RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Slc4a2P13808 1237 aaKnown RBP10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Spock3Q8BKV0 436 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Iqcf3Q9D498 203 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 March10E9PX79 788 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Dctn1O08788 1281 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Afg3l2Q8JZQ2 802 aaKnown RBP10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Otud6bQ8K2H2 294 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Sox5P35710 763 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Tshz1Q5DTH5 1084 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Tmc2Q8R4P4 888 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Npm3Q9CPP0 175 aaKnown RBP10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Cfap53Q9D439 514 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Gdpd2Q9ESM6 539 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Gm15262A0A140LIQ5 728 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Tpx2A2APB8 745 aaKnown RBP10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 NexnQ7TPW1 607 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Mterf2Q8BKY8 385 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Cd248Q91V98 765 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Orc1Q9Z1N2 840 aaKnown RBP10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Dnajc5P60904 198 aa10.43□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Mcm6P97311 821 aa10.43□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Gbp4Q61107 620 aa10.43□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Sept10Q8C650 452 aa10.43□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Gramd1bQ80TI0 738 aa10.43□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Snapc1Q8K0S9 389 aa10.43□□□□□ -0.74
Clcn3-202ENSMUST00000056508 TiprlQ8BH58 271 aa10.43□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Mapk8ip1Q9WVI9 707 aa10.43□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Ccdc170D3YXL0 722 aa10.43□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Map2k1P31938 393 aa10.43□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Rapgef1Q3UHC1 1224 aa10.43□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Mrpl11Q9CQF0 192 aaKnown RBP10.43□□□□□ -0.74
Clcn3-202ENSMUST00000056508 LdhaP06151 332 aaKnown RBP10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Satb2Q8VI24 733 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Fam50bQ9WTJ8 334 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Cplx1P63040 134 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 4933415F23RikQ14BX6 153 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Fchsd2Q3USJ8 740 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Nlrp4fQ66X05 959 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Map2k5Q9WVS7 448 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Nek4Q9Z1J2 792 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Nlrp4cQ3TKR3 982 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Plcb4Q91UZ1 1175 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Anapc16Q9CPV2 110 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Ipo7Q9EPL8 1038 aaKnown RBP10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Washc2Q6PGL7 1334 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Rasa1E9PYG6 1038 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Mkl2P59759 1080 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Fbxo9Q8BK06 437 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Chmp7Q8R1T1 451 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 AasdhpptQ9CQF6 309 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Rasal2E9PW37 1286 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Pex5O09012 639 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Snx32Q80ZJ7 404 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Catsper4Q8BVN3 442 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Fermt2Q8CIB5 680 aa10.42□□□□□ -0.74
Clcn3-202ENSMUST00000056508 E2f5Q61502 335 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 KaznQ69ZS8 779 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Mipol1Q9D9F8 279 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Map7d1A2AJI0 846 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Pde6bP23440 856 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Rph3aP47708 681 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Nol10Q5RJG1 687 aaKnown RBP10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Klhdc4Q921I2 584 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Klhl10Q9D5V2 608 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Ssh1Q76I79 1042 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Cmtm2bQ9DAC0 210 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Map3k20Q9ESL4 802 aaKnown RBP10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 IdeQ9JHR7 1019 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 UcmaQ14BU0 138 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Dgcr8Q9EQM6 773 aa10.41□□□□□ -0.74
Clcn3-202ENSMUST00000056508 9630041A04RikD3Z3U4 205 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Hmox1P14901 289 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Nf2P46662 596 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Znf710Q3U288 666 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Rnf168Q80XJ2 565 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Ptcd1Q8C2E4 695 aaKnown RBP10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Trim68Q8K243 485 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Eif4g2Q62448 906 aaKnown RBP10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Pnma8aQ80VM8 430 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Eml3Q8VC03 897 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Lrrfip2Q91WK0 415 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Gm5483B2RV77 97 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Fndc11Q80WB0 326 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Thumpd2Q9CZB3 528 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Mkl1Q8K4J6 964 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Dnaaf4Q8R368 420 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Zbtb3Q91X45 518 aa10.4□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Fam186bD3Z420 943 aa10.4□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Nutm2Q3V0C3 733 aa10.4□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Lrrc43Q3V0L5 667 aa10.4□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Map3k7Q62073 579 aa10.4□□□□□ -0.75
Clcn3-202ENSMUST00000056508 OptnQ8K3K8 584 aa10.4□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Psmc4P54775 418 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Fsd1Q7TPM6 496 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 BlvraQ9CY64 295 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Nkx1-1G3UXB3 402 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Mbl1P39039 239 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Gm136Q3V037 328 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Tsnaxip1Q99P25 704 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Kcna2P63141 499 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms