RNA–Protein interactions for RNA: ENSMUST00000075084.4

Trim58-201, Transcript of E3 ubiquitin-protein ligase TRIM58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim58, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58-201ENSMUST00000075084 Ier5O89113 308 aa22.63■■□□□ 1.21
Trim58-201ENSMUST00000075084 Mphosph10Q810V0 681 aaKnown RBP22.63■■□□□ 1.21
Trim58-201ENSMUST00000075084 Fam50bQ9WTJ8 334 aa22.63■■□□□ 1.21
Trim58-201ENSMUST00000075084 SympkQ80X82 1284 aa22.62■■□□□ 1.21
Trim58-201ENSMUST00000075084 Cfdp1O88271 295 aaKnown RBP22.62■■□□□ 1.21
Trim58-201ENSMUST00000075084 Zkscan2G3X952 960 aa22.61■■□□□ 1.21
Trim58-201ENSMUST00000075084 Map3k2Q61083 619 aa22.61■■□□□ 1.21
Trim58-201ENSMUST00000075084 Q9D2X8 372 aa22.61■■□□□ 1.21
Trim58-201ENSMUST00000075084 Tlr7P58681 1050 aa22.6■■□□□ 1.21
Trim58-201ENSMUST00000075084 Ptpdc1Q6NZK8 747 aa22.6■■□□□ 1.21
Trim58-201ENSMUST00000075084 Ggt6Q6PDE7 497 aa22.6■■□□□ 1.21
Trim58-201ENSMUST00000075084 Pdia6Q922R8 440 aaKnown RBP22.59■■□□□ 1.21
Trim58-201ENSMUST00000075084 Ubr2Q6WKZ8 1755 aa22.59■■□□□ 1.21
Trim58-201ENSMUST00000075084 Irf9Q61179 399 aa22.59■■□□□ 1.21
Trim58-201ENSMUST00000075084 4930572O03RikQ8C5Y0 211 aa22.59■■□□□ 1.21
Trim58-201ENSMUST00000075084 Map3k13Q1HKZ5 959 aa22.58■■□□□ 1.21
Trim58-201ENSMUST00000075084 Hmox1P14901 289 aa22.57■■□□□ 1.2
Trim58-201ENSMUST00000075084 Iqsec3Q3TES0 1195 aa22.57■■□□□ 1.2
Trim58-201ENSMUST00000075084 Asic4Q7TNS7 539 aa22.57■■□□□ 1.2
Trim58-201ENSMUST00000075084 RestQ8VIG1 1082 aa22.57■■□□□ 1.2
Trim58-201ENSMUST00000075084 CalcaP70160 136 aa22.56■■□□□ 1.2
Trim58-201ENSMUST00000075084 Slc4a10Q5DTL9 1118 aa22.56■■□□□ 1.2
Trim58-201ENSMUST00000075084 1700010I14RikQ7TPG0 532 aa22.56■■□□□ 1.2
Trim58-201ENSMUST00000075084 EngaseQ8BX80 734 aa22.56■■□□□ 1.2
Trim58-201ENSMUST00000075084 Pdlim2Q8R1G6 349 aa22.56■■□□□ 1.2
Trim58-201ENSMUST00000075084 Nsfl1cQ9CZ44 370 aaKnown RBP22.56■■□□□ 1.2
Trim58-201ENSMUST00000075084 Elp1Q7TT37 1333 aaKnown RBP22.55■■□□□ 1.2
Trim58-201ENSMUST00000075084 Rfx1P48377 963 aa22.55■■□□□ 1.2
Trim58-201ENSMUST00000075084 Kdm4cQ8VCD7 1054 aa22.55■■□□□ 1.2
Trim58-201ENSMUST00000075084 Zeb2Q9R0G7 1215 aa22.55■■□□□ 1.2
Trim58-201ENSMUST00000075084 HellsQ60848 821 aa22.54■■□□□ 1.2
Trim58-201ENSMUST00000075084 Erc2Q6PH08 957 aa22.54■■□□□ 1.2
Trim58-201ENSMUST00000075084 Ssfa2Q922B9 1252 aa22.54■■□□□ 1.2
Trim58-201ENSMUST00000075084 TefQ9JLC6 301 aa22.54■■□□□ 1.2
Trim58-201ENSMUST00000075084 Antxr1Q9CZ52 562 aa22.53■■□□□ 1.2
Trim58-201ENSMUST00000075084 Hoxa7P02830 229 aa22.53■■□□□ 1.2
Trim58-201ENSMUST00000075084 Tceal9Q9DD24 104 aa22.53■■□□□ 1.2
Trim58-201ENSMUST00000075084 Eif3aP23116 1344 aaKnown RBP22.52■■□□□ 1.2
Trim58-201ENSMUST00000075084 Cnnm1Q0GA42 951 aa22.52■■□□□ 1.2
Trim58-201ENSMUST00000075084 Prune1Q8BIW1 454 aa22.52■■□□□ 1.2
Trim58-201ENSMUST00000075084 Eif3bQ8JZQ9 803 aaKnown RBP22.52■■□□□ 1.2
Trim58-201ENSMUST00000075084 Tjp1P39447 1745 aaKnown RBP22.52■■□□□ 1.2
Trim58-201ENSMUST00000075084 Igfbp6P47880 238 aa22.52■■□□□ 1.2
Trim58-201ENSMUST00000075084 Tgfb1i1Q62219 461 aa22.52■■□□□ 1.2
Trim58-201ENSMUST00000075084 Akap11E9Q777 1895 aa22.51■■□□□ 1.19
Trim58-201ENSMUST00000075084 Larp1Q6ZQ58 1072 aaKnown RBP22.51■■□□□ 1.19
Trim58-201ENSMUST00000075084 Bicc1Q99MQ1 977 aaKnown RBP22.51■■□□□ 1.19
Trim58-201ENSMUST00000075084 Tpx2A2APB8 745 aaKnown RBP22.5■■□□□ 1.19
Trim58-201ENSMUST00000075084 Speer4bQ9D9F7 267 aa22.5■■□□□ 1.19
Trim58-201ENSMUST00000075084 Cct4P80315 539 aaKnown RBP22.5■■□□□ 1.19
Trim58-201ENSMUST00000075084 Prkab2Q6PAM0 271 aa22.5■■□□□ 1.19
Trim58-201ENSMUST00000075084 Morc2aQ69ZX6 1030 aa22.49■■□□□ 1.19
Trim58-201ENSMUST00000075084 Nyap1Q6PFX7 833 aa22.49■■□□□ 1.19
Trim58-201ENSMUST00000075084 Ccdc9Q8VC31 543 aaKnown RBP22.49■■□□□ 1.19
Trim58-201ENSMUST00000075084 Psrc1Q9D0P7 329 aa22.49■■□□□ 1.19
Trim58-201ENSMUST00000075084 PigbQ9JJQ0 542 aa22.49■■□□□ 1.19
Trim58-201ENSMUST00000075084 Gm21663A0A0G2JE01 267 aa22.49■■□□□ 1.19
Trim58-201ENSMUST00000075084 Gm7361D3Z6R1 267 aa22.49■■□□□ 1.19
Trim58-201ENSMUST00000075084 5031410I06RikE9Q4E0 267 aa22.49■■□□□ 1.19
Trim58-201ENSMUST00000075084 Gm1979E9QAN3 267 aa22.49■■□□□ 1.19
Trim58-201ENSMUST00000075084 Gm5862K7N5V5 267 aa22.49■■□□□ 1.19
Trim58-201ENSMUST00000075084 Gm10220K7N660 267 aa22.49■■□□□ 1.19
Trim58-201ENSMUST00000075084 Mum1Q6DID5 682 aa22.49■■□□□ 1.19
Trim58-201ENSMUST00000075084 Rnf123Q5XPI3 1314 aa22.48■■□□□ 1.19
Trim58-201ENSMUST00000075084 Sema6bO54951 886 aa22.48■■□□□ 1.19
Trim58-201ENSMUST00000075084 Noc3lQ8VI84 807 aaKnown RBP22.48■■□□□ 1.19
Trim58-201ENSMUST00000075084 Gm21680A0A0G2JGR8 267 aa22.48■■□□□ 1.19
Trim58-201ENSMUST00000075084 Ddx60E9PZQ1 1711 aa22.47■■□□□ 1.19
Trim58-201ENSMUST00000075084 Grm8P47743 908 aa22.47■■□□□ 1.19
Trim58-201ENSMUST00000075084 Ppm1mQ8BU27 406 aa22.47■■□□□ 1.19
Trim58-201ENSMUST00000075084 Slc5a1Q8C3K6 665 aa22.47■■□□□ 1.19
Trim58-201ENSMUST00000075084 Ccdc129Q14B48 1034 aa22.46■■□□□ 1.19
Trim58-201ENSMUST00000075084 Ttll7A4Q9F0 912 aa22.46■■□□□ 1.19
Trim58-201ENSMUST00000075084 4933416C03RikQ3V063 378 aa22.46■■□□□ 1.19
Trim58-201ENSMUST00000075084 Lmbr1lQ9D1E5 489 aa22.46■■□□□ 1.19
Trim58-201ENSMUST00000075084 Nol8Q3UHX0 1147 aaKnown RBP22.45■■□□□ 1.18
Trim58-201ENSMUST00000075084 Efcab2Q9CQ46 164 aa22.45■■□□□ 1.18
Trim58-201ENSMUST00000075084 Hsp90b1P08113 802 aaKnown RBP22.45■■□□□ 1.18
Trim58-201ENSMUST00000075084 Stk11ipQ3TAA7 1072 aa22.45■■□□□ 1.18
Trim58-201ENSMUST00000075084 Rsph3aQ3UFY4 516 aa22.45■■□□□ 1.18
Trim58-201ENSMUST00000075084 Cntnap1O54991 1385 aa22.44■■□□□ 1.18
Trim58-201ENSMUST00000075084 Pa2g4P50580 394 aaKnown RBP22.44■■□□□ 1.18
Trim58-201ENSMUST00000075084 MypopQ8R4U1 393 aa22.44■■□□□ 1.18
Trim58-201ENSMUST00000075084 Eno4Q8C042 619 aa22.43■■□□□ 1.18
Trim58-201ENSMUST00000075084 Slc39a6Q8C145 765 aa22.43■■□□□ 1.18
Trim58-201ENSMUST00000075084 Emilin2Q8K482 1074 aa22.43■■□□□ 1.18
Trim58-201ENSMUST00000075084 Nhsl1Q8CAF4 1587 aa22.43■■□□□ 1.18
Trim58-201ENSMUST00000075084 Unc5clQ6R653 518 aa22.43■■□□□ 1.18
Trim58-201ENSMUST00000075084 Abcc4E9Q236 1325 aa22.43■■□□□ 1.18
Trim58-201ENSMUST00000075084 Shank2Q80Z38 1476 aa22.43■■□□□ 1.18
Trim58-201ENSMUST00000075084 Mrps27Q8BK72 415 aaKnown RBP22.42■■□□□ 1.18
Trim58-201ENSMUST00000075084 Zkscan16A2ALW2 728 aa22.42■■□□□ 1.18
Trim58-201ENSMUST00000075084 Hspa2P17156 633 aa22.42■■□□□ 1.18
Trim58-201ENSMUST00000075084 Lrp6O88572 1613 aa22.41■■□□□ 1.18
Trim58-201ENSMUST00000075084 Kiaa0232Q80U59 1396 aaKnown RBP22.41■■□□□ 1.18
Trim58-201ENSMUST00000075084 Kcnh4A2A5F7 1018 aa22.4■■□□□ 1.18
Trim58-201ENSMUST00000075084 VgfQ0VGU4 617 aa22.4■■□□□ 1.18
Trim58-201ENSMUST00000075084 Pm20d1Q8C165 503 aa22.4■■□□□ 1.18
Trim58-201ENSMUST00000075084 Zbtb3Q91X45 518 aa22.4■■□□□ 1.18
Trim58-201ENSMUST00000075084 Fer1l6E0CZ42 1862 aa22.4■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 65.5 ms