Shank1-201ENSMUST00000107934 EvcP57680 1005 aa18.12■□□□□ 0.49
Shank1-201ENSMUST00000107934 Ncf1Q09014 390 aa18.12■□□□□ 0.49
Shank1-201ENSMUST00000107934 Ddx10Q80Y44 875 aaKnown RBP18.12■□□□□ 0.49
Shank1-201ENSMUST00000107934 Cetn2Q9R1K9 172 aa18.12■□□□□ 0.49
Shank1-201ENSMUST00000107934 Gimap8Q75N62 688 aa18.12■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 187.9 ms