RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 GPC2Q8N158 579 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 ACBD4Q8NC06 268 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 ZNF439Q8NDP4 499 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 BTN2A3PQ96KV6 586 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 RTFDC1Q9BY42 306 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 PPA2Q9H2U2 334 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 PCDHB1Q9Y5F3 818 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 A0A1W2PQ45 241 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 A0A1W2PQY0 241 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 ZNF670-ZNF695F2Z2N8 137 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 SOX14O95416 240 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 GOT2P00505 430 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 GGT2P36268 569 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 GRB2P62993 217 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 MPPED2Q15777 294 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 ADGRD1Q6QNK2 874 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 ZDHHC21Q8IVQ6 265 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 DOK4Q8TEW6 326 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 HIPK2Q9H2X6 1198 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 SAR1AQ9NR31 198 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 UTS2RQ9UKP6 389 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 GGT3PA6NGU5 568 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 GLRA2P23416 452 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 PPP2CAP67775 309 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 SAMD11Q96NU1 681 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 LACRTQ9GZZ8 138 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 ZDHHC4Q9NPG8 344 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 TMEM184CQ9NVA4 438 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 TUBA8Q9NY65 449 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 ALPIP09923 528 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 RHBDL3P58872 404 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 UBE2NP61088 152 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 LYSMD3Q7Z3D4 306 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 C16orf78Q8WTQ4 265 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 ERVK-6Q9BXR3 956 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 TINAGL1Q9GZM7 467 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 TMEM98Q9Y2Y6 226 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 GMDSO60547 372 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 CLDN11O75508 207 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 KIAA0895Q8NCT3 520 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 OR2T27Q8NH04 317 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 RBM14Q96PK6 669 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 DUSP16Q9BY84 665 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 PTGES2Q9H7Z7 377 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 POLE4Q9NR33 117 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 CHD4Q14839 1912 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 RTCAO00442 366 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 TSPAN6O43657 245 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 TRMUO75648 421 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 OR4F21O95013 312 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 SHKBP1Q8TBC3 707 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 ATXN2LQ8WWM7 1075 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 LRTOMTQ8WZ04 291 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 SCLYQ96I15 445 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 ACO2Q99798 780 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 SLC35A5Q9BS91 424 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 GTF2IRD1Q9UHL9 959 aa15.41■□□□□ 0.06
CACNA1A-202ENST00000573710 TNS3Q68CZ2 1445 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 TCAF2A6NFQ2 919 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 H0YJX3 145 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 SLC16A5O15375 505 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 POP4O95707 220 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 RPL7AP62424 266 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 ABRAXAS2Q15018 415 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 TMEM214Q6NUQ4 689 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 BBS12Q6ZW61 710 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 COL21A1Q96P44 957 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 PORCNQ9H237 461 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 ITGB1BP2Q9UKP3 347 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 RBMS1P29558 406 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 ZNF81P51508 661 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 SCARB2Q14108 478 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 FAM174BQ3ZCQ3 159 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 USP43Q70EL4 1123 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 CPNE9Q8IYJ1 553 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 MARVELD2Q8N4S9 558 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 S100A16Q96FQ6 103 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 ZDHHC12Q96GR4 267 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 ZNF442Q9H7R0 627 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 OPN1SWP03999 348 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 HOXB9P17482 250 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 DECR1Q16698 335 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 C12orf40Q86WS4 652 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 DAGLBQ8NCG7 672 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 RNF32Q9H0A6 362 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 DPAGT1Q9H3H5 408 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 FKBPLQ9UIM3 349 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 UBE2J1Q9Y385 318 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 PCDHGB2Q9Y5G2 931 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 HDAC3O15379 428 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 CRXO43186 299 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 ARL16Q0P5N6 197 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 ILF2Q12905 390 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 GKN2Q86XP6 184 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 NLGN2Q8NFZ4 835 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 STYXQ8WUJ0 223 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 RSPRY1Q96DX4 576 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 IL21RQ9HBE5 538 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 PPP4R1LQ9P1A2 415 aa15.4■□□□□ 0.06
CACNA1A-202ENST00000573710 GLI2P10070 1586 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms