RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ZDHHC21Q8IVQ6 265 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 OR6N2Q8NGY6 317 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 UBXN10Q96LJ8 280 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 ACSS3Q9H6R3 686 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 POU3F4P49335 361 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 RALGPS1Q5JS13 557 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 SPRYD7Q5W111 196 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 OR2T34Q8NGX1 318 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 OR2T3Q8NH03 318 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 TSACCQ96A04 125 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 NECAB3Q96P71 396 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 HSD17B14Q9BPX1 270 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 C7orf50Q9BRJ6 194 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 NMUR2Q9GZQ4 415 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 SMURF2Q9HAU4 748 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 NUDT4Q9NZJ9 180 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 PCDHB10Q9UN67 800 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 PCDH7O60245 1069 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 ZBTB48P10074 688 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 FXYD4P59646 89 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 FCRLBQ6BAA4 426 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 PHC2Q8IXK0 858 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 ACMSDQ8TDX5 336 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 LIN37Q96GY3 246 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 MED11Q9P086 117 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 A0A1B0GVM2 712 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 HSPB6O14558 160 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 CCR8P51685 355 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 TEAD2Q15562 447 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 TYSND1Q2T9J0 566 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 WSCD2Q2TBF2 565 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 GLYATL2Q8WU03 294 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 AP2A1O95782 977 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 POU2F2P09086 479 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 PXNP49023 591 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 HMGCS1Q01581 520 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 ILF2Q12905 390 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 NPRL3Q12980 569 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 TIGD6Q17RP2 521 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 FSTL4Q6MZW2 842 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 PDPRQ8NCN5 879 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 THAP6Q8TBB0 222 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 RFKQ969G6 155 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 NODALQ96S42 347 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 PHB2Q99623 299 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 SYT17Q9BSW7 474 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 WDR12Q9GZL7 423 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 KCNH6Q9H252 994 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 LHX5Q9H2C1 402 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 YJEFN3A6XGL0 299 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 CCRL2O00421 344 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 ADH5P11766 374 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 GP1BBP13224 206 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 PCBP1Q15365 356 aaKnown RBP eCLIP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 POC1BQ8TC44 478 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 TPSD1Q9BZJ3 242 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 POLR2J2Q9GZM3 115 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 POLE4Q9NR33 117 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 HOXB2P14652 356 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 RPS3AP61247 264 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 FGL1Q08830 312 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 Q6ZVU0 165 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 ERI1Q8IV48 349 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 MRPL38Q96DV4 380 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 FAM163AQ96GL9 167 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 TPPP3Q9BW30 176 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 AGXT2Q9BYV1 514 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 STXBP5LQ9Y2K9 1186 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 DUSP11O75319 330 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 LRCH4O75427 683 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 NXPH3O95157 252 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 CLCN4P51793 760 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 KRBOX4Q5JUW0 171 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 C6orf132Q5T0Z8 1188 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 SYCE2Q6PIF2 218 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 CROCCP3Q8IVE0 287 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 MATN3O15232 486 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 IDH3AP50213 366 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 BLKP51451 505 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 ZNF267Q14586 743 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 CHRFAM7AQ494W8 412 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 PIM3Q86V86 326 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 STRADBQ9C0K7 418 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 MAFBQ9Y5Q3 323 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 A0A1B0GVI7 797 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 RBM4BQ9BQ04 359 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 RBM4Q9BWF3 364 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 RNF32Q9H0A6 362 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 GLTPD2A6NH11 291 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 RNF225M0QZC1 329 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 B4GALT4O60513 344 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 NIPSNAP2O75323 286 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 CDKN2BP42772 138 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 CD97P48960 835 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 COL9A3Q14050 684 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 TIGD5Q53EQ6 642 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 RC3H2Q9HBD1 1191 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 S100A14Q9HCY8 104 aa16.48■□□□□ 0.23
CACNA1A-253ENST00000637927 MST1RQ04912 1400 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms