RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 SLITRK4Q8IW52 837 aa11.6□□□□□ -0.55
NEK9-210ENST00000557026 PRSS58Q8IYP2 241 aa11.6□□□□□ -0.55
NEK9-210ENST00000557026 CLHC1Q8NHS4 586 aa11.6□□□□□ -0.55
NEK9-210ENST00000557026 C7orf43Q8WVR3 580 aa11.6□□□□□ -0.55
NEK9-210ENST00000557026 HLA-CQ95604 372 aa11.6□□□□□ -0.55
NEK9-210ENST00000557026 PTPN18Q99952 460 aa11.6□□□□□ -0.55
NEK9-210ENST00000557026 SACM1LQ9NTJ5 587 aa11.6□□□□□ -0.55
NEK9-210ENST00000557026 IGKV6-21A0A0C4DH24 114 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 ISPDA4D126 451 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 HTR3EA5X5Y0 456 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 M0QZQ0 153 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 PLD2O14939 933 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 KDM4BO94953 1096 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 SHBGP04278 402 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 PGRP06401 933 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 IRF2P14316 349 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 VLDLRP98155 873 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 PAQR3Q6TCH7 311 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 PLET1Q6UQ28 207 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 PLEKHG7Q6ZR37 379 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 OSTM1Q86WC4 334 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 GID4Q8IVV7 300 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 C2orf73Q8N5S3 287 aaPredicted RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 ZNF676Q8N7Q3 588 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 NDRG1Q92597 394 aaKnown RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 COQ8BQ96D53 544 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 METTL2AQ96IZ6 378 aaKnown RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 MKL2Q9ULH7 1088 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 CNOT6Q9ULM6 557 aaKnown RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 hCG_2014768A0A024R1R8 64 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 WTIPA6NIX2 430 aaPredicted RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 FOXE1O00358 373 aaPredicted RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 KHNYNO15037 678 aaKnown RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 IFNA21P01568 189 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 FHP07954 510 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 IL4RP24394 825 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 RRADP55042 308 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 SCN1BQ07699 218 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 ABHD17BQ5VST6 288 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 CYS1Q717R9 158 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.59□□□□□ -0.55
NEK9-210ENST00000557026 PROKR2Q8NFJ6 384 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 NINJ1Q92982 152 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 TRMT2BQ96GJ1 504 aaKnown RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 GPR174Q9BXC1 333 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 S100A14Q9HCY8 104 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 ENY2Q9NPA8 101 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 ARL5AQ9Y689 179 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 SNED1Q8TER0 1413 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 IDH3BO43837 385 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 METTL18O95568 372 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 OXSR1O95747 527 aaPredicted RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 FECHP22830 423 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 RORAP35398 523 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 ELF3P78545 371 aaPredicted RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 POU4F2Q12837 409 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 MALLQ13021 153 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 TUBA3CQ13748 450 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 EFR3AQ14156 821 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 GK5Q6ZS86 529 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 IQCKQ8N0W5 287 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 AUTS2Q8WXX7 1259 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 TUBA8Q9NY65 449 aaPredicted RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 PPP4R1LQ9P1A2 415 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 NPIPA2E9PIF3 369 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 NPIPA3F8WFD2 350 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 ANKRD28O15084 1053 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 EMC8O43402 210 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 DBTP11182 482 aaKnown RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 CSNK1DP48730 415 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 ACTC1P68032 377 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 ACTA1P68133 377 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 CDK6Q00534 326 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 OLFML2AQ68BL7 652 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 PYHIN1Q6K0P9 492 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 VASH1Q7L8A9 365 aaPredicted RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 ZNF572Q7Z3I7 529 aaPredicted RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 NPAS3Q8IXF0 933 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 UBE2J2Q8N2K1 259 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 TOR1AIP2Q8NFQ8 470 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 NMD3Q96D46 503 aaKnown RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 MARK4Q96L34 752 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 ZNF382Q96SR6 550 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 MCUBQ9NWR8 336 aa11.59□□□□□ -0.55
NEK9-210ENST00000557026 R3HDM2Q9Y2K5 976 aaKnown RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 NOP16Q9Y3C1 178 aaKnown RBP11.59□□□□□ -0.55
NEK9-210ENST00000557026 CLIC1O00299 241 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 OR2B3O76000 313 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 CLDN7O95471 211 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 IL33O95760 270 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 HK1P19367 917 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 NRF1Q16656 503 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 LIN52Q52LA3 116 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 CRB2Q5IJ48 1285 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 NAT8LQ8N9F0 302 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 BANPQ8N9N5 519 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 MCFD2Q8NI22 146 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 PPP1R35Q8TAP8 253 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 RDH12Q96NR8 316 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 SIX2Q9NPC8 291 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms