RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Arhgef1Q61210 920 aaKnown RBP13.41□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Btbd11Q6GQW0 1109 aa13.41□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Ptpdc1Q6NZK8 747 aa13.41□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Nkx2-3P97334 362 aa13.4□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Abcb7Q61102 752 aaKnown RBP13.4□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Kcna6Q61923 529 aa13.4□□□□□ -0.26
Ldb3-202ENSMUST00000022328 RestQ8VIG1 1082 aa13.4□□□□□ -0.26
Ldb3-202ENSMUST00000022328 BcorQ8CGN4 1759 aa13.4□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Simc1E9Q6E9 1354 aa13.4□□□□□ -0.26
Ldb3-202ENSMUST00000022328 SlkO54988 1233 aa13.4□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Dhx16G3X8X0 1044 aaKnown RBP13.39□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Casq1O09165 405 aa13.39□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Bend3Q6PAL0 825 aa13.39□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Dzip1Q8BMD2 852 aa13.39□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Ier5O89113 308 aa13.39□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Mrps27Q8BK72 415 aaKnown RBP13.39□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Col15a1O35206 1367 aa13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Irf5P56477 497 aa13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Noc3lQ8VI84 807 aaKnown RBP13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Farp2Q91VS8 1065 aa13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Wnk3Q80XP9 1757 aa13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Hmox1P14901 289 aa13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Nol8Q3UHX0 1147 aaKnown RBP13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 PsapQ61207 557 aaKnown RBP13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Nol11Q8BJW5 723 aaKnown RBP13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Tmem119Q8R138 280 aa13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Irx6Q9ER75 438 aa13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Ripk4Q9ERK0 786 aa13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Phlpp1Q8CHE4 1687 aa13.38□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Fkbp4P30416 458 aa13.37□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Adcy9P51830 1353 aa13.37□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Cyp27a1Q9DBG1 533 aa13.37□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Zap70P43404 618 aa13.36□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Zfp91Q62511 572 aa13.36□□□□□ -0.27
Ldb3-202ENSMUST00000022328 MlecQ6ZQI3 291 aaKnown RBP13.36□□□□□ -0.27
Ldb3-202ENSMUST00000022328 TkfcQ8VC30 578 aa13.36□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Atp10bB1AWN4 1474 aa13.36□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Zkscan16A2ALW2 728 aa13.36□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Prune1Q8BIW1 454 aa13.36□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Rbm10Q99KG3 930 aaKnown RBP13.36□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Dmrtc1Q9D9R7 182 aa13.36□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Exoc6bA6H5Z3 810 aa13.35□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Evi5lH3BKQ3 813 aa13.35□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Pdia4P08003 638 aaKnown RBP13.35□□□□□ -0.27
Ldb3-202ENSMUST00000022328 CalcaP70160 136 aa13.35□□□□□ -0.27
Ldb3-202ENSMUST00000022328 GckrQ91X44 587 aa13.35□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Gm10471E9Q1C7 252 aa13.35□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Tpx2A2APB8 745 aaKnown RBP13.34□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Tlr7P58681 1050 aa13.34□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Flt4P35917 1363 aa13.34□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Cfdp1O88271 295 aaKnown RBP13.34□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Cct4P80315 539 aaKnown RBP13.34□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Stk11ipQ3TAA7 1072 aa13.34□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Dixdc1Q80Y83 711 aa13.34□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Zkscan1Q8BGS3 561 aaKnown RBP13.34□□□□□ -0.27
Ldb3-202ENSMUST00000022328 Pdzd9Q9D9M4 266 aa13.34□□□□□ -0.27
Ldb3-202ENSMUST00000022328 GnpatP98192 678 aa13.33□□□□□ -0.28
Ldb3-202ENSMUST00000022328 VgfQ0VGU4 617 aa13.33□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Gse1Q3U3C9 1213 aa13.33□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Mphosph10Q810V0 681 aaKnown RBP13.33□□□□□ -0.28
Ldb3-202ENSMUST00000022328 OptnQ8K3K8 584 aa13.33□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Taf7Q9R1C0 341 aa13.33□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Erbb4Q61527 1308 aa13.33□□□□□ -0.28
Ldb3-202ENSMUST00000022328 ThemisQ8BGW0 636 aa13.33□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Col18a1P39061 1774 aa13.33□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Anapc15P60007 132 aa13.32□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Map3k2Q61083 619 aa13.32□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Pdcl2Q78Y63 240 aa13.32□□□□□ -0.28
Ldb3-202ENSMUST00000022328 MccE9PWI3 1003 aa13.32□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Hsp90b1P08113 802 aaKnown RBP13.32□□□□□ -0.28
Ldb3-202ENSMUST00000022328 CrklP47941 303 aa13.32□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Slc4a10Q5DTL9 1118 aa13.32□□□□□ -0.28
Ldb3-202ENSMUST00000022328 HellsQ60848 821 aa13.32□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Bloc1s4Q8VED2 215 aa13.32□□□□□ -0.28
Ldb3-202ENSMUST00000022328 LlphQ9D945 130 aaKnown RBP13.32□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Tceal9Q9DD24 104 aa13.32□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Eif3aP23116 1344 aaKnown RBP13.31□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Card10P58660 1021 aa13.31□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Unc5clQ6R653 518 aa13.31□□□□□ -0.28
Ldb3-202ENSMUST00000022328 SympkQ80X82 1284 aa13.31□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Bag4Q8CI61 457 aa13.31□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Bcl2l13P59017 434 aa13.31□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Irf9Q61179 399 aa13.31□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Ccdc155Q80VJ8 648 aa13.31□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Tns2Q8CGB6 1400 aa13.3□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Gm21698A0A087WQP8 267 aa13.3□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Gm21671G3UY31 267 aa13.3□□□□□ -0.28
Ldb3-202ENSMUST00000022328 AnlnQ8K298 1121 aaKnown RBP13.3□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Phkg2Q9DB30 406 aa13.3□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Vwa3bJ9JI28 736 aa13.3□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Map3k13Q1HKZ5 959 aa13.3□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Atf3Q60765 181 aa13.3□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Tgfb1i1Q62219 461 aa13.3□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Mum1Q6DID5 682 aa13.3□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Lekr1B2RVN1 116 aa13.29□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Pdia6Q922R8 440 aaKnown RBP13.29□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Gtpbp6Q3U6U5 514 aa13.29□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Morc2aQ69ZX6 1030 aa13.29□□□□□ -0.28
Ldb3-202ENSMUST00000022328 DekQ7TNV0 380 aaKnown RBP13.29□□□□□ -0.28
Ldb3-202ENSMUST00000022328 Mknk2Q8CDB0 459 aa13.29□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 147.7 ms