RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Large2Q5XPT3 690 aa16.52■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Msl1Q6PDM1 616 aa16.52■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Amotl2Q8K371 772 aa16.52■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Tfip11Q9ERA6 838 aaKnown RBP16.52■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Flt4P35917 1363 aa16.51■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Sbno1Q689Z5 1390 aa16.51■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 SmapQ9R0P4 181 aaKnown RBP16.51■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Tspoap1Q7TNF8 1846 aa16.5■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Dsc3P55850 896 aa16.5■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Irx5Q9JKQ4 484 aa16.5■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Card11Q8CIS0 1159 aa16.48■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Taf1dQ9D4V4 322 aa16.48■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Jdp2P97875 163 aa16.47■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Rccd1Q8BTU7 377 aa16.47■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Plcd4Q8K3R3 807 aa16.47■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Sos2Q02384 1333 aa16.46■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Dot1lQ6XZL8 1540 aa16.46■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 VegfbP49766 207 aa16.46■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Rem2Q8VEL9 341 aa16.46■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Pcdhb16Q91Y03 802 aa16.46■□□□□ 0.23
Hmgb1-202ENSMUST00000093196 Tmf1B9EKI3 1091 aa16.45■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Lysmd1Q9D0E3 226 aa16.45■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Mst1rQ62190 1378 aa16.44■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Dusp27Q148W8 1138 aa16.44■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Dll1Q61483 722 aa16.44■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Trim26Q99PN3 545 aa16.44■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Gpc1Q9QZF2 557 aa16.44■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Smg6P61406 1418 aaKnown RBP16.44■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Col24a1Q30D77 1733 aa16.43■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Gm20521D3Z5F7 333 aa16.43■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Tgfb2P27090 414 aa16.43■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Klra4Q60651 263 aa16.43■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 DiexfQ8BTT6 772 aaKnown RBP16.43■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Ginm1Q91WR6 327 aa16.43■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Kiaa1107Q80TK0 1369 aa16.42■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 MeiocA2AG06 965 aa16.42■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Exoc5Q3TPX4 708 aa16.42■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Sik1Q60670 779 aa16.42■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 TrhQ62361 256 aa16.42■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Znf316Q6PGE4 1016 aa16.42■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 NptxrQ99J85 493 aa16.42■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Abca14E9Q8F8 1683 aa16.41■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Usp46P62069 366 aa16.41■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Cdv3Q4VAA2 281 aaKnown RBP16.41■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 ClmQ7TSN2 230 aa16.4■□□□□ 0.22
Hmgb1-202ENSMUST00000093196 Sned1Q70E20 1403 aa16.39■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Thsd7bQ6P4U0 1607 aa16.39■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Gm42715A0A087WP63 3095 aaKnown RBP16.39■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Q9CQ90 155 aa16.39■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Hspa8P63017 646 aaKnown RBP16.38■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Eml3Q8VC03 897 aa16.38■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Klhdc4Q921I2 584 aa16.38■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Mon2Q80TL7 1715 aa16.38■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Trak1Q6PD31 939 aa16.37■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 RgmbQ7TQ33 436 aa16.37■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Card10P58660 1021 aa16.36■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Igflr1Q3U4N7 345 aa16.36■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Cyp2c67Q569X9 491 aa16.36■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Abca3Q8R420 1704 aa16.36■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Kiaa1522A2A7S8 1013 aa16.35■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Chtf18Q8BIW9 969 aa16.35■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Limd1Q9QXD8 668 aa16.35■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 B4galnt4Q766D5 1034 aa16.34■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Igsf1Q7TQA1 1317 aa16.34■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Col6a3E9PWQ3 3284 aa16.34■□□□□ 0.21
Hmgb1-202ENSMUST00000093196 Fmr1nbQ80ZA7 238 aa16.33■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Clcn1Q64347 994 aa16.32■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Arid5bQ8BM75 1188 aaKnown RBP16.32■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Tnrc6bQ8BKI2 1810 aaKnown RBP16.31■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Usp47Q8BY87 1376 aa16.31■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Zfp777B9EKF4 885 aa16.31■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Hsd17b7O88736 334 aa16.31■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Hmgb2P30681 210 aaKnown RBP16.31■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Kiaa0319lQ8K135 1048 aa16.31■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 PdgfdQ925I7 370 aa16.31■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Cypt3B1AY64 174 aa16.3■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Nedd4P46935 887 aaKnown RBP16.3■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 MetrnQ8C1Q4 291 aa16.3■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Cep57l1Q8VDS7 400 aa16.3■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Stk11ipQ3TAA7 1072 aa16.29■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Kcnc4Q8R1C0 628 aa16.29■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Slc52a2Q9D8F3 450 aa16.29■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Nubp1Q9R060 320 aa16.29■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Atp2b2Q9R0K7 1198 aa16.29■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Ankrd33bQ3U0L2 486 aa16.28■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Pik3ap1Q9EQ32 811 aa16.28■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Piezo1E2JF22 2547 aa16.28■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 4930567H17RikQ3V0K5 233 aa16.27■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Adnp2Q8CHC8 1165 aaKnown RBP16.27■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Scn11aQ9R053 1765 aa16.27■□□□□ 0.2
Hmgb1-202ENSMUST00000093196 Map2k7Q8CE90 535 aa16.26■□□□□ 0.19
Hmgb1-202ENSMUST00000093196 Plch1Q4KWH5 1682 aa16.26■□□□□ 0.19
Hmgb1-202ENSMUST00000093196 B230104I21RikQ3USW4 141 aa16.25■□□□□ 0.19
Hmgb1-202ENSMUST00000093196 Trim32Q8CH72 655 aa16.25■□□□□ 0.19
Hmgb1-202ENSMUST00000093196 Sumf1Q8R0F3 372 aa16.25■□□□□ 0.19
Hmgb1-202ENSMUST00000093196 Ppp2r2dQ925E7 453 aa16.25■□□□□ 0.19
Hmgb1-202ENSMUST00000093196 Ppp1r3fQ9JIG4 799 aa16.25■□□□□ 0.19
Hmgb1-202ENSMUST00000093196 C4bP01029 1738 aa16.25■□□□□ 0.19
Hmgb1-202ENSMUST00000093196 Szt2A2A9C3 3431 aa16.25■□□□□ 0.19
Hmgb1-202ENSMUST00000093196 4933416C03RikQ3V063 378 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms