RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 CACNG6Q9BXT2 260 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 LRRN3Q9H3W5 708 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 IGFLR1Q9H665 355 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ARMT1Q9H993 441 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 MRPL44Q9H9J2 332 aaKnown RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 TMBIM4Q9HC24 238 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 SMURF1Q9HCE7 757 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 MLXIPLQ9NP71 852 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 CHST11Q9NPF2 352 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ZDHHC7Q9NXF8 308 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 NDUFAF4Q9P032 175 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 MGAT4CQ9UBM8 478 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 CHRNA9Q9UGM1 479 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 NDRG3Q9UGV2 375 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 GLS2Q9UI32 602 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 NAGKQ9UJ70 344 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 UTS2RQ9UKP6 389 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 MTO1Q9Y2Z2 717 aaKnown RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 COPG1Q9Y678 874 aaKnown RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 LMO7Q8WWI1 1683 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 SHANK3Q9BYB0 1731 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 GRID2IPA4D2P6 1211 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ARHGAP42A6NI28 874 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ERI2A8K979 691 aaKnown RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CDC7O00311 574 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 QSOX1O00391 747 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CCSO14618 274 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SLC16A3O15427 465 aaKnown RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 OR10H3O60404 316 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 FKTNO75072 461 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 IFNA2P01563 188 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 HEXAP06865 529 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CD19P15391 556 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 FGFR3P22607 806 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 AMPD1P23109 780 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ABCD3P28288 659 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 S100A7P31151 101 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 GRK4P32298 578 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 RPS5P46782 204 aaKnown RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CEBPGP53567 150 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SNAP25P60880 206 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 PPIGQ13427 754 aaKnown RBP eCLIP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 DLG2Q15700 870 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SLC15A2Q16348 729 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CARTPTQ16568 116 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 DUSP6Q16828 381 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 KIAA1755Q5JYT7 1200 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ADAMTSL4Q6UY14 1074 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 TFAP2EQ6VUC0 442 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SLC39A5Q6ZMH5 540 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SPRED1Q7Z699 444 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CATSPER3Q86XQ3 398 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 LGI2Q8N0V4 545 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 UBE2J2Q8N2K1 259 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 FAM89BQ8N5H3 189 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 DNAJC5GQ8N7S2 189 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 OR52E1Q8NGJ3 308 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 OR4A15Q8NGL6 344 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 BPIFB1Q8TDL5 484 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 FAM120BQ96EK7 910 aaKnown RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 RNF145Q96MT1 663 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 OR5M11Q96RB7 305 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ZSCAN10Q96SZ4 725 aaPredicted RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 DCUN1D5Q9BTE7 237 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 VCX2Q9H322 139 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 FOXP1Q9H334 677 aaPredicted RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ABCB10Q9NRK6 738 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 PLSCR3Q9NRY6 295 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 RIC8BQ9NVN3 520 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SLCO1C1Q9NYB5 712 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 TAB2Q9NYJ8 693 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ZNF214Q9UL59 606 aaPredicted RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CDH7Q9ULB5 785 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 POFUT2Q9Y2G5 429 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 PLEKHA6Q9Y2H5 1048 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 WIF1Q9Y5W5 379 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 BACE2Q9Y5Z0 518 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 RNF215Q9Y6U7 377 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 TP53BP1Q12888 1972 aaPredicted RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SPATA31A5Q5VU36 1347 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SPATA31A7Q8IWB4 1347 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ADGRA2Q96PE1 1338 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 PRAMEF27A3QJZ7 478 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 LINC00862A6NCI5 91 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 PRAMEF25A6NGN4 478 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 PRAMEF26H0Y7S4 382 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SYT5O00445 386 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 PRAMEF4O60810 478 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 PRAMEF11O60813 436 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 TAF5LO75529 589 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CALCAP01258 141 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SERPING1P05155 500 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 THP07101 528 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 RD3LP0DJH9 198 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 RNH1P13489 461 aaKnown RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ELNP15502 786 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 NME1P15531 152 aaKnown RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 POU1F1P28069 291 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ADH6P28332 368 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 RORAP35398 523 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms