RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 RASGRP3Q8IV61 690 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 PLPP6Q8IY26 295 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 TMEM145Q8NBT3 493 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 OR56A4Q8NGH8 313 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.37□□□□□ -0.43
HERC3-203ENST00000407637 FANK1Q8TC84 345 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 KIAA1191Q96A73 305 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 WBP1Q96G27 269 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 CXCL16Q9H2A7 254 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 PCDHB16Q9NRJ7 776 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 DUSP12Q9UNI6 340 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 KLF2Q9Y5W3 355 aaPredicted RBP12.37□□□□□ -0.43
HERC3-203ENST00000407637 TRBV5-3A0A0A0MS03 114 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 PRAMEF33A0A0G2JMD5 474 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 A0A1B0GVM2 712 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 A0A1W2PPL8 197 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 HAS3O00219 553 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 PRAMEF10O60809 474 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 PSIP1O75475 530 aaKnown RBP12.36□□□□□ -0.43
HERC3-203ENST00000407637 C1QCP02747 245 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 C9P02748 559 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 SLC2A4P14672 509 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 GABRB1P18505 474 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 F8A1P23610 371 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 STAT5BP51692 787 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 SMSP52788 366 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 C2orf80Q0P641 193 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 SLC14A1Q13336 389 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 PTPRCAPQ14761 206 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 SNAPC1Q16533 368 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 KLHL22Q53GT1 634 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 EIF3MQ7L2H7 374 aaKnown RBP12.36□□□□□ -0.43
HERC3-203ENST00000407637 ZNF551Q7Z340 670 aaPredicted RBP12.36□□□□□ -0.43
HERC3-203ENST00000407637 ZZZ3Q8IYH5 903 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 LIX1Q8N485 282 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 ATPAF2Q8N5M1 289 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 TRAPPC12Q8WVT3 735 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 SLC25A46Q96AG3 418 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 HSH2DQ96JZ2 352 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 ABHD16BQ9H3Z7 469 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 PLXNA1Q9UIW2 1896 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 COL16A1Q07092 1604 aaPredicted RBP12.36□□□□□ -0.43
HERC3-203ENST00000407637 PIPSLA2A3N6 862 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 ISM1B1AKI9 464 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 SYN3O14994 580 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 TREHO43280 583 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 HCN1O60741 890 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 AP2A2O94973 939 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 ESR1P03372 595 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 CKMT1AP12532 417 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 HOXB6P17509 224 aaKnown RBP12.36□□□□□ -0.43
HERC3-203ENST00000407637 LMO2P25791 158 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 AGFG1P52594 562 aaKnown RBP12.36□□□□□ -0.43
HERC3-203ENST00000407637 RABGGTBP53611 331 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 ITGA1P56199 1179 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 WNT3AP56704 352 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 P2RY14Q15391 338 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 SLC39A12Q504Y0 691 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 FAM209BQ5JX69 171 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 RTL4Q6ZR62 310 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 ADGRD2Q7Z7M1 963 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 ANKRD46Q86W74 232 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 METTL6Q8TCB7 284 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 FUBP1Q96AE4 644 aaKnown RBP12.36□□□□□ -0.43
HERC3-203ENST00000407637 MSLNLQ96KJ4 702 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 OR52E6Q96RD3 313 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 CDCA4Q9BXL8 241 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 MCOLN1Q9GZU1 580 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 CRISPLD1Q9H336 500 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 MFSD1Q9H3U5 465 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 RERGLQ9H628 205 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 SLAMF7Q9NQ25 335 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 IMPAD1Q9NX62 359 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 TAS2R7Q9NYW3 318 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 PLEKHB1Q9UF11 243 aaPredicted RBP12.36□□□□□ -0.43
HERC3-203ENST00000407637 FAM50BQ9Y247 325 aa12.36□□□□□ -0.43
HERC3-203ENST00000407637 NYNRINQ9P2P1 1898 aaKnown RBP12.36□□□□□ -0.43
HERC3-203ENST00000407637 ZNF646O15015 1829 aaPredicted RBP12.35□□□□□ -0.43
HERC3-203ENST00000407637 A0A0A6YYJ9 748 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 QSOX1O00391 747 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 AKAP8O43823 692 aaKnown RBP12.35□□□□□ -0.43
HERC3-203ENST00000407637 CCNDBP1O95273 360 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 SEMG1P04279 462 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 SCG5P05408 212 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 TXNP10599 105 aaKnown RBP12.35□□□□□ -0.43
HERC3-203ENST00000407637 NPR3P17342 541 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 RAB3AP20336 220 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 CYP4F8P98187 520 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 COL19A1Q14993 1142 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 CCDC85BQ15834 202 aaPredicted RBP12.35□□□□□ -0.43
HERC3-203ENST00000407637 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.35□□□□□ -0.43
HERC3-203ENST00000407637 STRIP1Q5VSL9 837 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 FRMPD2BQ6IN97 320 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 PAQR3Q6TCH7 311 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 ZNF600Q6ZNG1 722 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 OTOP2Q7RTS6 562 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 ZNF655Q8N720 491 aaPredicted RBP12.35□□□□□ -0.43
HERC3-203ENST00000407637 C3orf58Q8NDZ4 430 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 AGBL3Q8NEM8 1001 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms