RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 Kcna6Q61923 529 aa16.75■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Phf23Q8BSN5 401 aa16.75■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Smarca5Q91ZW3 1051 aaKnown RBP16.75■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Cspp1B2RX88 1205 aa16.74■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Zkscan2G3X952 960 aa16.74■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Stk26Q99JT2 416 aa16.74■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Usp16Q99LG0 825 aa16.74■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Nhsl1Q8CAF4 1587 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 U2af2P26369 475 aaKnown RBP16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Cdkn1cP49919 348 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Ube2hP62257 183 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Fam114a1Q9D281 569 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Siglec1Q62230 1695 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Sema6bO54951 886 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Hoxa7P02830 229 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Zhx1P70121 873 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Fez2Q6TYB5 348 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Kcnf1Q7TSH7 493 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Tmem132aQ922P8 1018 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Tbc1d8Q9Z1A9 1134 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Pik3c2bE9QAN8 1632 aa16.73■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Ppp1r15aP17564 657 aa16.72■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Nxf2Q4ZGD8 691 aa16.72■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Ercc6lQ8BHK9 1240 aa16.72■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Mmel1Q9JLI3 765 aa16.72■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Atp2b2Q9R0K7 1198 aa16.72■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Ms4a1P19437 291 aa16.71■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Kiaa0754Q69ZZ9 979 aa16.71■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Rab3gap1Q80UJ7 981 aa16.71■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Zscan22Q8BGS5 496 aa16.71■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Zeb2Q9R0G7 1215 aa16.71■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 RdxP26043 583 aaKnown RBP16.71■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 EvcP57680 1005 aa16.71■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Cfap157Q0VFX2 523 aa16.71■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Utp18Q5SSI6 552 aaKnown RBP16.71■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Plcd3Q8K2J0 785 aa16.71■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Sipa1l2Q80TE4 1722 aa16.71■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Frmpd2A0A140LI67 1392 aa16.7■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Oas2E9Q9A9 742 aa16.7■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Cfap73J3QPZ5 306 aa16.7■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Cpa2Q504N0 417 aa16.7■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Farp2Q91VS8 1065 aa16.7■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Lmod3E9QA62 571 aa16.69■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Prkar2bP31324 416 aa16.69■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Znf526Q8BI66 675 aa16.69■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Nop14Q8R3N1 860 aaKnown RBP16.69■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Noc3lQ8VI84 807 aaKnown RBP16.69■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 RestQ8VIG1 1082 aa16.69■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Phactr2B1AVP0 632 aa16.69■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Gsto1O09131 240 aa16.69■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Ess2O70279 479 aa16.69■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Utp3Q9JI13 469 aaKnown RBP16.69■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 C5P06684 1680 aa16.68■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Chl1P70232 1209 aa16.68■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Cep170bQ80U49 1574 aa16.68■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Bcar3Q9QZK2 820 aa16.68■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Ccdc178Q8CDV0 866 aa16.68■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Bcl2l12Q9D3J3 255 aa16.68■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 PdcQ9QW08 244 aa16.68■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Als2Q920R0 1651 aa16.67■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Tpd52l1O54818 204 aa16.67■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Cdk4P30285 303 aa16.67■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Ints3Q7TPD0 1041 aaKnown RBP16.67■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Cc2d1aQ8K1A6 943 aa16.67■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Camta1A2A891 1682 aa16.66■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Marf1Q8BJ34 1730 aaKnown RBP16.66■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Elmsan1E9Q2I4 1089 aaKnown RBP16.66■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Pdzrn3Q69ZS0 1063 aa16.66■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Samm50Q8BGH2 469 aa16.66■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Ddx41Q91VN6 622 aaKnown RBP16.66■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Abcc10Q8R4P9 1501 aa16.66■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Zkscan7E9PVW1 718 aa16.66■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Ggt6Q6PDE7 497 aa16.66■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Ttc27Q8CD92 847 aa16.66■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Add3Q9QYB5 706 aaKnown RBP16.66■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Kif1aP33173 1695 aa16.65■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Tmem2Q5FWI3 1383 aa16.65■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 GnpatP98192 678 aa16.65■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 MypopQ8R4U1 393 aa16.65■□□□□ 0.26
Hoxc4-201ENSMUST00000100164 Pcmtd1P59913 357 aa16.64■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Taf3Q5HZG4 932 aa16.64■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Zranb1Q7M760 708 aa16.64■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Ptpdc1Q6NZK8 747 aa16.64■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Bms1Q6PGF5 1284 aaKnown RBP16.64■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Ubn2Q80WC1 1314 aa16.64■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 N4bp2F8VQG7 1678 aaKnown RBP16.63■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Ms4a2P20490 235 aa16.63■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Gpatch11Q3UFS4 262 aa16.63■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Cchcr1Q8K2I2 770 aa16.63■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Sf3a1Q8K4Z5 791 aaKnown RBP16.63■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Ifi35Q9D8C4 286 aa16.63■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Stx6Q9JKK1 255 aa16.63■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Adgrb1Q3UHD1 1582 aa16.62■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 CebpzP53569 1052 aaKnown RBP16.62■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Sh3bp1P55194 680 aa16.62■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Usp25P57080 1055 aa16.62■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Aifm3Q3TY86 605 aa16.62■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Tshz1Q5DTH5 1084 aa16.62■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 U2surpQ6NV83 1029 aaKnown RBP16.62■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Zkscan5Q9Z1D8 819 aa16.62■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms