RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 HIST1H2AJQ99878 128 aa16.82■□□□□ 0.28
SHKBP1-227ENST00000602011 HAUS8Q9BT25 410 aa16.82■□□□□ 0.28
SHKBP1-227ENST00000602011 FAM167BQ9BTA0 163 aa16.82■□□□□ 0.28
SHKBP1-227ENST00000602011 H2AFJQ9BTM1 129 aa16.82■□□□□ 0.28
SHKBP1-227ENST00000602011 SARGQ9BW04 601 aa16.82■□□□□ 0.28
SHKBP1-227ENST00000602011 SYNPO2LQ9H987 977 aa16.82■□□□□ 0.28
SHKBP1-227ENST00000602011 KCNK13Q9HB14 408 aa16.82■□□□□ 0.28
SHKBP1-227ENST00000602011 PARVBQ9HBI1 364 aa16.82■□□□□ 0.28
SHKBP1-227ENST00000602011 MED16Q9Y2X0 877 aa16.82■□□□□ 0.28
SHKBP1-227ENST00000602011 ADGRG4Q8IZF6 3080 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 SLC19A2O60779 497 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 SEC24DO94855 1032 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 F10P00742 488 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 CELA2AP08217 269 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 ESRRAP11474 423 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 MST1P26927 711 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 HTR1EP28566 365 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 CSNK1G2P78368 415 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 ZNF549Q6P9A3 640 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 VN1R4Q7Z5H5 301 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 ANKRD37Q7Z713 158 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 ASPGQ86U10 573 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 EID3Q8N140 333 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 GIMAP7Q8NHV1 300 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 CD200R1Q8TD46 325 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 SLC13A3Q8WWT9 602 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 SLC30A3Q99726 388 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 AARSD1Q9BTE6 412 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 FBXO6Q9NRD1 293 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 C20orf96Q9NUD7 363 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 ABCF3Q9NUQ8 709 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 TAS2R13Q9NYV9 303 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 TRMT6Q9UJA5 497 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 FBXO5Q9UKT4 447 aa16.81■□□□□ 0.28
SHKBP1-227ENST00000602011 PABPN1LA6NDY0 278 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 MAGEB17A8MXT2 336 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 EEF1DP29692 281 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 MPP1Q00013 466 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 PWP1Q13610 501 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 CUL1Q13616 776 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 TRIP13Q15645 432 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 NSDHLQ15738 373 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 ZXDCQ2QGD7 858 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 CAPN13Q6MZZ7 669 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 LCTLQ6UWM7 567 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 PLD3Q8IV08 490 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 DENND6AQ8IWF6 608 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 MAGOHBQ96A72 148 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 GPR137Q96N19 417 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 SERPINB12Q96P63 405 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 LZTFL1Q9NQ48 299 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 ZNF835Q9Y2P0 537 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 CELSR1Q9NYQ6 3014 aa16.8■□□□□ 0.28
SHKBP1-227ENST00000602011 PKDREJQ9NTG1 2253 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 ASPDHA6ND91 283 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 TTC4O95801 387 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 COX6B1P14854 86 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 JAK1P23458 1154 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 CD96P40200 585 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 SLC1A2P43004 574 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 MAGEA3P43357 314 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 TBPL1P62380 186 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 ALDH6A1Q02252 535 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 TUBA3CQ13748 450 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 TUBA3EQ6PEY2 450 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 AGTRAPQ6RW13 159 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 Q6ZPB1 254 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 STRA8Q7Z7C7 330 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 SPPL2CQ8IUH8 684 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 CPNE9Q8IYJ1 553 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 BEST3Q8N1M1 668 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 MYO1HQ8N1T3 1032 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 MFSD9Q8NBP5 474 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 MDS2Q8NDY4 140 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 ABHD11Q8NFV4 315 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 ATL1Q8WXF7 558 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 SCMH1Q96GD3 660 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 MAGED4Q96JG8 741 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 PBKQ96KB5 322 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 NAT9Q9BTE0 207 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 SGPP1Q9BX95 441 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 TRIM54Q9BYV2 358 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 GPAMQ9HCL2 828 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 MAD1L1Q9Y6D9 718 aa16.79■□□□□ 0.28
SHKBP1-227ENST00000602011 SGK494L7N484 410 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 NRDCO43847 1150 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 HAUS5O94927 633 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 IL1RNP18510 177 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 VPS41P49754 854 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 CCR8P51685 355 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 AP1S2P56377 157 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 OR1C1Q15619 314 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 KIAA0408Q6ZU52 694 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 LANCL3Q6ZV70 420 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 PIWIL4Q7Z3Z4 852 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 SLC26A11Q86WA9 606 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 OR4K1Q8NGD4 311 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 GRK7Q8WTQ7 553 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 SIGLEC10Q96LC7 697 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms