RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Znf287Q9EQB9 759 aa19.58■□□□□ 0.72
Usp47-201ENSMUST00000106653 Gli2Q0VGT2 1544 aa19.57■□□□□ 0.72
Usp47-201ENSMUST00000106653 Prrc2bQ7TPM1 1486 aaKnown RBP19.57■□□□□ 0.72
Usp47-201ENSMUST00000106653 Vps37dQ810I0 261 aa19.57■□□□□ 0.72
Usp47-201ENSMUST00000106653 Ttc5Q99LG4 440 aa19.57■□□□□ 0.72
Usp47-201ENSMUST00000106653 Pola1P33609 1465 aa19.57■□□□□ 0.72
Usp47-201ENSMUST00000106653 Astn2Q80Z10 1352 aa19.56■□□□□ 0.72
Usp47-201ENSMUST00000106653 Ppp1r9bQ6R891 817 aaKnown RBP19.56■□□□□ 0.72
Usp47-201ENSMUST00000106653 Slu7Q8BHJ9 585 aa19.56■□□□□ 0.72
Usp47-201ENSMUST00000106653 Nat10Q8K224 1024 aaKnown RBP19.56■□□□□ 0.72
Usp47-201ENSMUST00000106653 Lmtk2Q3TYD6 1471 aa19.56■□□□□ 0.72
Usp47-201ENSMUST00000106653 EvcP57680 1005 aa19.56■□□□□ 0.72
Usp47-201ENSMUST00000106653 Larp1Q6ZQ58 1072 aaKnown RBP19.56■□□□□ 0.72
Usp47-201ENSMUST00000106653 Tshz3Q8CGV9 1081 aa19.56■□□□□ 0.72
Usp47-201ENSMUST00000106653 ImpactO55091 318 aa19.56■□□□□ 0.72
Usp47-201ENSMUST00000106653 Limch1Q3UH68 1057 aa19.56■□□□□ 0.72
Usp47-201ENSMUST00000106653 CenpqQ9CPQ5 267 aa19.56■□□□□ 0.72
Usp47-201ENSMUST00000106653 Taf7Q9R1C0 341 aa19.56■□□□□ 0.72
Usp47-201ENSMUST00000106653 Asxl2Q8BZ32 1370 aa19.55■□□□□ 0.72
Usp47-201ENSMUST00000106653 Adck5Q80V03 582 aa19.55■□□□□ 0.72
Usp47-201ENSMUST00000106653 Nip7Q9CXK8 180 aaKnown RBP19.55■□□□□ 0.72
Usp47-201ENSMUST00000106653 Gas2l3Q3UWW6 683 aa19.55■□□□□ 0.72
Usp47-201ENSMUST00000106653 Lamb3Q61087 1168 aa19.55■□□□□ 0.72
Usp47-201ENSMUST00000106653 Rnf41Q8BH75 317 aa19.55■□□□□ 0.72
Usp47-201ENSMUST00000106653 Phldb2Q8K1N2 1249 aa19.55■□□□□ 0.72
Usp47-201ENSMUST00000106653 Luc7lQ9CYI4 371 aaKnown RBP19.55■□□□□ 0.72
Usp47-201ENSMUST00000106653 Amotl1Q9D4H4 968 aa19.55■□□□□ 0.72
Usp47-201ENSMUST00000106653 PtprgQ05909 1442 aa19.55■□□□□ 0.72
Usp47-201ENSMUST00000106653 Lrrc7Q80TE7 1490 aa19.54■□□□□ 0.72
Usp47-201ENSMUST00000106653 Trim27Q62158 513 aa19.54■□□□□ 0.72
Usp47-201ENSMUST00000106653 Nup160Q9Z0W3 1402 aaKnown RBP19.54■□□□□ 0.72
Usp47-201ENSMUST00000106653 Lrrfip1Q3UZ39 729 aaKnown RBP19.54■□□□□ 0.72
Usp47-201ENSMUST00000106653 Ccdc172Q810N9 267 aa19.54■□□□□ 0.72
Usp47-201ENSMUST00000106653 Trim11Q99PQ2 467 aa19.54■□□□□ 0.72
Usp47-201ENSMUST00000106653 Cct2P80314 535 aaKnown RBP19.54■□□□□ 0.72
Usp47-201ENSMUST00000106653 Kdm3aQ6PCM1 1323 aa19.54■□□□□ 0.72
Usp47-201ENSMUST00000106653 Slc13a4Q8BZ82 625 aa19.54■□□□□ 0.72
Usp47-201ENSMUST00000106653 Magi3Q9EQJ9 1476 aa19.54■□□□□ 0.72
Usp47-201ENSMUST00000106653 Spg7Q3ULF4 781 aa19.53■□□□□ 0.72
Usp47-201ENSMUST00000106653 GckrQ91X44 587 aa19.53■□□□□ 0.72
Usp47-201ENSMUST00000106653 Terf2O35144 541 aa19.53■□□□□ 0.72
Usp47-201ENSMUST00000106653 Atf7Q8R0S1 413 aa19.53■□□□□ 0.72
Usp47-201ENSMUST00000106653 Tbc1d32Q3URV1 1296 aa19.53■□□□□ 0.72
Usp47-201ENSMUST00000106653 Ppip5k1A2ARP1 1436 aa19.53■□□□□ 0.72
Usp47-201ENSMUST00000106653 Cers3Q1A3B0 383 aa19.53■□□□□ 0.72
Usp47-201ENSMUST00000106653 Dnajc10Q9DC23 793 aa19.53■□□□□ 0.72
Usp47-201ENSMUST00000106653 Speer4dL7N216 212 aa19.52■□□□□ 0.72
Usp47-201ENSMUST00000106653 Lrrc45Q8CIM1 670 aa19.52■□□□□ 0.72
Usp47-201ENSMUST00000106653 Gnl2Q99LH1 728 aaKnown RBP19.52■□□□□ 0.72
Usp47-201ENSMUST00000106653 Lmbr1lQ9D1E5 489 aa19.52■□□□□ 0.72
Usp47-201ENSMUST00000106653 Erich4Q3UNU4 136 aa19.52■□□□□ 0.72
Usp47-201ENSMUST00000106653 FanclQ9CR14 375 aa19.52■□□□□ 0.72
Usp47-201ENSMUST00000106653 SrrtQ99MR6 875 aaKnown RBP19.52■□□□□ 0.72
Usp47-201ENSMUST00000106653 Zbtb22Q9Z0G7 638 aa19.52■□□□□ 0.71
Usp47-201ENSMUST00000106653 Ppfia1B2RXQ2 1266 aa19.51■□□□□ 0.71
Usp47-201ENSMUST00000106653 Kcnn1Q9EQR3 537 aa19.51■□□□□ 0.71
Usp47-201ENSMUST00000106653 NsmfQ99NF2 532 aa19.51■□□□□ 0.71
Usp47-201ENSMUST00000106653 Plekho1Q9JIY0 408 aa19.51■□□□□ 0.71
Usp47-201ENSMUST00000106653 Hmg20bQ9Z104 317 aa19.51■□□□□ 0.71
Usp47-201ENSMUST00000106653 Mast1Q9R1L5 1570 aa19.5■□□□□ 0.71
Usp47-201ENSMUST00000106653 Traf3ip1Q149C2 625 aa19.5■□□□□ 0.71
Usp47-201ENSMUST00000106653 Ppp1r21Q3TDD9 780 aa19.5■□□□□ 0.71
Usp47-201ENSMUST00000106653 Rbm10Q99KG3 930 aaKnown RBP19.5■□□□□ 0.71
Usp47-201ENSMUST00000106653 LifrP42703 1092 aa19.5■□□□□ 0.71
Usp47-201ENSMUST00000106653 ParvgQ9ERD8 331 aa19.5■□□□□ 0.71
Usp47-201ENSMUST00000106653 Stx6Q9JKK1 255 aa19.5■□□□□ 0.71
Usp47-201ENSMUST00000106653 Skint5A7XUY5 1461 aa19.5■□□□□ 0.71
Usp47-201ENSMUST00000106653 Ccnl1Q52KE7 532 aaKnown RBP19.5■□□□□ 0.71
Usp47-201ENSMUST00000106653 Cavin2Q63918 418 aaKnown RBP19.5■□□□□ 0.71
Usp47-201ENSMUST00000106653 Nap1l5Q9JJF0 156 aa19.5■□□□□ 0.71
Usp47-201ENSMUST00000106653 Izumo3A6PWV3 263 aa19.49■□□□□ 0.71
Usp47-201ENSMUST00000106653 Mcm3P25206 812 aaKnown RBP19.49■□□□□ 0.71
Usp47-201ENSMUST00000106653 Atp8b2P98199 1209 aa19.49■□□□□ 0.71
Usp47-201ENSMUST00000106653 Slc14a2Q8R4T9 930 aa19.49■□□□□ 0.71
Usp47-201ENSMUST00000106653 Smarcc1P97496 1104 aa19.49■□□□□ 0.71
Usp47-201ENSMUST00000106653 Ccdc158Q8CDI6 1109 aa19.49■□□□□ 0.71
Usp47-201ENSMUST00000106653 Fam13bQ8K2H3 851 aa19.49■□□□□ 0.71
Usp47-201ENSMUST00000106653 Mcm4P49717 862 aa19.49■□□□□ 0.71
Usp47-201ENSMUST00000106653 Krt25Q8VCW2 446 aa19.49■□□□□ 0.71
Usp47-201ENSMUST00000106653 Rasa1E9PYG6 1038 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 Rad23bP54728 416 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 Ccdc102aQ3TMW1 549 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 Hand2Q61039 217 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 Nkx1-2P42580 305 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 ArsiQ32KI9 573 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 Ccdc66Q6NS45 935 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 Dnaaf4Q8R368 420 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 Abca5Q8K448 1642 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 KdrP35918 1367 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 Cavin1O54724 392 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 Grm8P47743 908 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 Tmem266Q8BZB3 538 aa19.48■□□□□ 0.71
Usp47-201ENSMUST00000106653 Zc3h12cQ5DTV4 884 aa19.47■□□□□ 0.71
Usp47-201ENSMUST00000106653 Igf2bp2Q5SF07 592 aaKnown RBP19.47■□□□□ 0.71
Usp47-201ENSMUST00000106653 Tom1O88746 492 aa19.47■□□□□ 0.71
Usp47-201ENSMUST00000106653 Stxbp4Q9WV89 557 aa19.47■□□□□ 0.71
Usp47-201ENSMUST00000106653 Ddx46Q569Z5 1032 aaKnown RBP19.47■□□□□ 0.71
Usp47-201ENSMUST00000106653 Ccdc150Q8CDI7 1110 aa19.47■□□□□ 0.71
Usp47-201ENSMUST00000106653 Brms1Q99N20 246 aa19.47■□□□□ 0.71
Usp47-201ENSMUST00000106653 LlphQ9D945 130 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 156.2 ms